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Sphingomonas sp. SKA58, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_01304351.1 SKA58_16993 transposase 1 844 1
CDS - ZP_01304352.1 SKA58_16998 putative transposase 940 1704 -1
CDS - ZP_01304353.1 SKA58_17003 putative transposase 1736 2092 -1
CDS - ZP_01304354.1 SKA58_17008 hypothetical protein 2089 2514 -1
CDS - ZP_01304355.1 SKA58_17013 putative transposase 2668 2979 1
CDS - ZP_01304356.1 SKA58_17018 Transposase and inactivated derivative 2976 3323 1
CDS - ZP_01304357.1 SKA58_17023 TnpC protein 3363 4184 1
CDS - ZP_01304358.1 SKA58_17028 IS3 family element, transposase orfB 4211 5005 -1
CDS - ZP_01304359.1 SKA58_17033 Helix-turn-helix, Fis-type:Transposase, IS3/IS911family protein 5065 5337 -1
CDS - ZP_01304360.1 SKA58_17038 Transposase and inactivated derivative 5765 6169 1
CDS - ZP_01304361.1 SKA58_17043 transcriptional regulator, XRE family protein 6706 7119 -1
CDS - ZP_01304362.1 SKA58_17048 hypothetical protein 7324 7431 -1
CDS - ZP_01304363.1 SKA58_17053 symbiosis island integrase 7505 8608 -1
tRNA - - SKA58_t17437 tRNA-Phe 8902 8974 -1
CDS - ZP_01304364.1 SKA58_17058 hypothetical protein 9023 9121 -1
CDS - ZP_01304365.1 SKA58_17063 ribonuclease 9207 10196 -1
CDS - ZP_01304366.1 SKA58_17068 nucleotide-binding protein 10205 10702 -1
CDS - ZP_01304367.1 SKA58_17073 translation initiation factor IF-1 10790 11008 -1
CDS - ZP_01304368.1 SKA58_17078 adenosylmethionine--8-amino-7-oxononanoate transaminase 11068 12357 -1
CDS - ZP_01304369.1 SKA58_17083 probable outer membrane protein 12390 13037 -1
CDS - ZP_01304370.1 SKA58_17088 Na(+):H(+) antiporter 13034 14857 -1
CDS - ZP_01304371.1 SKA58_17093 hypothetical protein 14988 15428 -1
CDS - ZP_01304372.1 SKA58_17098 metallopeptidase 15622 17694 -1
CDS - ZP_01304373.1 SKA58_17103 dethiobiotin synthase 17801 18415 -1
CDS - ZP_01304374.1 SKA58_17108 8-amino-7-oxononanoate synthase 18412 19536 -1
CDS - ZP_01304375.1 SKA58_17113 H+ translocating pyrophosphate synthase 19693 21816 -1
CDS - ZP_01304376.1 SKA58_17118 hypothetical protein 22063 22170 -1
CDS - ZP_01304377.1 SKA58_17123 thiamine-monophosphate kinase 22258 23169 -1
CDS - ZP_01304378.1 SKA58_17128 hypothetical protein 23499 24395 1
CDS - ZP_01304379.1 SKA58_17133 glutamyl-tRNA synthetase 24434 25762 -1
CDS - ZP_01304380.1 SKA58_17138 NAD+ synthetase 25778 27439 -1
CDS - ZP_01304381.1 SKA58_17143 phosphoribosylpyrophosphate synthetase 27573 28508 1
CDS - ZP_01304382.1 SKA58_17148 hypothetical protein 28601 28837 -1
CDS - ZP_01304383.1 SKA58_17153 glyoxalase/bleomycin resistance protein/dioxygenase 28904 29344 -1
CDS - ZP_01304384.1 SKA58_17158 fructose-1,6-bisphosphatase 29411 30229 1
CDS - ZP_01304385.1 SKA58_17163 Nicotinate-nucleotide adenylyltransferase 30272 30901 1
CDS - ZP_01304386.1 SKA58_17168 Iojap-related protein 30914 31303 1
CDS - ZP_01304387.1 SKA58_17173 hypothetical protein 31351 31773 1
CDS - ZP_01304388.1 SKA58_17178 hypothetical protein 31832 33067 1
CDS - ZP_01304389.1 SKA58_17183 hypothetical protein 33191 34483 1
CDS - ZP_01304390.1 SKA58_17188 periplasmic protease 34617 35963 1
CDS - ZP_01304391.1 SKA58_17193 Disulphide bond formation protein DsbB 36025 36507 1
CDS - ZP_01304392.1 SKA58_17198 Ubiquinone biosynthesis protein COQ7 36504 37058 1
CDS - ZP_01304393.1 SKA58_17203 hypothetical protein 37090 37647 1
CDS - ZP_01304394.1 SKA58_17208 hypothetical protein 37759 38157 1
CDS - ZP_01304395.1 SKA58_17213 ABC transporter related protein 38154 40004 -1
CDS - ZP_01304396.1 SKA58_17218 hypothetical protein 40113 40835 1
CDS - ZP_01304397.1 SKA58_17223 hypothetical protein 40998 41288 -1
CDS - ZP_01304398.1 SKA58_17228 hypothetical protein 41378 42334 -1
CDS - ZP_01304399.1 SKA58_17233 homoserine O-acetyltransferase 42405 43541 1
CDS - ZP_01304400.1 SKA58_17238 hypothetical protein 43538 44128 1
CDS - ZP_01304401.1 SKA58_17243 tmRNA-binding small protein A 44181 44717 -1
CDS - ZP_01304402.1 SKA58_17248 hypothetical protein 44716 45387 1
CDS - ZP_01304403.1 SKA58_17253 hypothetical protein 45384 45905 1
CDS - ZP_01304404.1 SKA58_17258 hypothetical protein 45940 46584 1
CDS - ZP_01304405.1 SKA58_17263 DNA-directed DNA polymerase 46624 47706 1
CDS - ZP_01304406.1 SKA58_17268 hypothetical protein 47715 48536 -1
tRNA - - SKA58_t17435 tRNA-Ser 48765 48853 1
CDS - ZP_01304407.1 SKA58_17273 histidinol-phosphate aminotransferase 49003 50112 1
CDS - ZP_01304408.1 SKA58_17278 Prephenate dehydrogenase 50117 51022 1
CDS - ZP_01304409.1 SKA58_17283 phospholipid/glycerol acyltransferase 51044 51751 -1
CDS - ZP_01304410.1 SKA58_17288 hypothetical protein 51757 52287 -1
CDS - ZP_01304411.1 SKA58_17293 hypothetical protein 52284 53189 -1
CDS - ZP_01304412.1 SKA58_17298 ABC transporter related protein 53186 53914 -1
CDS - ZP_01304413.1 SKA58_17303 Zinc finger/thioredoxin putative 54082 54936 1
CDS - ZP_01304414.1 SKA58_17308 pirin-related protein 54970 55875 -1
CDS - ZP_01304415.1 SKA58_17313 probable glutathione S-transferase 55872 56579 -1
CDS - ZP_01304416.1 SKA58_17318 thiamine biosynthesis protein ThiC 56752 58647 -1
CDS - ZP_01304417.1 SKA58_17323 hypothetical protein 56758 58692 1
CDS - ZP_01304418.1 SKA58_17328 hypothetical protein 58793 59137 1
CDS - ZP_01304419.1 SKA58_17333 prolyl oligopeptidase family protein 59134 61254 1
CDS - ZP_01304420.1 SKA58_17338 transcriptional regulator, TetR family protein 61261 61875 -1
CDS - ZP_01304421.1 SKA58_17343 TonB-dependent receptor 62035 64386 1
CDS - ZP_01304422.1 SKA58_17348 major facilitator family transporter 64468 65727 1
CDS - ZP_01304423.1 SKA58_17353 peptide chain release factor 3 65734 67311 -1
CDS - ZP_01304424.1 SKA58_17358 hypothetical protein 67435 68319 -1
CDS - ZP_01304425.1 SKA58_17363 hypothetical protein 68443 68967 1
CDS - ZP_01304426.1 SKA58_17368 phenylalanyl-tRNA synthetase, beta subunit 69056 71485 -1
CDS - ZP_01304427.1 SKA58_17373 phenylalanyl-tRNA synthetase, alpha subunit 71482 72573 -1
CDS - ZP_01304428.1 SKA58_17378 Lysine exporter protein (LYSE/YGGA) 72645 73259 -1
CDS - ZP_01304429.1 SKA58_17383 ribosomal protein L20 73430 73792 -1
CDS - ZP_01304430.1 SKA58_17388 ribosomal protein L35 73806 74009 -1
CDS - ZP_01304431.1 SKA58_17393 hypothetical protein 74167 76329 1
CDS - ZP_01304432.1 SKA58_17398 DNA recombination protein 76376 77857 -1
CDS - ZP_01304433.1 SKA58_17403 DNA polymerase III, alpha subunit 78011 81667 -1
CDS - ZP_01304434.1 SKA58_17408 hypothetical protein 81664 83280 -1
CDS - ZP_01304435.1 SKA58_17413 hypothetical protein 83183 83998 -1
CDS - ZP_01304436.1 SKA58_17418 transcription elongation factor 84095 84580 -1
CDS - ZP_01304437.1 SKA58_17423 Lytic transglycosylase, catalytic 84649 86724 -1
CDS - ZP_01304438.1 SKA58_17428 dihydrodipicolinate synthase 86824 87368 1