xBASE Logo
About | Contact | Home

Shigella sp. D9, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05433453.1 ShiD9_010100011785 hypothetical protein 105 548 -1
CDS - ZP_05433454.1 ShiD9_010100011790 homoserine O-succinyltransferase 705 1634 1
CDS - ZP_05433455.1 ShiD9_010100011795 malate synthase 1903 3504 1
CDS - ZP_05433456.1 ShiD9_010100011800 isocitrate lyase 3534 4838 1
CDS aceK ZP_05433457.1 ShiD9_010100011805 bifunctional isocitrate dehydrogenase kinase/phosphatase protein 5119 6855 1
CDS - ZP_05433458.1 ShiD9_010100011810 ShET2 enterotoxin domain-containing protein 7177 8397 -1
CDS - ZP_05433459.1 ShiD9_010100011815 transcriptional repressor IclR 8715 9539 -1
CDS metH ZP_05433460.1 ShiD9_010100011820 B12-dependent methionine synthase 9739 13422 1
CDS - ZP_05433461.1 ShiD9_010100011825 predicted transporter 13717 15273 1
CDS - ZP_05433462.1 ShiD9_010100011830 peptidase E 15364 16053 -1
CDS - ZP_05433463.1 ShiD9_010100011835 putative L-sorbose-1-P-reductase 16436 17665 -1
CDS - ZP_05433464.1 ShiD9_010100011840 sorbose permease IID component 17717 18541 -1
CDS - ZP_05433465.1 ShiD9_010100011845 putative sorbose-permease PTS system IIC component 18552 19349 -1
CDS - ZP_05433466.1 ShiD9_010100011850 sorbose-specific phosphotransferase enzyme IIB component (PTS system) 19415 19909 -1
CDS - ZP_05433467.1 ShiD9_010100011855 putative sorbose-permease PTS system IIA component 19909 20316 -1
CDS - ZP_05433468.1 ShiD9_010100011860 sorbitol-6-phosphate 2-dehydrogenase 20326 21132 -1
CDS - ZP_05433469.1 ShiD9_010100011865 sorbitol/sorbose operon activator 21202 22149 -1
CDS - ZP_05433470.1 ShiD9_010100011870 23S rRNA pseudouridine synthase F 22497 23369 1
CDS - ZP_05433471.1 ShiD9_010100011875 hypothetical protein 23370 23642 -1
CDS - ZP_05433472.1 ShiD9_010100011880 hypothetical protein 24171 25298 1
CDS - ZP_05433473.1 ShiD9_010100011885 hypothetical protein 25304 26095 1
CDS - ZP_05433474.1 ShiD9_010100011890 putative zeta toxin; poison-antidote element 26131 27057 -1
CDS - ZP_05433475.1 ShiD9_010100011895 aspartate kinase III 27202 28551 -1
CDS pgi ZP_05433476.1 ShiD9_010100011900 glucose-6-phosphate isomerase 29076 30725 1
CDS - ZP_05433477.1 ShiD9_010100011905 hypothetical protein 31080 31322 1
CDS - ZP_05433478.1 ShiD9_010100011910 hypothetical protein 31436 32074 1
CDS - ZP_05433479.1 ShiD9_010100011915 hypothetical protein 32071 32808 1
CDS - ZP_05433480.1 ShiD9_010100011920 hypothetical protein 32808 34904 1
CDS - ZP_05433481.1 ShiD9_010100011925 hypothetical protein 35245 35373 1
CDS - ZP_05433482.1 ShiD9_010100011930 phosphate-starvation-inducible protein PsiE 35499 35909 1
CDS xylE ZP_05433483.1 ShiD9_010100011935 D-xylose transporter XylE 35953 37428 -1
CDS malG ZP_05433484.1 ShiD9_010100011940 maltose transporter permease 37800 38690 -1
CDS malF ZP_05433485.1 ShiD9_010100011945 maltose transporter membrane protein 38705 40249 -1
CDS malE ZP_05433486.1 ShiD9_010100011950 maltose ABC transporter periplasmic protein 40403 41593 -1
CDS - ZP_05433487.1 ShiD9_010100011955 hypothetical protein 41686 41781 -1
CDS - ZP_05433488.1 ShiD9_010100011960 maltose/maltodextrin transporter ATP-binding protein 41958 43073 1
CDS lamB ZP_05433489.1 ShiD9_010100011965 maltoporin 43145 44485 1
CDS - ZP_05433490.1 ShiD9_010100011970 maltose regulon periplasmic protein 44728 45648 1
CDS - ZP_05433491.1 ShiD9_010100011975 hypothetical protein 45877 46071 1
CDS - ZP_05433492.1 ShiD9_010100011980 hypothetical protein 46129 47457 1
CDS ubiC ZP_05433493.1 ShiD9_010100011985 chorismate pyruvate lyase 47680 48177 1
CDS ubiA ZP_05433494.1 ShiD9_010100011990 4-hydroxybenzoate octaprenyltransferase 48190 49062 1
CDS - ZP_05433495.1 ShiD9_010100011995 glycerol-3-phosphate acyltransferase 49217 51640 -1
CDS - ZP_05433496.1 ShiD9_010100012000 diacylglycerol kinase 51811 52179 1
CDS - ZP_05433497.1 ShiD9_010100012005 LexA repressor 52289 52897 1
CDS - ZP_05433498.1 ShiD9_010100012010 DNA-damage-inducible SOS response protein 52970 54295 1
CDS - ZP_05433499.1 ShiD9_010100012015 putative stress-response protein 54411 54620 1
CDS - ZP_05433500.1 ShiD9_010100012020 zinc uptake transcriptional repressor 54662 55177 -1
CDS - ZP_05433501.1 ShiD9_010100012025 hypothetical protein 55495 56511 1
CDS - ZP_05433502.1 ShiD9_010100012030 tRNA-dihydrouridine synthase A 56874 56996 1
CDS - ZP_05433503.1 ShiD9_010100012035 hypothetical protein 57122 57658 1
CDS - ZP_05433504.1 ShiD9_010100012040 hypothetical protein 57855 58028 1
CDS - ZP_05433505.1 ShiD9_010100012045 hypothetical protein 58076 58357 -1
CDS - ZP_05433506.1 ShiD9_010100012050 phage protein 58394 58966 -1
CDS - ZP_05433507.1 ShiD9_010100012055 hypothetical protein 58966 59514 -1
CDS - ZP_05433508.1 ShiD9_010100012060 hypothetical protein 59516 60436 -1
CDS - ZP_05433509.1 ShiD9_010100012065 hypothetical protein 60433 60672 -1
CDS - ZP_05433510.1 ShiD9_010100012070 hypothetical protein 60665 60868 -1
CDS - ZP_05433511.1 ShiD9_010100012075 hypothetical protein 60865 61227 -1
CDS - ZP_05433512.1 ShiD9_010100012080 hypothetical protein 61218 61754 -1
CDS - ZP_05433513.1 ShiD9_010100012085 hypothetical protein 61883 62707 -1
CDS - ZP_05433514.1 ShiD9_010100012090 hypothetical protein 62773 63135 -1
CDS - ZP_05433515.1 ShiD9_010100012095 hypothetical protein 63326 63424 1
CDS - ZP_05433516.1 ShiD9_010100012100 ATPase domain protein 64068 65153 -1
CDS - ZP_05433517.1 ShiD9_010100012105 phage reprossor 65388 66092 -1
CDS - ZP_05433518.1 ShiD9_010100012110 hypothetical protein 66199 66462 1
CDS - ZP_05433519.1 ShiD9_010100012115 hypothetical protein 66380 67075 1
CDS - ZP_05433520.1 ShiD9_010100012120 hypothetical protein 67072 67410 1
CDS - ZP_05433521.1 ShiD9_010100012125 putative phage replication protein O 67420 68361 1
CDS - ZP_05433522.1 ShiD9_010100012130 hypothetical protein 68358 68852 1
CDS - ZP_05433523.1 ShiD9_010100012135 putative phage AdoMet-dependent methyltransferase 68852 69505 1
CDS - ZP_05433524.1 ShiD9_010100012140 putative LexA repressor 69502 69828 1
CDS - ZP_05433525.1 ShiD9_010100012145 Crossover junction endodeoxyribonuclease 69825 70214 1
CDS - ZP_05433526.1 ShiD9_010100012150 hypothetical protein 70234 71043 1
CDS - ZP_05433527.1 ShiD9_010100012155 hypothetical protein 71045 72040 1
CDS - ZP_05433528.1 ShiD9_010100012160 putative antitermination protein Q; Qin prophage 72054 72806 1
CDS - ZP_05433529.1 ShiD9_010100012165 Holin 73469 73810 1
CDS - ZP_05433530.1 ShiD9_010100012170 Lysozyme (Lysis protein) (Muramidase) (Endolysin) 73814 74290 1
CDS - ZP_05433531.1 ShiD9_010100012175 putative Rz lytic protein from phage origin, putative coiled-coil 74274 74666 1
CDS - ZP_05433532.1 ShiD9_010100012180 putative Rz1 lytic protein from bacteriophage origin 74635 74826 1
CDS - ZP_05433533.1 ShiD9_010100012185 hypothetical protein 75021 75272 -1
CDS - ZP_05433534.1 ShiD9_010100012190 HNH endonuclease 75312 75662 1
CDS - ZP_05433535.1 ShiD9_010100012195 putative phage terminase, small subunit, P27 family protein 75788 76282 1
CDS - ZP_05433536.1 ShiD9_010100012200 hypothetical protein 76279 78012 1
CDS - ZP_05433537.1 ShiD9_010100012205 hypothetical protein 78024 78206 1
CDS - ZP_05433538.1 ShiD9_010100012210 putative phage portal protein 78206 79447 1
CDS - ZP_05433539.1 ShiD9_010100012215 putative phage pro-head protease 79425 80075 1
CDS - ZP_05433540.1 ShiD9_010100012220 putative major capsid protein 80090 81295 1
CDS - ZP_05433541.1 ShiD9_010100012225 hypothetical protein 81345 81545 1
CDS - ZP_05433542.1 ShiD9_010100012230 hypothetical protein 81548 81871 1
CDS - ZP_05433543.1 ShiD9_010100012235 putative phage head-tail adaptor 81868 82278 1
CDS - ZP_05433544.1 ShiD9_010100012240 putative bacteriophage protein 82253 82759 1
CDS - ZP_05433545.1 ShiD9_010100012245 putative bacteriophage protein 82756 83316 1
CDS - ZP_05433546.1 ShiD9_010100012250 hypothetical protein 83325 83495 1
CDS - ZP_05433547.1 ShiD9_010100012255 Tail sheath protein 83479 84975 1
CDS - ZP_05433548.1 ShiD9_010100012260 putative phage tail protein 84975 85331 1
CDS - ZP_05433549.1 ShiD9_010100012265 hypothetical protein 85328 85651 1
CDS - ZP_05433550.1 ShiD9_010100012270 putative phage tail tape measure protein 85736 87637 1
CDS - ZP_05433551.1 ShiD9_010100012275 hypothetical protein 87702 88190 1
CDS - ZP_05433552.1 ShiD9_010100012280 Tail/DNA circulation protein 88247 89620 1