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Shigella sp. D9, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05432043.1 ShiD9_010100004637 electron transport complex protein RnfC 1 1695 -1
CDS - ZP_05432044.1 ShiD9_010100004642 electron transport complex protein RnfB 1688 2266 -1
CDS - ZP_05432045.1 ShiD9_010100004647 Na(+)-translocating NADH-quinone reductase subunit E 2266 2847 -1
CDS - ZP_05432046.1 ShiD9_010100004652 hypothetical protein 2924 3364 -1
CDS - ZP_05432047.1 ShiD9_010100004657 oriC-binding nucleoid-associated protein 3450 3665 -1
CDS - ZP_05432048.1 ShiD9_010100004662 putative oxidoreductase 4306 5346 1
CDS - ZP_05432049.1 ShiD9_010100004667 adenosine deaminase 5381 6382 -1
CDS - ZP_05432050.1 ShiD9_010100004672 bifunctional beta-cystathionase, PLP-dependent and regulator of maltose regulon 6486 7658 -1
CDS - ZP_05432051.1 ShiD9_010100004677 bifunctional maltose and glucose-specific PTS system components IICB 7668 9260 -1
CDS - ZP_05432052.1 ShiD9_010100004682 DNA-binding transcriptional repressor MalI 9435 10463 1
CDS - ZP_05432053.1 ShiD9_010100004687 7-alpha-hydroxysteroid dehydrogenase 10575 11342 1
CDS - ZP_05432054.1 ShiD9_010100004692 DNA-binding transcriptional repressor 11563 12153 1
CDS - ZP_05432055.1 ShiD9_010100004697 beta-D-glucuronidase 12544 14355 1
CDS - ZP_05432056.1 ShiD9_010100004702 glucuronide transporter 14352 15725 1
CDS - ZP_05432057.1 ShiD9_010100004707 putative outer membrane porin protein 15764 17029 1
CDS - ZP_05432058.1 ShiD9_010100004712 hypothetical protein 17074 18582 -1
CDS - ZP_05432059.1 ShiD9_010100004717 mannose-6-phosphate isomerase 18683 19858 -1
CDS - ZP_05432060.1 ShiD9_010100004722 fumarate hydratase (fumarase A), aerobic Class I 20057 21703 1
CDS fumC ZP_05432061.1 ShiD9_010100004727 fumarate hydratase 21846 23249 1
CDS - ZP_05432062.1 ShiD9_010100004732 DNA replication terminus site-binding protein 23246 24175 -1
CDS - ZP_05432063.1 ShiD9_010100004737 sensor protein RstB 24251 25552 -1
CDS - ZP_05432064.1 ShiD9_010100004742 DNA-binding transcriptional regulator RstA 25556 26275 -1
CDS - ZP_05432065.1 ShiD9_010100004747 conserved inner membrane protein associated with alginate biosynthesis 26404 26739 1
CDS - ZP_05432066.1 ShiD9_010100004752 hypothetical protein 26703 26801 1
CDS - ZP_05432067.1 ShiD9_010100004757 short chain dehydrogenase 26736 27458 -1
CDS - ZP_05432068.1 ShiD9_010100004762 predicted arginine/ornithine antiporter transporter 27495 28877 -1
CDS - ZP_05432069.1 ShiD9_010100004767 hypothetical protein 29063 30007 -1
CDS pntA ZP_05432070.1 ShiD9_010100004772 NAD(P) transhydrogenase subunit alpha 30531 32063 1
CDS pntB ZP_05432071.1 ShiD9_010100004777 pyridine nucleotide transhydrogenase 32074 33462 1
CDS tqsA ZP_05432072.1 ShiD9_010100004782 putative transport protein 33487 34521 -1
CDS - ZP_05432073.1 ShiD9_010100004787 multidrug efflux system protein MdtJ 34933 35298 1
CDS - ZP_05432074.1 ShiD9_010100004792 multidrug efflux system protein MdtI 35285 35614 1
CDS - ZP_05432075.1 ShiD9_010100004797 hypothetical protein 35653 36474 -1
CDS - ZP_05432076.1 ShiD9_010100004802 hypothetical protein 36750 37085 -1
CDS - ZP_05432077.1 ShiD9_010100004807 putative transporter; MFS type 37482 38735 -1
CDS - ZP_05432078.1 ShiD9_010100004812 predicted DNA-binding transcriptional regulator 38842 39735 1
CDS - ZP_05432079.1 ShiD9_010100004817 DNA-binding transcriptional repressor 39870 41090 1
CDS - ZP_05432080.1 ShiD9_010100004822 putative dithiobiotin synthetase 41215 41910 1
CDS - ZP_05432081.1 ShiD9_010100004827 putative voltage-gated ClC-type chloride channel ClcB 41863 43119 -1
CDS - ZP_05432082.1 ShiD9_010100004832 twin-argninine leader-binding protein DmsD 43314 43928 -1
CDS - ZP_05432083.1 ShiD9_010100004837 oxidoreductase, membrane subunit 43971 44825 -1
CDS - ZP_05432084.1 ShiD9_010100004842 oxidoreductase, Fe-S subunit 44827 45444 -1
CDS - ZP_05432085.1 ShiD9_010100004847 putative dimethyl sulfoxide reductase major subunit 45455 47881 -1
CDS - ZP_05432086.1 ShiD9_010100004852 oxidoreductase subunit 47939 50365 -1
CDS - ZP_05432087.1 ShiD9_010100004857 hypothetical protein 50564 50869 -1
CDS - ZP_05432088.1 ShiD9_010100004862 hypothetical protein 50977 51687 1
CDS - ZP_05432089.1 ShiD9_010100004867 spermidine N1-acetyltransferase 51690 52250 -1
CDS - ZP_05432090.1 ShiD9_010100004872 hypothetical protein 52285 52626 -1
CDS - ZP_05432091.1 ShiD9_010100004877 hypothetical protein 52761 53087 1
CDS - ZP_05432092.1 ShiD9_010100004882 predicted dehydratase 53293 54507 1
CDS - ZP_05432093.1 ShiD9_010100004887 putative dehydrogenase 54519 55538 1
CDS - ZP_05432094.1 ShiD9_010100004892 putative transporter 55680 56963 1
CDS - ZP_05432095.1 ShiD9_010100004897 putative mannonate dehydrogenase 57052 58512 1
CDS - ZP_05432096.1 ShiD9_010100004902 hypothetical protein 58548 58751 -1
CDS - ZP_05432097.1 ShiD9_010100004907 predicted DNA-binding transcriptional regulator 58929 59615 -1
CDS - ZP_05432098.1 ShiD9_010100004912 3-hydroxy acid dehydrogenase 59704 60450 -1
CDS - ZP_05432099.1 ShiD9_010100004917 dipeptidyl carboxypeptidase II 60587 62632 1
CDS - ZP_05432100.1 ShiD9_010100004922 competence damage-inducible protein A 62677 63195 -1
CDS - ZP_05432101.1 ShiD9_010100004927 hypothetical protein 63471 63863 1
CDS - ZP_05432102.1 ShiD9_010100004932 hypothetical protein 64118 65008 1
CDS - ZP_05432103.1 ShiD9_010100004937 hypothetical protein 65227 65322 -1
CDS - ZP_05432104.1 ShiD9_010100004942 putative MFS-type transporter YdeE 65449 66636 -1
CDS - ZP_05432105.1 ShiD9_010100004947 O-acetylserine/cysteine export protein 66831 67730 1
CDS - ZP_05432106.1 ShiD9_010100004952 putative DNA-binding transcriptional regulator HTH family protein 67775 68473 -1
CDS - ZP_05432107.1 ShiD9_010100004957 putative cellobiose-specific phosphotransferase enzyme IIB component 68672 68983 1
CDS - ZP_05432108.1 ShiD9_010100004962 putative phosphotransferase system IIC component 69098 70420 1
CDS - ZP_05432109.1 ShiD9_010100004967 putative phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit 70448 70759 1
CDS - ZP_05432110.1 ShiD9_010100004972 putative carbohydrate-specific outer membrane porin 70815 72488 1
CDS celA ZP_05432111.1 ShiD9_010100004977 6-phospho-beta-glucosidase 72513 73952 1
CDS - ZP_05432112.1 ShiD9_010100004982 hypothetical protein 74009 74227 -1
CDS - ZP_05432113.1 ShiD9_010100004987 DNA-binding transcriptional activator MarA 74259 74642 -1
CDS - ZP_05432114.1 ShiD9_010100004992 DNA-binding transcriptional repressor MarR 74662 75096 -1
CDS - ZP_05432115.1 ShiD9_010100004997 multiple drug resistance protein MarC 75308 75973 1
CDS - ZP_05432116.1 ShiD9_010100005002 sugar efflux transporter 75998 77188 -1
CDS - ZP_05432117.1 ShiD9_010100005007 hypothetical protein 77338 78045 -1
CDS - ZP_05432118.1 ShiD9_010100005012 putative DNA-binding transcriptional regulator 78530 79411 -1
CDS - ZP_05432119.1 ShiD9_010100005017 putative succinate semialdehyde dehydrogenase 79512 80900 1
CDS - ZP_05432120.1 ShiD9_010100005022 glutaminase 80964 81890 1
CDS - ZP_05432121.1 ShiD9_010100005027 hypothetical protein 81890 82249 1
CDS - ZP_05432122.1 ShiD9_010100005032 diguanylate cyclase 82388 83806 1
CDS - ZP_05432123.1 ShiD9_010100005037 altronate oxidoreductase 84033 85484 1
CDS - ZP_05432124.1 ShiD9_010100005042 hypothetical protein 85691 85957 1
CDS - ZP_05432125.1 ShiD9_010100005047 conserved inner membrane protein 85957 86604 1
CDS - ZP_05432126.1 ShiD9_010100005052 trans-aconitate 2-methyltransferase 86608 87366 -1
CDS - ZP_05432127.1 ShiD9_010100005057 autoinducer-2 (AI-2) modifying protein LsrG 87423 87713 -1
CDS - ZP_05432128.1 ShiD9_010100005062 aldolase 87737 88612 -1
CDS - ZP_05432129.1 ShiD9_010100005067 AI2 transporter 88639 89661 -1
CDS - ZP_05432130.1 ShiD9_010100005072 AI2 transporter, membrane component of ABC superfamily protein 89673 90665 -1
CDS - ZP_05432131.1 ShiD9_010100005077 putative ABC transporter permease component 90665 91693 -1
CDS - ZP_05432132.1 ShiD9_010100005082 fused AI2 transporter subunits of ABC superfamily: ATP-binding components 91687 93222 -1
CDS - ZP_05432133.1 ShiD9_010100005087 lsr operon transcriptional repressor 93471 94424 1
CDS - ZP_05432134.1 ShiD9_010100005092 autoinducer-2 (AI-2) kinase 94503 96095 1
CDS - ZP_05432135.1 ShiD9_010100005097 putative lipoprotein 96764 102046 1
CDS - ZP_05432136.1 ShiD9_010100005102 DNA-binding transcriptional regulator HipB 102255 102521 1
CDS - ZP_05432137.1 ShiD9_010100005107 regulator with hipB 102521 103843 1
CDS - ZP_05432138.1 ShiD9_010100005112 predicted transcriptional regulator 104161 104340 1
CDS - ZP_05432139.1 ShiD9_010100005117 putative major fimbrial subunit FmlA 104795 105358 1
CDS - ZP_05432140.1 ShiD9_010100005122 Periplasmic chaperone precursor 105710 106429 1
CDS - ZP_05432141.1 ShiD9_010100005127 putative fimbrial usher protein 106525 109122 1
CDS - ZP_05432142.1 ShiD9_010100005132 putative fimbrial-like adhesin exported protein 109136 109666 1