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Shigella sp. D9, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - ShiD9_010100t18652 tRNA-Pro 259 335 -1
CDS - ZP_05434760.1 ShiD9_010100018400 phosphoethanolamine transferase 427 2118 -1
CDS - ZP_05434761.1 ShiD9_010100018405 oxalate/formate antiporter protein 2442 3650 -1
CDS - ZP_05434762.1 ShiD9_010100018410 putative lipase 3879 4577 -1
CDS - ZP_05434763.1 ShiD9_010100018415 3-methyl-adenine DNA glycosylase I 4735 5298 1
CDS - ZP_05434764.1 ShiD9_010100018420 hypothetical protein 5295 5735 1
CDS - ZP_05434765.1 ShiD9_010100018425 biotin sulfoxide reductase 5704 7983 -1
CDS - ZP_05434766.1 ShiD9_010100018430 putative outer membrane lipoprotein 8190 8849 1
CDS - ZP_05434767.1 ShiD9_010100018435 2-ketoaldonate reductase/glyoxylate reductase B 8953 9927 1
CDS - ZP_05434768.1 ShiD9_010100018440 hypothetical protein 9977 10687 -1
CDS - ZP_05434769.1 ShiD9_010100018445 putative transcriptional regulator 11121 11411 1
CDS - ZP_05434770.1 ShiD9_010100018450 major cold shock protein 11692 11904 1
CDS glyS ZP_05434771.1 ShiD9_010100018455 glycyl-tRNA synthetase subunit beta 12570 14639 -1
CDS glyQ ZP_05434772.1 ShiD9_010100018460 glycyl-tRNA synthetase subunit alpha 14649 15560 -1
CDS - ZP_05434773.1 ShiD9_010100018465 hypothetical protein 15655 15954 -1
CDS - ZP_05434774.1 ShiD9_010100018470 hypothetical protein 16129 17124 1
CDS - ZP_05434775.1 ShiD9_010100018475 hypothetical protein 17166 17603 -1
CDS - ZP_05434776.1 ShiD9_010100018480 hypothetical protein 17649 17990 -1
CDS - ZP_05434777.1 ShiD9_010100018485 xylulokinase 18159 19613 -1
CDS - ZP_05434778.1 ShiD9_010100018490 xylose isomerase 19685 21007 -1
CDS xylF ZP_05434779.1 ShiD9_010100018495 D-xylose transporter subunit XylF 21373 22365 1
CDS - ZP_05434780.1 ShiD9_010100018500 xylose transporter ATP-binding subunit 22443 23984 1
CDS - ZP_05434781.1 ShiD9_010100018505 D-xylose transporter subunit, membrane component of ABC superfamily protein 23962 25143 1
CDS - ZP_05434782.1 ShiD9_010100018510 DNA-binding transcriptional activator, xylose-binding protein 25221 26399 1
CDS - ZP_05434783.1 ShiD9_010100018515 hypothetical protein 26507 27079 -1
CDS malS ZP_05434784.1 ShiD9_010100018520 periplasmic alpha-amylase precursor 27651 29681 1
CDS avtA ZP_05434785.1 ShiD9_010100018525 valine--pyruvate transaminase 29859 31112 1
CDS - ZP_05434786.1 ShiD9_010100018530 predicted hydrogenase, 4Fe-4S ferredoxin-type component 31264 31737 -1
CDS - ZP_05434787.1 ShiD9_010100018535 DNA-binding transcriptional repressor 31839 32687 -1
CDS - ZP_05434788.1 ShiD9_010100018540 2,3-diketo-L-gulonate reductase 32888 33886 1
CDS - ZP_05434789.1 ShiD9_010100018545 hypothetical protein 33898 34365 1
CDS - ZP_05434790.1 ShiD9_010100018550 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM 34483 34956 1
CDS - ZP_05434791.1 ShiD9_010100018555 TRAP dicarboxylate transporter, DctM subunit 34959 36236 1
CDS - ZP_05434792.1 ShiD9_010100018560 transporter 36249 37235 1
CDS - ZP_05434793.1 ShiD9_010100018565 L-xylulose kinase 37239 38735 1
CDS sgbH ZP_05434794.1 ShiD9_010100018570 3-keto-L-gulonate-6-phosphate decarboxylase 38732 39394 1
CDS - ZP_05434795.1 ShiD9_010100018575 putative L-xylulose 5-phosphate 3-epimerase 39387 40247 1
CDS sgbE ZP_05434796.1 ShiD9_010100018580 L-ribulose-5-phosphate 4-epimerase 40241 40936 1
CDS - ZP_05434797.1 ShiD9_010100018585 putative regulatory protein 40968 41783 -1
CDS - ZP_05434798.1 ShiD9_010100018590 putative permease of the major facilitator superfamily protein 42009 43409 1
CDS - ZP_05434799.1 ShiD9_010100018595 hypothetical protein 43420 45399 1
CDS - ZP_05434800.1 ShiD9_010100018600 hypothetical protein 45520 46260 -1
CDS - ZP_05434801.1 ShiD9_010100018605 putative transcriptional regulator 46384 47358 1
CDS - ZP_05434802.1 ShiD9_010100018610 membrane fusion protein (MFP) component of efflux pump, signal anchor 47355 48491 -1
CDS - ZP_05434803.1 ShiD9_010100018615 hypothetical protein 48497 48820 -1
CDS - ZP_05434804.1 ShiD9_010100018620 hypothetical protein 49003 49146 1
CDS - ZP_05434805.1 ShiD9_010100018625 aldehyde dehydrogenase 49365 50903 -1
CDS - ZP_05434806.1 ShiD9_010100018630 putative alcohol dehydrogenase 51068 52219 -1
CDS - ZP_05434807.1 ShiD9_010100018635 selenocysteinyl-tRNA-specific translation factor 52409 54253 -1
CDS - ZP_05434808.1 ShiD9_010100018640 selenocysteine synthase 54250 55641 -1
CDS - ZP_05434809.1 ShiD9_010100018645 putative glutathione S-transferase 55739 56347 -1