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Shigella sp. D9, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05432862.1 ShiD9_010100008772 putative inner membrane protein, part of terminus 21 986 -1
CDS - ZP_05432863.1 ShiD9_010100008777 putative NAD(P)-binding dehydrogenase 1269 2273 -1
CDS - ZP_05432864.1 ShiD9_010100008782 putative thioredoxin-like protein 2334 3017 -1
CDS - ZP_05432865.1 ShiD9_010100008787 hypothetical protein 3094 3597 -1
CDS - ZP_05432866.1 ShiD9_010100008792 putative methyltransferase small domain 3682 4818 1
CDS - ZP_05432867.1 ShiD9_010100008797 hypothetical protein 4922 5092 1
CDS - ZP_05432868.1 ShiD9_010100008802 predicted DNA-binding transcriptional regulator 5089 5505 1
CDS - ZP_05432869.1 ShiD9_010100008807 2,4-dienoyl-CoA reductase, NADH and FMN-linked 5550 7568 -1
CDS - ZP_05432870.1 ShiD9_010100008812 putative glycosyl hydrolase 7894 10245 -1
CDS - ZP_05432871.1 ShiD9_010100008817 hypothetical protein 10262 11332 -1
CDS - ZP_05432872.1 ShiD9_010100008822 predicted transporter 11466 12899 -1
CDS ebgC ZP_05432873.1 ShiD9_010100008827 cryptic beta-D-galactosidase subunit beta 12962 13411 -1
CDS ebgA ZP_05432874.1 ShiD9_010100008832 cryptic beta-D-galactosidase subunit alpha 13408 16500 -1
CDS - ZP_05432875.1 ShiD9_010100008837 DNA-binding transcriptional repressor EbgR 16684 17667 -1
CDS - ZP_05432876.1 ShiD9_010100008842 hypothetical protein 17886 18218 1
CDS - ZP_05432877.1 ShiD9_010100008847 putrescine--2-oxoglutarate aminotransferase 18260 19549 -1
CDS - ZP_05432878.1 ShiD9_010100008852 fused signal transducer for aerotaxis sensory component ; methyl accepting chemotaxis component 20057 21577 1
CDS - ZP_05432879.1 ShiD9_010100008857 predicted transcriptional regulator 21731 22354 -1
CDS - ZP_05432880.1 ShiD9_010100008862 predicted siderophore interacting protein 22642 23406 1
tRNA - - ShiD9_010100t09169 tRNA-Met 23460 23535 -1
CDS - ZP_05432881.1 ShiD9_010100008867 G/U mismatch-specific DNA glycosylase 23660 24166 1
CDS - ZP_05432882.1 ShiD9_010100008872 RNA polymerase sigma factor RpoD 24245 26086 -1
CDS dnaG ZP_05432883.1 ShiD9_010100008877 DNA primase 26281 28026 -1
CDS rpsU ZP_05432884.1 ShiD9_010100008882 30S ribosomal protein S21 28137 28352 -1
CDS - ZP_05432885.1 ShiD9_010100008887 putative DNA-binding/iron metalloprotein/AP endonuclease 28589 29602 1
CDS - ZP_05432886.1 ShiD9_010100008892 putative tartrate:succinate antiporter 29645 31108 -1
CDS - ZP_05432887.1 ShiD9_010100008897 L(+)-tartrate dehydratase subunit beta 31156 31761 -1
CDS - ZP_05432888.1 ShiD9_010100008902 tartrate dehydratase subunit alpha 31758 32669 -1
CDS - ZP_05432889.1 ShiD9_010100008907 transcriptional activator TtdR 32876 33808 1
CDS - ZP_05432890.1 ShiD9_010100008912 putative glycerol-3-phosphate acyltransferase PlsY 33821 34438 -1
CDS folB ZP_05432891.1 ShiD9_010100008917 bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase 34543 34911 1
CDS - ZP_05432892.1 ShiD9_010100008922 undecaprenyl pyrophosphate phosphatase 35002 35823 1
CDS cca ZP_05432893.1 ShiD9_010100008927 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 35986 37224 -1
CDS - ZP_05432894.1 ShiD9_010100008932 putative signal transduction protein 37288 37908 -1
CDS - ZP_05432895.1 ShiD9_010100008937 putative adenylate cyclase 38150 39451 1
CDS - ZP_05432896.1 ShiD9_010100008942 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 39474 42314 1
CDS - ZP_05432897.1 ShiD9_010100008947 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 42362 43795 1
CDS - ZP_05432898.1 ShiD9_010100008952 hypothetical protein 43862 44254 -1
CDS - ZP_05432899.1 ShiD9_010100008957 hypothetical protein 44589 46250 -1
CDS - ZP_05432900.1 ShiD9_010100008962 hypothetical protein 46277 46906 -1
CDS - ZP_05432901.1 ShiD9_010100008967 glycogen synthesis protein GlgS 47175 47375 1
CDS - ZP_05432902.1 ShiD9_010100008982 putative fimbrial chaperone 48483 49232 -1
CDS - ZP_05432903.1 ShiD9_010100008987 outer membrane usher protein 49248 51752 -1
CDS - ZP_05432904.1 ShiD9_010100008992 putative fimbrial protein 51812 52363 -1
CDS - ZP_05432905.1 ShiD9_010100008997 hypothetical protein 52646 52996 -1
CDS ribB ZP_05432906.1 ShiD9_010100009002 3,4-dihydroxy-2-butanone 4-phosphate synthase 53310 53963 1
CDS - ZP_05432907.1 ShiD9_010100009007 hypothetical protein 54224 54394 1
CDS - ZP_05432908.1 ShiD9_010100009012 zinc transporter ZupT 54452 55225 -1
CDS - ZP_05432909.1 ShiD9_010100009017 hypothetical protein 55368 56156 1
CDS - ZP_05432910.1 ShiD9_010100009022 predicted enzyme 56194 57354 -1
CDS - ZP_05432911.1 ShiD9_010100009027 hypothetical protein 57360 58031 -1
CDS tolC ZP_05432912.1 ShiD9_010100009032 outer membrane channel protein 58179 59660 -1
CDS nudF ZP_05432913.1 ShiD9_010100009037 ADP-ribose pyrophosphatase NudF 59865 60494 1
CDS - ZP_05432914.1 ShiD9_010100009042 hypothetical protein 60495 60917 1
CDS - ZP_05432915.1 ShiD9_010100009047 cyclic 3',5'-adenosine monophosphate phosphodiesterase 60942 61769 1
CDS - ZP_05432916.1 ShiD9_010100009052 esterase YqiA 61769 62350 1
CDS - ZP_05432917.1 ShiD9_010100009057 DNA topoisomerase IV subunit B 62379 64271 1
CDS - ZP_05432918.1 ShiD9_010100009062 quinol monooxygenase 64319 64633 -1
CDS - ZP_05432919.1 ShiD9_010100009067 NADPH quinone reductase 64664 65245 -1
CDS - ZP_05432920.1 ShiD9_010100009072 hypothetical protein 65564 65896 1
CDS - ZP_05432921.1 ShiD9_010100009077 sensor protein QseC 65942 67291 -1
CDS - ZP_05432922.1 ShiD9_010100009082 DNA-binding transcriptional regulator QseB 67288 67947 -1
CDS - ZP_05432923.1 ShiD9_010100009087 hypothetical protein 68099 68491 1
CDS - ZP_05432924.1 ShiD9_010100009092 putative transcriptional regulator 68544 69026 1
CDS - ZP_05432925.1 ShiD9_010100009097 DNA topoisomerase IV subunit A 69572 71830 1
CDS - ZP_05432926.1 ShiD9_010100009102 1-acyl-sn-glycerol-3-phosphate acyltransferase 72063 72800 1
CDS - ZP_05432927.1 ShiD9_010100009107 repressor protein for FtsI 72875 74287 1
CDS - ZP_05432928.1 ShiD9_010100009112 hypothetical protein 74398 76617 1
CDS - ZP_05432929.1 ShiD9_010100009117 putative outer membrane lipoprotein 76660 76917 -1
CDS - ZP_05432930.1 ShiD9_010100009122 hypothetical protein 76968 77894 -1
CDS dkgA ZP_05432931.1 ShiD9_010100009127 2,5-diketo-D-gluconate reductase A 78094 78921 -1
CDS - ZP_05432932.1 ShiD9_010100009132 alcohol dehydrogenase, NAD(P)-dependent 79026 80189 -1
CDS - ZP_05432933.1 ShiD9_010100009137 hypothetical protein 80240 80386 1
CDS - ZP_05432934.1 ShiD9_010100009142 putative DNA-binding transcriptional regulator 80383 81282 1
CDS - ZP_05432935.1 ShiD9_010100009147 hypothetical protein 81344 81982 -1
CDS - ZP_05432936.1 ShiD9_010100009152 cystathionine beta-lyase 82122 83309 -1
CDS - ZP_05432937.1 ShiD9_010100009157 biopolymer transport protein ExbB 83561 84295 1
CDS - ZP_05432938.1 ShiD9_010100009162 biopolymer transport protein ExbD 84302 84727 1