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Sphingomonas sp. SKA58, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_01302655.1 SKA58_03165 NusB antitermination factor 46 492 1
CDS - ZP_01302656.1 SKA58_03170 hypothetical protein 997 1290 1
CDS - ZP_01302657.1 SKA58_03175 dehydrogenase 1972 2343 -1
CDS - ZP_01302658.1 SKA58_03180 hypothetical protein 2343 2537 -1
CDS - ZP_01302659.1 SKA58_03185 sodium:galactoside symporter family protein 2718 4064 -1
CDS - ZP_01302660.1 SKA58_03190 hypothetical protein 4122 5144 -1
CDS - ZP_01302661.1 SKA58_03195 TonB-dependent receptor, putative 5604 8048 1
CDS - ZP_01302662.1 SKA58_03200 protein tyrosine/serine phosphatase 8063 9127 1
CDS - ZP_01302663.1 SKA58_03205 Ferredoxin-dependent glutamate synthase 9623 11263 -1
CDS - ZP_01302664.1 SKA58_03210 pyruvate dehydrogenase (cytochrome) 11260 12972 -1
CDS - ZP_01302665.1 SKA58_03215 transposase 13699 14883 -1
CDS - ZP_01302666.1 SKA58_03220 IS3 family element, transposase orfB 15113 15499 -1
CDS - ZP_01302667.1 SKA58_03225 Helix-turn-helix, Fis-type:Transposase, IS3/IS911 family protein 15600 15890 -1
CDS - ZP_01302668.1 SKA58_03230 hypothetical protein 16019 16138 1
CDS - ZP_01302669.1 SKA58_03235 hypothetical protein 16131 16889 1
CDS - ZP_01302670.1 SKA58_03240 acylaminoacyl-peptidase 17892 20009 -1
CDS - ZP_01302671.1 SKA58_03245 TonB-dependent receptor 20006 22576 -1
CDS - ZP_01302672.1 SKA58_03250 two-component system sensor protein 22678 23667 -1
CDS - ZP_01302673.1 SKA58_03255 RNA polymerase sigma-70 factor, putative 23660 24358 -1
CDS - ZP_01302674.1 SKA58_03260 hypothetical protein 24458 24535 1
CDS - ZP_01302675.1 SKA58_03265 transposase 24819 26003 -1
CDS - ZP_01302676.1 SKA58_03270 hypothetical protein 26478 27323 1
CDS - ZP_01302677.1 SKA58_03275 symbiosis island integrase 27334 28209 -1
CDS - ZP_01302678.1 SKA58_03280 putative integrase 28134 28604 -1
tRNA - - SKA58_t04241 tRNA-Leu 28722 28805 -1
CDS - ZP_01302679.1 SKA58_03285 predicted hydrolase 28923 29690 1
CDS - ZP_01302680.1 SKA58_03290 hypothetical protein 29690 30556 1
CDS - ZP_01302681.1 SKA58_03295 hypothetical protein 30621 30863 1
CDS - ZP_01302682.1 SKA58_03300 hypothetical protein 30869 31591 -1
CDS - ZP_01302683.1 SKA58_03305 Glyoxalase/bleomycin resistance protein/dioxygenase 31693 32106 1
CDS - ZP_01302684.1 SKA58_03310 Zn-dependent hydrolase 32100 32831 1
CDS - ZP_01302685.1 SKA58_03315 hypothetical protein 32886 33290 1
CDS - ZP_01302686.1 SKA58_03320 AMP-dependent synthetase and ligase 33318 35072 -1
CDS - ZP_01302687.1 SKA58_03325 Holliday junction DNA helicase RuvB 35212 36231 -1
CDS - ZP_01302688.1 SKA58_03330 probable holliday junction DNA helicase protein 36228 36836 -1
CDS - ZP_01302689.1 SKA58_03335 hypothetical protein 36960 37529 1
CDS - ZP_01302690.1 SKA58_03340 hypothetical protein 37586 37945 1
CDS - ZP_01302691.1 SKA58_03345 Isoprenylcysteine carboxyl methyltransferase 38001 39308 1
CDS - ZP_01302692.1 SKA58_03350 glutamate-cysteine ligase precursor 39312 40685 -1
CDS - ZP_01302693.1 SKA58_03355 hypothetical protein 40784 41530 -1
CDS - ZP_01302694.1 SKA58_03360 hypothetical protein 41574 42722 -1
CDS - ZP_01302695.1 SKA58_03365 hypothetical protein 42726 44156 -1
CDS - ZP_01302696.1 SKA58_03370 4-hydroxybenzoate polyprenyl transferase 44289 45194 1
CDS - ZP_01302697.1 SKA58_03375 Phospholipase D/Transphosphatidylase 45191 46645 1
CDS - ZP_01302698.1 SKA58_03380 aminotransferase, classes I and II 46642 47760 -1
CDS - ZP_01302699.1 SKA58_03385 Chromosome segregation protein SMC 47841 51284 -1
CDS - ZP_01302700.1 SKA58_03390 protein-disulfide isomerase 51359 52090 -1
CDS - ZP_01302701.1 SKA58_03395 protein-disulfide isomerase 52134 52799 -1
CDS - ZP_01302702.1 SKA58_03400 hypothetical protein 52853 53395 -1
CDS - ZP_01302703.1 SKA58_03405 HhH-GPD 53422 54492 1
CDS - ZP_01302704.1 SKA58_03410 NUDIX hydrolase 54470 55387 1
CDS - ZP_01302705.1 SKA58_03415 peptidase U62, modulator of DNA gyrase 55431 56777 1
CDS - ZP_01302706.1 SKA58_03420 inositol monophosphatase 56764 57561 1
CDS - ZP_01302707.1 SKA58_03425 hypothetical protein 57558 58151 -1
CDS - ZP_01302708.1 SKA58_03430 phosphoribosylamine--glycine ligase 58219 59511 -1
CDS - ZP_01302709.1 SKA58_03435 exodeoxyribonuclease VII large subunit 59510 60991 1
CDS - ZP_01302710.1 SKA58_03440 hypothetical protein 61015 61227 1
CDS - ZP_01302711.1 SKA58_03445 peptidase 61224 62075 1
CDS - ZP_01302712.1 SKA58_03450 hypothetical protein 62083 62628 -1
CDS - ZP_01302713.1 SKA58_03455 hypothetical protein 63020 66031 1
CDS - ZP_01302714.1 SKA58_03460 hypothetical protein 66134 66874 -1
CDS - ZP_01302715.1 SKA58_03465 hypothetical protein 66968 67147 1
CDS - ZP_01302716.1 SKA58_03470 hypothetical protein 67274 68548 1
CDS - ZP_01302717.1 SKA58_03475 hypothetical protein 68676 68876 1
CDS - ZP_01302718.1 SKA58_03480 AAA ATPase, central region 68914 71493 -1
CDS - ZP_01302719.1 SKA58_03485 peptidase M28 71569 73248 -1
CDS - ZP_01302720.1 SKA58_03490 peptidase M16-like protein 73413 76295 1
CDS - ZP_01302721.1 SKA58_03495 hypothetical protein 76319 76618 1
CDS - ZP_01302722.1 SKA58_03500 transcriptional regulator, MarR family protein 76739 77194 1
CDS - ZP_01302723.1 SKA58_03505 hypothetical protein 77191 79257 1
CDS - ZP_01302724.1 SKA58_03510 hypothetical protein 79254 79469 1
CDS - ZP_01302725.1 SKA58_03515 putative HlyD family secretion protein 79466 80368 1
CDS - ZP_01302726.1 SKA58_03520 probable outer membrane efflux protein 80337 81800 1
CDS - ZP_01302727.1 SKA58_03525 beta-galactosidase I 81759 82700 -1
CDS - ZP_01302728.1 SKA58_03530 putative arabinogalactan endo-1,4-beta-galactosidase 82697 83905 -1
CDS - ZP_01302729.1 SKA58_03535 beta-galactosidase precursor 83902 86289 -1
CDS - ZP_01302730.1 SKA58_03540 2-deoxy-D-gluconate 3-dehydrogenase 86434 87189 -1
CDS - ZP_01302731.1 SKA58_03545 hypothetical protein 87298 87906 -1
CDS - ZP_01302732.1 SKA58_03550 putative iron-sulfur binding protein 87903 89297 -1
CDS - ZP_01302733.1 SKA58_03555 predicted Fe-S oxidoreductase 89294 90049 -1
CDS - ZP_01302734.1 SKA58_03560 hypothetical protein 90046 91038 -1
CDS - ZP_01302735.1 SKA58_03565 YesT 91029 91835 -1
CDS - ZP_01302736.1 SKA58_03570 glucose 1-dehydrogenase related protein 91862 92626 -1
CDS - ZP_01302737.1 SKA58_03575 regulatory protein, IclR 92646 93455 -1
CDS - ZP_01302738.1 SKA58_03580 putative MR-MLE-family protein 93706 94899 1
CDS - ZP_01302739.1 SKA58_03585 putative bifunctional enzyme 2-hydroxyhepta-2,4-diene-1,7-dioatesomerase 94924 95781 1
CDS - ZP_01302740.1 SKA58_03590 3-oxoacyl-(acyl carrier protein) reductase 95778 96527 1
CDS - ZP_01302741.1 SKA58_03595 hypothetical protein 96597 97499 1
CDS - ZP_01302742.1 SKA58_03600 RhaT l-rhamnose-proton symport 2 97496 98560 1
CDS - ZP_01302743.1 SKA58_03605 endo-arabinase 98560 99600 1
CDS - ZP_01302744.1 SKA58_03610 hypothetical protein 99563 100405 1
CDS - ZP_01302745.1 SKA58_03615 transcriptional regulator, LacI family protein 100413 101456 -1
CDS - ZP_01302746.1 SKA58_03620 hypothetical protein 101505 102476 -1
CDS - ZP_01302747.1 SKA58_03625 hypothetical protein 102476 103657 -1
CDS - ZP_01302748.1 SKA58_03630 oligogalacturonide transporter 103679 105187 -1
CDS - ZP_01302749.1 SKA58_03635 hypothetical protein 105312 107762 -1
CDS - ZP_01302750.1 SKA58_03640 hypothetical protein 107762 107857 -1
CDS - ZP_01302751.1 SKA58_03645 plant-inducible protein 107884 108999 -1
CDS - ZP_01302752.1 SKA58_03650 beta-galactosidase 109001 112015 -1
CDS - ZP_01302753.1 SKA58_03655 hypothetical protein 112026 112340 -1