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Shigella sp. D9, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05433164.1 ShiD9_010100010306 hypothetical protein 82 825 1
CDS - ZP_05433165.1 ShiD9_010100010311 6-phospho-beta-glucosidase A 882 2315 -1
CDS - ZP_05433166.1 ShiD9_010100010316 hypothetical protein 2360 2671 1
CDS - ZP_05433167.1 ShiD9_010100010321 predicted oxidoreductase, inner membrane subunit 2835 3494 1
CDS - ZP_05433168.1 ShiD9_010100010326 putative global regulator 3571 4551 -1
CDS - ZP_05433169.1 ShiD9_010100010331 hypothetical protein 4628 4819 -1
CDS - ZP_05433170.1 ShiD9_010100010336 hypothetical protein 4794 5060 1
CDS - ZP_05433171.1 ShiD9_010100010341 hypothetical protein 5041 5448 1
CDS - ZP_05433172.1 ShiD9_010100010346 flavodoxin FldB 5488 6009 -1
CDS xerD ZP_05433173.1 ShiD9_010100010351 site-specific tyrosine recombinase XerD 6121 7017 1
CDS - ZP_05433174.1 ShiD9_010100010356 thiol:disulfide interchange protein DsbC 7042 7752 1
CDS - ZP_05433175.1 ShiD9_010100010361 ssDNA exonuclease RecJ 7758 9491 1
CDS prfB ZP_05433176.1 ShiD9_010100010366 peptide chain release factor 2 9799 10680 1
CDS lysS ZP_05433177.1 ShiD9_010100010371 lysyl-tRNA synthetase 10690 12207 1
CDS - ZP_05433178.1 ShiD9_010100010376 isopentenyl-diphosphate delta-isomerase 12250 12798 -1
CDS - ZP_05433179.1 ShiD9_010100010381 hypothetical protein 12921 13058 -1
CDS - ZP_05433180.1 ShiD9_010100010386 predicted transporter 13048 14496 -1
CDS - ZP_05433181.1 ShiD9_010100010391 putative oxidoreductase Fe-S binding subunit 14932 16851 1
CDS - ZP_05433182.1 ShiD9_010100010396 putative oxidoreductase 16851 17339 1
CDS - ZP_05433183.1 ShiD9_010100010401 predicted transporter 17375 18742 -1
CDS - ZP_05433184.1 ShiD9_010100010406 guanine deaminase 18778 20094 -1
CDS - ZP_05433185.1 ShiD9_010100010411 putative transporter 20112 21512 -1
CDS - ZP_05433186.1 ShiD9_010100010416 putative selenate reductase subunit YgfN 21677 24547 -1
CDS - ZP_05433187.1 ShiD9_010100010421 putative selenate reductase subunit YgfM 24544 25323 -1
CDS - ZP_05433188.1 ShiD9_010100010426 putative chlorohydrolase/aminohydrolase 25374 26702 -1
CDS - ZP_05433189.1 ShiD9_010100010431 putative selenate reductase subunit YgfK 26705 29803 -1
CDS - ZP_05433190.1 ShiD9_010100010436 hypothetical protein 30125 30703 -1
CDS - ZP_05433191.1 ShiD9_010100010441 hypothetical protein 30806 31576 1
CDS - ZP_05433192.1 ShiD9_010100010446 hypothetical protein 31624 33249 1
CDS - ZP_05433193.1 ShiD9_010100010451 carbamate kinase 33290 34222 -1
CDS - ZP_05433194.1 ShiD9_010100010456 phenylhydantoinase 34270 35655 -1
CDS - ZP_05433195.1 ShiD9_010100010461 peptidase 35708 36919 -1
CDS - ZP_05433196.1 ShiD9_010100010466 diaminopropionate ammonia-lyase 36977 38173 -1
CDS - ZP_05433197.1 ShiD9_010100010471 aspartate/ornithine carbamoyltransferase family protein 38231 39418 -1
CDS - ZP_05433198.1 ShiD9_010100010476 putative DNA-binding transcriptional regulator 39897 41675 1
CDS - ZP_05433199.1 ShiD9_010100010481 xanthine dehydrogenase subunit XdhC 41715 42194 -1
CDS - ZP_05433200.1 ShiD9_010100010486 xanthine dehydrogenase subunit XdhB 42191 43069 -1
CDS - ZP_05433201.1 ShiD9_010100010491 xanthine dehydrogenase subunit XdhA 43080 45377 -1
CDS - ZP_05433202.1 ShiD9_010100010496 Tetratricopeptide repeat transcriptional regulator 45792 46547 1
tRNA - - ShiD9_010100t10793 tRNA-Gly 46626 46699 1
CDS - ZP_05433203.1 ShiD9_010100010501 hypothetical protein 46933 48543 1
CDS spaP ZP_05433204.1 ShiD9_010100010516 surface presentation of antigens protein SpaP 49612 50274 1
CDS - ZP_05433205.1 ShiD9_010100010521 type III secretion apparatus protein 50284 50544 1
CDS - ZP_05433206.1 ShiD9_010100010526 putative Type III secretion protein EpaR 50546 51313 1
CDS - ZP_05433207.1 ShiD9_010100010531 surface presentation of antigens protein SpaS 51322 52053 1
CDS - ZP_05433208.1 ShiD9_010100010536 surface presentation of antigens protein SpaS 52050 52442 1
CDS - ZP_05433209.1 ShiD9_010100010541 hypothetical protein 52503 52796 -1
CDS - ZP_05433210.1 ShiD9_010100010546 hypothetical protein 52867 53298 -1
CDS - ZP_05433211.1 ShiD9_010100010551 Putative Type III secretion EprH protein 53556 54737 1
CDS - ZP_05433212.1 ShiD9_010100010556 Putative Type III secretion EprI protein 54751 54906 1
CDS - ZP_05433213.1 ShiD9_010100010561 hypothetical protein 55011 55298 1
CDS - ZP_05433214.1 ShiD9_010100010566 Putative Type III secretion system lipoprotein EprK 55339 56073 1
CDS - ZP_05433215.1 ShiD9_010100010571 hypothetical protein 56089 56670 1
CDS - ZP_05433216.1 ShiD9_010100010576 hypothetical protein 57108 57317 1
CDS - ZP_05433217.1 ShiD9_010100010591 putative peptidoglycan-binding-like protein precursor 58215 58589 -1
CDS - ZP_05433218.1 ShiD9_010100010596 transcriptional regulator 59161 60537 -1
CDS - ZP_05433219.1 ShiD9_010100010601 putative chaperone 60871 61362 -1
CDS - ZP_05433220.1 ShiD9_010100010606 hypothetical protein 62729 62809 1
CDS - ZP_05433221.1 ShiD9_010100010611 hypothetical protein 62842 63324 -1
CDS - ZP_05433222.1 ShiD9_010100010616 predicted transcriptional regulator 63317 64126 -1
CDS - ZP_05433223.1 ShiD9_010100010621 hypothetical protein 64459 65091 -1
CDS - ZP_05433224.1 ShiD9_010100010626 predicted transporter 65551 66780 -1
CDS - ZP_05433225.1 ShiD9_010100010631 acetyl-CoA acetyltransferase 67035 68216 1
CDS - ZP_05433226.1 ShiD9_010100010636 5-keto-4-deoxyuronate isomerase 68503 69339 1
CDS - ZP_05433227.1 ShiD9_010100010641 2-deoxy-D-gluconate 3-dehydrogenase 69369 70130 1
CDS - ZP_05433228.1 ShiD9_010100010646 arabinose transporter 70445 71863 1
CDS - ZP_05433229.1 ShiD9_010100010651 putative racemase 71992 72684 1
CDS - ZP_05433230.1 ShiD9_010100010656 DNA-binding transcriptional regulator LysR 72671 73606 -1
CDS - ZP_05433231.1 ShiD9_010100010661 diaminopimelate decarboxylase 73728 74990 1
CDS - ZP_05433232.1 ShiD9_010100010666 DNA-binding transcriptional regulator GalR 74997 76028 -1
CDS - ZP_05433233.1 ShiD9_010100010671 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase 76613 78772 1
CDS - ZP_05433234.1 ShiD9_010100010676 lysophospholipid transporter LplT 78765 79958 1
CDS tas ZP_05433235.1 ShiD9_010100010681 putative aldo-keto reductase 79990 81030 -1
CDS - ZP_05433236.1 ShiD9_010100010686 hypothetical protein 81138 81356 -1
CDS - ZP_05433237.1 ShiD9_010100010691 predicted inner membrane protein 81494 82207 -1
CDS - ZP_05433238.1 ShiD9_010100010696 DNA mismatch repair protein 82276 82965 -1
CDS - ZP_05433239.1 ShiD9_010100010701 dinucleoside polyphosphate hydrolase 83650 84180 1
CDS - ZP_05433240.1 ShiD9_010100010706 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain 84193 86439 1
CDS - ZP_05433241.1 ShiD9_010100010711 prolipoprotein diacylglyceryl transferase 86590 87465 1
CDS thyA ZP_05433242.1 ShiD9_010100010716 thymidylate synthase 87472 88266 1
CDS - ZP_05433243.1 ShiD9_010100010721 hypothetical protein 88451 88921 1
CDS - ZP_05433244.1 ShiD9_010100010726 hypothetical protein 88912 89475 1
CDS - ZP_05433245.1 ShiD9_010100010731 hypothetical protein 89472 89879 1
CDS - ZP_05433246.1 ShiD9_010100010736 hypothetical protein 89864 90187 1
CDS recC ZP_05433247.1 ShiD9_010100010741 exonuclease V subunit gamma 90200 93568 1
CDS - ZP_05433248.1 ShiD9_010100010746 protease III 93744 96632 1
CDS recB ZP_05433249.1 ShiD9_010100010751 exonuclease V subunit beta 96625 100167 1
CDS recD ZP_05433250.1 ShiD9_010100010756 exonuclease V subunit alpha 100167 101993 1
CDS - ZP_05433251.1 ShiD9_010100010761 N-acetylglutamate synthase 102055 103386 -1
CDS - ZP_05433252.1 ShiD9_010100010766 putative amidase 103618 104871 1
CDS - ZP_05433253.1 ShiD9_010100010771 hypothetical protein 105217 105765 -1
CDS - ZP_05433254.1 ShiD9_010100010776 hypothetical protein 105830 108094 -1
CDS - ZP_05433255.1 ShiD9_010100010781 hypothetical protein 108655 109077 -1
CDS - ZP_05433256.1 ShiD9_010100010786 hypothetical protein 109070 110457 -1