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Shigella sp. D9, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05432400.1 ShiD9_010100006444 2-dehydro-3-deoxyphosphooctonate aldolase 198 1052 -1
CDS - ZP_05432401.1 ShiD9_010100006449 putative transcriptional regulator 1088 1897 -1
CDS - ZP_05432402.1 ShiD9_010100006454 putative transcriptional regulator 1901 2293 -1
CDS - ZP_05432403.1 ShiD9_010100006459 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2290 3123 -1
CDS prfA ZP_05432404.1 ShiD9_010100006464 peptide chain release factor 1 3123 4205 -1
CDS hemA ZP_05432405.1 ShiD9_010100006469 glutamyl-tRNA reductase 4247 5503 -1
CDS lolB ZP_05432406.1 ShiD9_010100006474 outer membrane lipoprotein LolB 5717 6340 1
CDS ipk ZP_05432407.1 ShiD9_010100006479 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 6340 7191 1
CDS - ZP_05432408.1 ShiD9_010100006484 ribose-phosphate pyrophosphokinase 7276 8289 1
CDS - ZP_05432409.1 ShiD9_010100006489 putative sulfate transporter YchM 8414 10093 1
CDS - ZP_05432410.1 ShiD9_010100006494 hypothetical protein 10148 10426 -1
CDS - ZP_05432411.1 ShiD9_010100006499 peptidyl-tRNA hydrolase 10704 11288 1
CDS - ZP_05432412.1 ShiD9_010100006504 GTP-dependent nucleic acid-binding protein EngD 11405 12496 1
CDS - ZP_05432413.1 ShiD9_010100006509 hypothetical protein 12741 12920 -1
CDS - ZP_05432414.1 ShiD9_010100006524 DNA-binding transcriptional regulator DhaR 16278 18197 -1
CDS - ZP_05432415.1 ShiD9_010100006529 dihydroxyacetone kinase subunit DhaK 18425 19495 1
CDS - ZP_05432416.1 ShiD9_010100006534 dihydroxyacetone kinase ADP-binding subunit 19506 20138 1
CDS - ZP_05432417.1 ShiD9_010100006539 dihydroxyacetone kinase subunit M 20149 21567 1
CDS treA ZP_05432418.1 ShiD9_010100006544 trehalase 21887 23584 1
CDS - ZP_05432419.1 ShiD9_010100006549 hypothetical protein 23663 24103 -1
CDS - ZP_05432420.1 ShiD9_010100006554 putative inner membrane protein with transglycosylase-associated domain 24281 24535 -1
CDS - ZP_05432421.1 ShiD9_010100006559 protein involved in flagellar function 24736 25470 1
CDS - ZP_05432422.1 ShiD9_010100006564 murein transglycosylase E 25472 26083 -1
CDS ldcA ZP_05432423.1 ShiD9_010100006569 L,D-carboxypeptidase A 26183 27097 1
CDS - ZP_05432424.1 ShiD9_010100006574 potassium/proton antiporter 27192 28928 1
CDS dadX ZP_05432425.1 ShiD9_010100006579 alanine racemase 29314 30384 -1
CDS - ZP_05432426.1 ShiD9_010100006584 D-amino acid dehydrogenase small subunit 30394 31692 -1
CDS - ZP_05432427.1 ShiD9_010100006589 SpoVR family protein 32022 33554 1
CDS - ZP_05432428.1 ShiD9_010100006594 fatty acid metabolism regulator 33606 34325 -1
CDS nhaB ZP_05432429.1 ShiD9_010100006599 sodium/proton antiporter 34547 36088 1
CDS - ZP_05432430.1 ShiD9_010100006604 disulfide bond formation protein B 36234 36764 1
CDS umuC ZP_05432431.1 ShiD9_010100006609 DNA polymerase V subunit UmuC 36810 38078 -1
CDS - ZP_05432432.1 ShiD9_010100006614 DNA polymerase V subunit UmuD 38078 38497 -1
CDS hlyE ZP_05432433.1 ShiD9_010100006619 hemolysin E 38870 39379 1
CDS - ZP_05432434.1 ShiD9_010100006624 hemolysin E 39499 39711 1
CDS - ZP_05432435.1 ShiD9_010100006629 hypothetical protein 39986 40447 -1
CDS - ZP_05432436.1 ShiD9_010100006634 hypothetical protein 40524 41183 -1
CDS - ZP_05432437.1 ShiD9_010100006639 hypothetical protein 41255 41548 -1
CDS - ZP_05432438.1 ShiD9_010100006644 hypothetical protein 41790 42191 1
CDS - ZP_05432439.1 ShiD9_010100006649 hypothetical protein 42311 42679 -1
CDS minC ZP_05432440.1 ShiD9_010100006654 septum formation inhibitor 43199 43894 1
CDS - ZP_05432441.1 ShiD9_010100006659 cell division inhibitor MinD 43918 44730 1
CDS minE ZP_05432442.1 ShiD9_010100006664 cell division topological specificity factor MinE 44734 45000 1
CDS - ZP_05432443.1 ShiD9_010100006669 adhesin-like autotransporter 45372 45584 -1
CDS - ZP_05432444.1 ShiD9_010100006674 hypothetical protein 46352 46636 1
CDS - ZP_05432445.1 ShiD9_010100006679 hypothetical protein 46646 46975 1
CDS - ZP_05432446.1 ShiD9_010100006684 putative Outer membrane autotransporter barrel, putative pectin lyase fold protein 47032 49353 -1
CDS - ZP_05432447.1 ShiD9_010100006689 hypothetical protein 49470 49679 -1
CDS - ZP_05432448.1 ShiD9_010100006694 hypothetical protein 50079 50297 -1
CDS - ZP_05432449.1 ShiD9_010100006699 hypothetical protein 50429 51952 -1
CDS - ZP_05432450.1 ShiD9_010100006704 hypothetical protein 52284 52460 -1
CDS - ZP_05432451.1 ShiD9_010100006709 hypothetical protein 52645 52911 -1
CDS - ZP_05432452.1 ShiD9_010100006714 hypothetical protein 52940 53212 -1
CDS - ZP_05432453.1 ShiD9_010100006719 hypothetical protein 53255 53491 -1
CDS - ZP_05432454.1 ShiD9_010100006724 putative FAD-binding phosphodiesterase 53805 55016 1
CDS - ZP_05432455.1 ShiD9_010100006729 putative DNA-binding transcriptional regulator 55221 55952 1
CDS - ZP_05432456.1 ShiD9_010100006734 hypothetical protein 56173 56577 1
CDS - ZP_05432457.1 ShiD9_010100006739 hypothetical protein 57273 57596 1
CDS - ZP_05432458.1 ShiD9_010100006744 isocitrate dehydrogenase 57699 57851 -1
CDS - ZP_05432459.1 ShiD9_010100006749 e14 prophage; 5-methylcytosine-specific restriction endonuclease B 58097 58930 -1
CDS - ZP_05432460.1 ShiD9_010100006754 e14 prophage; site-specific DNA recombinase 59037 59591 -1
CDS - ZP_05432461.1 ShiD9_010100006759 alternative C-terminus of phage tail fiber protein, fused to tail fiber protein by inversion 59621 60117 1