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Shigella sp. D9, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05434590.1 ShiD9_010100017550 hypothetical protein 1 749 -1
CDS - ZP_05434591.1 ShiD9_010100017555 hypothetical protein 833 1195 -1
CDS - ZP_05434592.1 ShiD9_010100017560 hypothetical protein 1212 2117 -1
CDS - ZP_05434593.1 ShiD9_010100017565 tryptophanyl-tRNA synthetase 2386 3390 -1
CDS - ZP_05434594.1 ShiD9_010100017570 phosphoglycolate phosphatase 3383 4141 -1
CDS - ZP_05434595.1 ShiD9_010100017575 ribulose-phosphate 3-epimerase 4134 4811 -1
CDS - ZP_05434596.1 ShiD9_010100017580 DNA adenine methylase 4829 5665 -1
CDS - ZP_05434597.1 ShiD9_010100017585 hypothetical protein 5772 7058 -1
CDS aroB ZP_05434598.1 ShiD9_010100017590 3-dehydroquinate synthase 7150 8238 -1
CDS aroK ZP_05434599.1 ShiD9_010100017595 shikimate kinase I 8295 8816 -1
CDS hofQ ZP_05434600.1 ShiD9_010100017600 outer membrane porin HofQ 9217 10455 -1
CDS - ZP_05434601.1 ShiD9_010100017605 hypothetical protein 10367 10771 -1
CDS - ZP_05434602.1 ShiD9_010100017610 hypothetical protein 10761 11201 -1
CDS - ZP_05434603.1 ShiD9_010100017615 fimbrial assembly family protein 11185 11724 -1
CDS - ZP_05434604.1 ShiD9_010100017620 putative pilus assembly protein 11724 12503 -1
CDS mrcA ZP_05434605.1 ShiD9_010100017625 peptidoglycan synthetase 12623 15175 1
CDS nudE ZP_05434606.1 ShiD9_010100017630 ADP-ribose diphosphatase NudE 15340 15900 -1
CDS - ZP_05434607.1 ShiD9_010100017635 putative dehydrogenase 16220 18355 1
CDS - ZP_05434608.1 ShiD9_010100017640 putative hydrolase 18420 19088 1
CDS - ZP_05434609.1 ShiD9_010100017645 ribosome-associated heat shock protein Hsp15 19099 19500 1
CDS hslO ZP_05434610.1 ShiD9_010100017650 Hsp33-like chaperonin 19525 20403 1
CDS - ZP_05434611.1 ShiD9_010100017655 putative transport 20538 22262 -1
CDS - ZP_05434612.1 ShiD9_010100017660 phosphoenolpyruvate carboxykinase 22641 24263 1
CDS envZ ZP_05434613.1 ShiD9_010100017665 osmolarity sensor protein 24340 25692 -1
CDS ompR ZP_05434614.1 ShiD9_010100017670 osmolarity response regulator 25689 26408 -1
CDS greB ZP_05434615.1 ShiD9_010100017675 transcription elongation factor GreB 26636 27112 1
CDS - ZP_05434616.1 ShiD9_010100017680 transcriptional accessory protein 27209 29530 1
CDS feoA ZP_05434617.1 ShiD9_010100017685 ferrous iron transport protein A 29968 30195 1
CDS feoB ZP_05434618.1 ShiD9_010100017690 ferrous iron transport protein B 30212 32533 1
CDS - ZP_05434619.1 ShiD9_010100017695 predicted DNA-binding transcriptional regulator 32533 32769 1
CDS - ZP_05434620.1 ShiD9_010100017700 hypothetical protein 32972 33265 1
CDS - ZP_05434621.1 ShiD9_010100017705 hypothetical protein 33278 33850 1
CDS - ZP_05434622.1 ShiD9_010100017710 carboxylesterase BioH 33879 34649 -1
CDS - ZP_05434623.1 ShiD9_010100017715 gluconate periplasmic binding protein 34687 35370 1
CDS - ZP_05434624.1 ShiD9_010100017720 putative DNA uptake protein 35429 36004 1
CDS - ZP_05434625.1 ShiD9_010100017725 gluconate transporter, high-affinity GNT I system 36365 37681 1
CDS malQ ZP_05434626.1 ShiD9_010100017730 4-alpha-glucanotransferase 37726 39810 -1
CDS - ZP_05434627.1 ShiD9_010100017735 glycogen/starch/alpha-glucan phosphorylase 39820 42213 -1
CDS - ZP_05434628.1 ShiD9_010100017740 transcriptional regulator MalT 42825 45530 1
CDS - ZP_05434629.1 ShiD9_010100017745 RNA 3'-terminal-phosphate cyclase 45573 46589 -1
CDS - ZP_05434630.1 ShiD9_010100017750 hypothetical protein 46593 47819 -1
CDS - ZP_05434631.1 ShiD9_010100017755 transcriptional activator 48008 49606 1
CDS - ZP_05434632.1 ShiD9_010100017760 DNA-binding transcriptional repressor GlpR 49588 50346 -1
CDS - ZP_05434633.1 ShiD9_010100017765 intramembrane serine protease GlpG 50363 51193 -1
CDS glpE ZP_05434634.1 ShiD9_010100017770 thiosulfate sulfurtransferase 51238 51564 -1
CDS glpD ZP_05434635.1 ShiD9_010100017775 glycerol-3-phosphate dehydrogenase 51754 53259 1
CDS - ZP_05434636.1 ShiD9_010100017780 hypothetical protein 53313 53918 -1
CDS - ZP_05434637.1 ShiD9_010100017785 hypothetical protein 53921 54688 -1
CDS - ZP_05434638.1 ShiD9_010100017790 hypothetical protein 54691 55401 -1
CDS - ZP_05434639.1 ShiD9_010100017795 hypothetical protein 55416 56921 -1
CDS - ZP_05434640.1 ShiD9_010100017800 putative IS4 transposase; KpLE2 phage-like element 57111 57905 1
CDS - ZP_05434641.1 ShiD9_010100017805 IS4 orf 58017 58439 1
CDS - ZP_05434642.1 ShiD9_010100017810 glycogen phosphorylase 58486 60933 -1
CDS glgA ZP_05434643.1 ShiD9_010100017815 glycogen synthase 60952 62385 -1
CDS glgC ZP_05434644.1 ShiD9_010100017820 glucose-1-phosphate adenylyltransferase 62385 63680 -1
CDS - ZP_05434645.1 ShiD9_010100017825 glycogen debranching enzyme 63698 65671 -1
CDS - ZP_05434646.1 ShiD9_010100017830 glycogen branching enzyme 65668 67854 -1
CDS - ZP_05434647.1 ShiD9_010100017835 aspartate-semialdehyde dehydrogenase 68127 69230 -1
CDS - ZP_05434648.1 ShiD9_010100017840 putative dITP- and XTP- hydrolase 69422 70015 1
CDS - ZP_05434649.1 ShiD9_010100017845 low affinity gluconate transporter 70072 71412 -1
CDS gntK ZP_05434650.1 ShiD9_010100017850 gluconate kinase 1 71416 71904 -1
CDS - ZP_05434651.1 ShiD9_010100017855 DNA-binding transcriptional repressor 72082 73077 -1
CDS - ZP_05434652.1 ShiD9_010100017860 hypothetical protein 73301 73996 -1
CDS - ZP_05434653.1 ShiD9_010100017865 putative dehydrogenase 74119 75156 -1
CDS - ZP_05434654.1 ShiD9_010100017870 putative acetyltransferase YhhY 75489 75977 1
CDS - ZP_05434655.1 ShiD9_010100017875 type VI secretion system effector, Hcp1 family protein 76214 77392 1
CDS - ZP_05434656.1 ShiD9_010100017880 hypothetical protein 77389 77883 1
CDS - ZP_05434657.1 ShiD9_010100017885 hypothetical protein 78333 78617 1
CDS ggt ZP_05434658.1 ShiD9_010100017890 gamma-glutamyltranspeptidase 78655 80397 -1
CDS - ZP_05434659.1 ShiD9_010100017895 hypothetical protein 80517 80957 1
CDS ugpQ ZP_05434660.1 ShiD9_010100017900 cytoplasmic glycerophosphodiester phosphodiesterase 80944 81687 -1
CDS ugpC ZP_05434661.1 ShiD9_010100017905 glycerol-3-phosphate transporter ATP-binding subunit 81684 82754 -1
CDS - ZP_05434662.1 ShiD9_010100017910 glycerol-3-phosphate transporter membrane protein 82756 83601 -1
CDS - ZP_05434663.1 ShiD9_010100017915 glycerol-3-phosphate transporter permease 83598 84485 -1
CDS - ZP_05434664.1 ShiD9_010100017920 glycerol-3-phosphate transporter periplasmic binding protein 84583 85899 -1
CDS livF ZP_05434665.1 ShiD9_010100017925 leucine/isoleucine/valine transporter ATP-binding subunit 86295 87008 -1
CDS livG ZP_05434666.1 ShiD9_010100017930 leucine/isoleucine/valine transporter ATP-binding subunit 87010 87777 -1
CDS livM ZP_05434667.1 ShiD9_010100017935 leucine/isoleucine/valine transporter permease subunit 87774 89051 -1
CDS - ZP_05434668.1 ShiD9_010100017940 branched-chain amino acid transporter permease subunit LivH 89048 89974 -1
CDS - ZP_05434669.1 ShiD9_010100017945 Extracellular ligand-binding receptor 90022 91131 -1
CDS - ZP_05434670.1 ShiD9_010100017950 hypothetical protein 91555 91938 1
CDS - ZP_05434671.1 ShiD9_010100017955 hypothetical protein 91935 92462 -1
CDS - ZP_05434672.1 ShiD9_010100017960 hypothetical protein 92469 92735 -1
CDS - ZP_05434673.1 ShiD9_010100017965 leucine/isoleucine/valine transporter subunit ; periplasmic-binding component of ABC superfamily protein 92885 93988 -1
CDS - ZP_05434674.1 ShiD9_010100017970 RNA polymerase factor sigma-32 94260 95114 -1
CDS ftsX ZP_05434675.1 ShiD9_010100017975 cell division protein FtsX 95359 96417 -1
CDS - ZP_05434676.1 ShiD9_010100017980 cell division protein FtsE 96410 97078 -1
CDS - ZP_05434677.1 ShiD9_010100017985 cell division protein FtsY 97081 98574 -1
CDS rsmD ZP_05434678.1 ShiD9_010100017990 16S rRNA m(2)G966-methyltransferase 98724 99320 1
CDS - ZP_05434679.1 ShiD9_010100017995 hypothetical protein 99310 99579 1
CDS - ZP_05434680.1 ShiD9_010100018000 hypothetical protein 99582 99941 -1
CDS - ZP_05434681.1 ShiD9_010100018005 conserved inner membrane protein 100082 100708 1
CDS zntA ZP_05434682.1 ShiD9_010100018010 zinc/cadmium/mercury/lead-transporting ATPase 100782 102980 1
CDS - ZP_05434683.1 ShiD9_010100018015 sulfur transfer protein SirA 103082 103327 -1
CDS - ZP_05434684.1 ShiD9_010100018020 hypothetical protein 103548 104213 1
CDS - ZP_05434685.1 ShiD9_010100018025 hypothetical protein 104286 104843 1
CDS - ZP_05434686.1 ShiD9_010100018030 major facilitator superfamily transporter 104847 106064 -1
CDS - ZP_05434687.1 ShiD9_010100018035 hypothetical protein 106196 107245 1
CDS - ZP_05434688.1 ShiD9_010100018040 holo-(acyl carrier protein) synthase 2 107300 107887 1
CDS - ZP_05434689.1 ShiD9_010100018045 nickel transporter subunit ; periplasmic-binding component of ABC superfamily protein 107998 109572 1