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Sphingomonas sp. SKA58, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - SKA58_r00370 23S ribosomal RNA 1 618 -1
tRNA - - SKA58_t00364 tRNA-Ala 905 977 -1
tRNA - - SKA58_t00362 tRNA-Ile 993 1066 -1
rRNA - - SKA58_r00366 16S ribosomal RNA 1319 2815 -1
CDS - ZP_01304439.1 SKA58_00005 hypothetical protein 3269 5755 -1
CDS - ZP_01304440.1 SKA58_00010 transcriptional regulator, AraC family protein 6350 7342 1
CDS - ZP_01304441.1 SKA58_00015 enoyl-CoA hydratase 7393 8151 -1
CDS - ZP_01304442.1 SKA58_00020 Bile acid:sodium symporter 8166 9245 1
CDS - ZP_01304443.1 SKA58_00025 putative purine phosphoribosyltransferase 9242 9763 1
CDS - ZP_01304444.1 SKA58_00030 FAD dependent oxidoreductase 9855 11459 1
CDS - ZP_01304445.1 SKA58_00035 multidrug resistance transmembrane protein (MFS superfamily) 11475 13004 -1
CDS - ZP_01304446.1 SKA58_00040 putative aromatic efflux pump membrane protein 13019 14185 -1
CDS - ZP_01304447.1 SKA58_00045 probable outer membrane multidrug resistance lipoprotein 14178 15692 -1
CDS - ZP_01304448.1 SKA58_00050 TetR family transcriptional regulator 15782 16438 1
CDS - ZP_01304449.1 SKA58_00055 two component transcriptional regulator, winged helix family protein 16408 16911 -1
CDS - ZP_01304450.1 SKA58_00060 putative ISXo8 transposase 17053 17955 -1
CDS - ZP_01304451.1 SKA58_00065 hypothetical protein 17943 18755 -1
CDS - ZP_01304452.1 SKA58_00070 hypothetical protein 18752 18892 -1
CDS - ZP_01304453.1 SKA58_00075 two component transcriptional regulator, LuxR family protein 19041 19652 1
CDS - ZP_01304454.1 SKA58_00080 siroheme synthase 19655 20416 -1
CDS - ZP_01304455.1 SKA58_00085 diaminopimelate decarboxylase 20416 21681 -1
CDS - ZP_01304456.1 SKA58_00090 hypothetical protein 21698 21958 -1
CDS - ZP_01304457.1 SKA58_00095 argininosuccinate lyase 21955 23322 -1
CDS - ZP_01304458.1 SKA58_00100 thioredoxin family protein 23321 23959 1
CDS - ZP_01304459.1 SKA58_00105 TonB-dependent receptor 24215 26782 1
CDS - ZP_01304460.1 SKA58_00110 putative aminotransferase 26872 27975 1
CDS - ZP_01304461.1 SKA58_00115 aminotransferase, class V superfamily protein 27972 29222 1
CDS - ZP_01304462.1 SKA58_00120 translational inhibitor protein 29243 29674 1
CDS - ZP_01304463.1 SKA58_00125 hypothetical protein 29687 30076 -1
CDS - ZP_01304464.1 SKA58_00130 hypothetical protein 30146 30337 -1
CDS - ZP_01304465.1 SKA58_00135 peptidase S16, lon-like protein 30334 30948 -1
CDS - ZP_01304466.1 SKA58_00140 thioredoxin 30954 31865 -1
CDS - ZP_01304467.1 SKA58_00145 MltA-interacting MipA 31958 32749 -1
CDS - ZP_01304468.1 SKA58_00150 hypothetical protein 32879 33232 -1
CDS - ZP_01304469.1 SKA58_00155 sterol desaturase family protein 33307 34035 -1
CDS - ZP_01304470.1 SKA58_00160 Prephenate dehydratase 34113 35003 -1
CDS - ZP_01304471.1 SKA58_00165 cytochrome c, class I 35164 35832 1
CDS - ZP_01304472.1 SKA58_00170 exopolyphosphatase 35874 37391 -1
CDS - ZP_01304473.1 SKA58_00175 polyphosphate kinase 37400 39538 -1
CDS - ZP_01304474.1 SKA58_00180 ATPase 39542 40192 -1
CDS - ZP_01304475.1 SKA58_00185 hypothetical protein 40189 41427 -1
CDS - ZP_01304476.1 SKA58_00190 phosphoribosylformylglycinamidine cyclo-ligase 41545 42639 1
CDS - ZP_01304477.1 SKA58_00195 Phosphoribosylglycinamide formyltransferase protein 42725 43627 1
CDS - ZP_01304478.1 SKA58_00200 hypothetical protein 43670 44332 -1
CDS - ZP_01304479.1 SKA58_00205 hypothetical protein 44420 44575 -1
CDS - ZP_01304480.1 SKA58_00210 ABC transporter related protein 44585 45517 1
CDS - ZP_01304481.1 SKA58_00215 aspartate oxidase 45583 47199 1
CDS - ZP_01304482.1 SKA58_00220 two-component response regulator 47196 49085 -1
CDS - ZP_01304483.1 SKA58_00225 chemotaxis protein 49069 49956 -1
CDS - ZP_01304484.1 SKA58_00230 two-component system sensor protein 49941 53045 -1
CDS - ZP_01304485.1 SKA58_00235 Replication protein B 53198 54217 -1
CDS - ZP_01304486.1 SKA58_00240 plasmid partitioning protein RepAa1 54288 55241 -1
CDS - ZP_01304487.1 SKA58_00245 replication initiator protein 56259 57470 -1
CDS - ZP_01304488.1 SKA58_00250 hypothetical protein 57931 58941 -1
CDS - ZP_01304489.1 SKA58_00255 lipolytic enzyme, G-D-S-L 59122 59715 -1
CDS - ZP_01304490.1 SKA58_00260 probable ABC transporter ATP-binding protein 59842 60543 1
CDS - ZP_01304491.1 SKA58_00265 hypothetical protein 60540 63062 1
CDS - ZP_01304492.1 SKA58_00270 Azu1 pseudoazurin (blue copper protein) 63152 63607 -1
CDS - ZP_01304493.1 SKA58_00275 hypothetical protein 63719 64258 -1
CDS - ZP_01304494.1 SKA58_00280 hypothetical protein 64324 65112 1
CDS - ZP_01304495.1 SKA58_00285 hydrolase, putative 65112 66053 1
CDS - ZP_01304496.1 SKA58_00290 TonB-dependent receptor 66057 68378 -1
CDS - ZP_01304497.1 SKA58_00295 TonB-dependent receptor 68449 70452 -1
CDS - ZP_01304498.1 SKA58_00300 hypothetical protein 70564 71967 -1
CDS - ZP_01304499.1 SKA58_00305 YVTN beta-propeller repeat family protein 72089 73048 -1
CDS - ZP_01304500.1 SKA58_00310 cytochrome c550 73185 73622 1
CDS - ZP_01304501.1 SKA58_00315 extracellular solute-binding protein, family 3 73627 74484 1
CDS - ZP_01304502.1 SKA58_00320 Pyrrolo-quinoline quinone 74791 76545 1
CDS - ZP_01304503.1 SKA58_00325 probable two-component response regulator 76570 77352 1
CDS - ZP_01304504.1 SKA58_00330 signal transduction histidine kinase 77367 79592 -1
CDS - ZP_01304505.1 SKA58_00335 hypothetical protein 79589 80668 -1
CDS - ZP_01304506.1 SKA58_00340 hypothetical protein 80807 81193 -1
CDS - ZP_01304507.1 SKA58_00345 chloroacetaldehyde dehydrogenase 81309 82829 -1
CDS - ZP_01304508.1 SKA58_00350 transcriptional regulator, TetR family protein 82992 83588 1
CDS - ZP_01304509.1 SKA58_00355 Acyl-CoA dehydrogenase 83639 85357 1
rRNA - - SKA58_r00368 16S ribosomal RNA 85801 86049 1