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Shigella sp. D9, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05432215.1 ShiD9_010100005517 putative transposase ORF A (fragment), IS605 family protein 59 226 1
CDS - ZP_05432216.1 ShiD9_010100005522 putative lipoprotein 244 912 -1
CDS - ZP_05432217.1 ShiD9_010100005527 tellurite resistance protein TehB 1215 1808 -1
CDS - ZP_05432218.1 ShiD9_010100005532 potassium-tellurite ethidium and proflavin transporter 1805 2797 -1
CDS - ZP_05432219.1 ShiD9_010100005537 hypothetical protein 2921 3901 1
CDS - ZP_05432220.1 ShiD9_010100005542 ribosomal-protein-L7/L12-serine acetyltransferase 3896 4432 -1
CDS - ZP_05432221.1 ShiD9_010100005547 hypothetical protein 4495 4719 -1
CDS - ZP_05432222.1 ShiD9_010100005552 hypothetical protein 4735 4938 1
CDS mdoD ZP_05432223.1 ShiD9_010100005557 glucan biosynthesis protein D 4859 6478 -1
CDS - ZP_05432224.1 ShiD9_010100005562 hypothetical protein 6739 8082 -1
CDS - ZP_05432225.1 ShiD9_010100005567 putative transcriptional regulator 8158 9222 1
CDS - ZP_05432226.1 ShiD9_010100005572 methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor 9260 10900 -1
CDS - ZP_05432227.1 ShiD9_010100005577 small toxic polypeptide 11299 11448 1
CDS - ZP_05432228.1 ShiD9_010100005582 hypothetical protein 11520 11693 -1
CDS - ZP_05432229.1 ShiD9_010100005587 cytochrome b561 11938 12504 -1
CDS - ZP_05432230.1 ShiD9_010100005592 glyceraldehyde-3-phosphate dehydrogenase 12657 13658 1
CDS - ZP_05432231.1 ShiD9_010100005597 aldehyde dehydrogenase A 13700 15139 -1
CDS - ZP_05432232.1 ShiD9_010100005602 hypothetical protein 15336 16136 -1
CDS - ZP_05432233.1 ShiD9_010100005607 ATP-dependent RNA helicase HrpA 16408 20310 -1
CDS - ZP_05432234.1 ShiD9_010100005612 azoreductase 20511 21116 1
CDS - ZP_05432235.1 ShiD9_010100005617 putative dual specificity phosphatase 21167 22483 -1
CDS - ZP_05432236.1 ShiD9_010100005622 putative hydrolase 22473 24230 -1
CDS - ZP_05432237.1 ShiD9_010100005627 putative membrane associated CTP-phosphosubstrate transferase 24246 25142 -1
CDS - ZP_05432238.1 ShiD9_010100005632 hypothetical protein 25142 25747 -1
CDS - ZP_05432239.1 ShiD9_010100005637 hypothetical protein 25918 28224 -1
CDS - ZP_05432240.1 ShiD9_010100005642 putative oxidoreductase 28288 29148 -1
CDS - ZP_05432241.1 ShiD9_010100005647 putative hexapeptide repeat acetyltransferase 29378 29968 -1
CDS - ZP_05432242.1 ShiD9_010100005652 PaaX family transcriptional regulator 29950 30900 -1
CDS - ZP_05432243.1 ShiD9_010100005657 phenylacetyl-CoA ligase 31001 32314 -1
CDS - ZP_05432244.1 ShiD9_010100005662 beta-ketoadipyl CoA thiolase 32341 33546 -1
CDS - ZP_05432245.1 ShiD9_010100005667 putative thioesterase 33546 33968 -1
CDS - ZP_05432246.1 ShiD9_010100005672 3-hydroxy-acyl-CoA dehydrogenase 33958 35385 -1
CDS - ZP_05432247.1 ShiD9_010100005677 enoyl-CoA hydratase 35387 36175 -1
CDS - ZP_05432248.1 ShiD9_010100005682 enoyl-CoA hydratase-isomerase 36175 36942 -1
CDS - ZP_05432249.1 ShiD9_010100005687 subunit of the phenylacetly-CoA oxygenase/reductase 36939 38009 -1
CDS - ZP_05432250.1 ShiD9_010100005692 putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation 38017 38514 -1
CDS - ZP_05432251.1 ShiD9_010100005697 putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation 38529 39275 -1
CDS paaB ZP_05432252.1 ShiD9_010100005702 phenylacetate-CoA oxygenase subunit PaaB 39284 39571 -1
CDS paaA ZP_05432253.1 ShiD9_010100005707 phenylacetate-CoA oxygenase subunit PaaA 39583 40512 -1
CDS - ZP_05432254.1 ShiD9_010100005712 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase 40797 42842 1
CDS - ZP_05432255.1 ShiD9_010100005717 tyramine oxidase 43090 45363 1
CDS - ZP_05432256.1 ShiD9_010100005722 phenylacetaldehyde dehydrogenase 45421 46920 -1
CDS - ZP_05432257.1 ShiD9_010100005727 DNA-binding transcriptional activator FeaR 47156 48061 1
CDS - ZP_05432258.1 ShiD9_010100005732 hypothetical protein 48233 48559 -1
CDS - ZP_05432259.1 ShiD9_010100005737 predicted lipoprotein 48567 48752 -1
CDS - ZP_05432260.1 ShiD9_010100005742 hypothetical protein 48749 51388 -1
CDS - ZP_05432261.1 ShiD9_010100005747 fermentative D-lactate dehydrogenase, NAD-dependent 51596 52585 1
CDS - ZP_05432262.1 ShiD9_010100005752 heat-inducible protein 52696 53118 1
CDS - ZP_05432263.1 ShiD9_010100005757 hypothetical protein 53115 53381 -1
CDS - ZP_05432264.1 ShiD9_010100005762 putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein 53655 57179 1
CDS - ZP_05432265.1 ShiD9_010100005767 outer membrane pore protein N, non-specific 57545 58678 1
CDS - ZP_05432266.1 ShiD9_010100005772 putative filament protein 58819 59253 1
CDS - ZP_05432267.1 ShiD9_010100005777 C32 tRNA thiolase 59429 60364 1
CDS - ZP_05432268.1 ShiD9_010100005782 ATP-dependent RNA helicase DbpA 60493 61866 -1
CDS - ZP_05432269.1 ShiD9_010100005787 hypothetical protein 62241 62378 -1
CDS zntB ZP_05432270.1 ShiD9_010100005792 zinc transporter 62344 63327 -1
CDS - ZP_05432271.1 ShiD9_010100005797 putative diguanylate cyclase, GG[D/E]EF domain signalling protein 63582 64814 1
CDS - ZP_05432272.1 ShiD9_010100005802 hypothetical protein 64835 65398 -1
CDS - ZP_05432273.1 ShiD9_010100005807 putative DNA-binding transcriptional regulator 65728 66636 -1
CDS - ZP_05432274.1 ShiD9_010100005812 putative peptidase, para-aminobenzoyl-glutamate utilization protein 66812 68122 1
CDS - ZP_05432275.1 ShiD9_010100005817 putative peptidase, aminobenzoyl-glutamate utilization protein 68122 69567 1
CDS abgT ZP_05432276.1 ShiD9_010100005822 putative aminobenzoyl-glutamate transporter 69604 71130 1
CDS - ZP_05432277.1 ShiD9_010100005827 O-6-alkylguanine-DNA:cysteine-protein methyltransferase 71141 71656 1
CDS - ZP_05432278.1 ShiD9_010100005832 fumarate/nitrate reduction transcriptional regulator 71851 72603 1
CDS - ZP_05432279.1 ShiD9_010100005837 universal stress protein UspE 72755 73705 1
CDS - ZP_05432280.1 ShiD9_010100005842 predicted inner membrane protein 73755 74012 -1
CDS - ZP_05432281.1 ShiD9_010100005847 conserved inner membrane protein 74256 75287 1
CDS - ZP_05432282.1 ShiD9_010100005852 putative transport periplasmic protein 75338 76951 -1
CDS - ZP_05432283.1 ShiD9_010100005857 hypothetical protein 77074 77199 -1
CDS - ZP_05432284.1 ShiD9_010100005862 putative nucleic acid-binding regulator 77288 78187 -1
CDS - ZP_05432285.1 ShiD9_010100005867 putative hydrolase 78313 79245 1
CDS - ZP_05432286.1 ShiD9_010100005872 hypothetical protein 79245 80177 1
CDS - ZP_05432287.1 ShiD9_010100005877 hypothetical protein 80195 80833 1
CDS - ZP_05432288.1 ShiD9_010100005882 murein peptide amidase A 81142 81870 1
CDS - ZP_05432289.1 ShiD9_010100005887 putative muconate cycloisomerase I 81845 82810 -1
CDS tpx ZP_05432290.1 ShiD9_010100005892 thiol peroxidase 82929 83435 1
CDS - ZP_05432291.1 ShiD9_010100005897 DNA-binding transcriptional regulator TyrR 83479 85020 -1
CDS - ZP_05432292.1 ShiD9_010100005902 hypothetical protein 85168 86229 -1
CDS - ZP_05432293.1 ShiD9_010100005907 hypothetical protein 86226 87623 -1
CDS - ZP_05432294.1 ShiD9_010100005912 putative transcriptional regulator 87778 88776 1
CDS - ZP_05432295.1 ShiD9_010100005917 outer membrane porin 88887 89792 -1
CDS - ZP_05432296.1 ShiD9_010100005922 putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter 89837 90919 -1
CDS - ZP_05432297.1 ShiD9_010100005927 putative glucose-1-phosphate phosphodismutase, beta-phosphoglucomutase 90933 91592 -1
CDS - ZP_05432298.1 ShiD9_010100005932 putative glycosyl hydrolase/phosphorylase 91589 93856 -1
CDS - ZP_05432299.1 ShiD9_010100005937 predicted oxidoreductase, NADH-binding protein 93853 94896 -1
CDS - ZP_05432300.1 ShiD9_010100005942 predicted enzyme 94918 95706 -1
CDS - ZP_05432301.1 ShiD9_010100005947 predicted oxidoreductase, Zn-dependent and NAD(P)-binding protein 95724 96776 -1
CDS - ZP_05432302.1 ShiD9_010100005952 predicted sugar transporter subunit: membrane component of ABC superfamily protein 96807 97649 -1
CDS - ZP_05432303.1 ShiD9_010100005957 putative sugar transporter subunit: membrane component of ABC superfamily protein 97636 98517 -1
CDS - ZP_05432304.1 ShiD9_010100005962 putative sugar transporter subunit: periplasmic-binding component of ABC superfamily transporter 98538 99830 -1
CDS - ZP_05432305.1 ShiD9_010100005967 predicted glucosyltransferase 99844 101523 -1
CDS - ZP_05432306.1 ShiD9_010100005972 thiosulfate:cyanide sulfurtransferase 101735 102049 -1
CDS - ZP_05432307.1 ShiD9_010100005977 peripheral inner membrane phage-shock protein 102124 102345 -1
CDS - ZP_05432308.1 ShiD9_010100005982 DNA-binding transcriptional activator PspC 102354 102713 -1
CDS pspB ZP_05432309.1 ShiD9_010100005987 phage shock protein B 102713 102937 -1
CDS - ZP_05432310.1 ShiD9_010100005992 phage shock protein PspA 102991 103659 -1
CDS pspF ZP_05432311.1 ShiD9_010100005997 phage shock protein operon transcriptional activator 103826 104803 1
CDS - ZP_05432312.1 ShiD9_010100006002 4-aminobutyrate transaminase 104923 106188 -1
CDS - ZP_05432313.1 ShiD9_010100006007 gamma-Glu-putrescine oxidase, FAD/NAD(P)-binding protein 106226 107506 -1
CDS - ZP_05432314.1 ShiD9_010100006012 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase 107508 108995 -1