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Sphingomonas sp. SKA58, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - SKA58_r03165 23S ribosomal RNA 1 816 1
rRNA - - SKA58_r03163 5S ribosomal RNA 965 1080 1
tRNA - - SKA58_t03161 tRNA-Met 1286 1359 1
CDS - ZP_01304582.1 SKA58_02789 BolA-like protein 1596 1913 -1
CDS - ZP_01304583.1 SKA58_02794 DnaJ-class molecular chaperone 1980 2546 1
CDS - ZP_01304584.1 SKA58_02799 hypothetical protein 2611 3903 1
CDS - ZP_01304585.1 SKA58_02804 cobalt chelatase, pCobS small subunit 3991 4998 1
CDS - ZP_01304586.1 SKA58_02809 hypothetical protein 5038 5460 1
CDS - ZP_01304587.1 SKA58_02814 hypothetical protein 5457 6233 1
CDS - ZP_01304588.1 SKA58_02819 cobT protein 6230 8056 1
CDS - ZP_01304589.1 SKA58_02824 nucleoside diphosphate kinase regulator 8110 8580 1
CDS - ZP_01304590.1 SKA58_02829 hypothetical low temperature-induced protein 8651 9142 -1
CDS - ZP_01304591.1 SKA58_02834 hypothetical protein 9245 9811 -1
CDS - ZP_01304592.1 SKA58_02839 hypothetical protein 9822 10136 -1
CDS - ZP_01304593.1 SKA58_02844 ribosomal protein L33 10325 10492 1
CDS - ZP_01304594.1 SKA58_02849 hypothetical protein 10673 12538 -1
CDS - ZP_01304595.1 SKA58_02854 two-component response regulator 12683 13045 -1
CDS - ZP_01304596.1 SKA58_02859 hypothetical protein 13108 13407 1
CDS - ZP_01304597.1 SKA58_02864 hypothetical protein 13404 14057 1
CDS - ZP_01304598.1 SKA58_02869 Endoribonuclease L-PSP 14054 14515 1
CDS - ZP_01304599.1 SKA58_02874 glycerophosphoryl diester phosphodiesterase 14586 15221 1
CDS - ZP_01304600.1 SKA58_02879 hypothetical protein 15202 16347 1
CDS - ZP_01304601.1 SKA58_02884 Sel1-like repeat protein 16352 16648 -1
CDS - ZP_01304602.1 SKA58_02889 bicyclomycin resistance protein 16915 18105 1
CDS - ZP_01304603.1 SKA58_02894 amino acid transporter 18146 19726 -1
CDS - ZP_01304604.1 SKA58_02899 hypothetical protein 19858 20619 1
CDS - ZP_01304605.1 SKA58_02904 hypothetical protein 20627 21514 -1
CDS - ZP_01304606.1 SKA58_02909 uroporphyrinogen-III synthase 21511 22194 -1
CDS - ZP_01304607.1 SKA58_02914 porphobilinogen deaminase 22191 23132 -1
CDS - ZP_01304608.1 SKA58_02919 metal-dependent protease 23165 24211 1
CDS - ZP_01304609.1 SKA58_02924 glycerol-3-phosphate dehydrogenase (NAD+) 24225 25196 1
CDS - ZP_01304610.1 SKA58_02929 membrane protein 25228 26748 1
CDS - ZP_01304611.1 SKA58_02934 sugar kinase 26783 27784 -1
CDS - ZP_01304612.1 SKA58_02939 hypothetical protein 27796 28548 1
CDS - ZP_01304613.1 SKA58_02944 hypothetical protein 28545 28916 1
CDS - ZP_01304614.1 SKA58_02949 hypothetical protein 29358 30152 -1
CDS - ZP_01304615.1 SKA58_02954 4Fe-4S ferredoxin, iron-sulfur binding protein 30267 31307 -1
CDS - ZP_01304616.1 SKA58_02959 ABC transporter related protein 31351 32340 1
CDS - ZP_01304617.1 SKA58_02964 hypothetical protein 32337 33527 1
CDS - ZP_01304618.1 SKA58_02969 putative methionine sulfoxide reductase, SelR 33535 34023 1
CDS - ZP_01304619.1 SKA58_02974 hypothetical protein 34004 35770 -1
CDS - ZP_01304620.1 SKA58_02979 hypothetical protein 35748 36155 -1
CDS - ZP_01304621.1 SKA58_02984 hypothetical protein 36160 37683 -1
CDS - ZP_01304622.1 SKA58_02989 hypothetical protein 37900 38232 -1
CDS - ZP_01304623.1 SKA58_02994 bifunctional purine biosynthesis protein 38408 39997 -1
CDS - ZP_01304624.1 SKA58_02999 hypothetical protein 40084 40650 -1
CDS - ZP_01304625.1 SKA58_03004 hypothetical protein 40702 42468 -1
CDS - ZP_01304626.1 SKA58_03009 Ribulose-phosphate 3-epimerase 42465 43127 -1
CDS - ZP_01304627.1 SKA58_03014 hypothetical protein 43218 43709 -1
CDS - ZP_01304628.1 SKA58_03019 Fmu (Sun) 43771 45015 -1
CDS - ZP_01304629.1 SKA58_03024 heat shock protein HtpX 45220 46173 -1
CDS - ZP_01304630.1 SKA58_03029 hypothetical protein 46275 46448 1
CDS - ZP_01304631.1 SKA58_03034 hypothetical protein 46619 47080 1
CDS - ZP_01304632.1 SKA58_03039 Phosphomannomutase 47170 48048 1
CDS - ZP_01304633.1 SKA58_03044 hypothetical protein 48062 48193 -1
CDS - ZP_01304634.1 SKA58_03049 Short-chain dehydrogenase/reductase SDR 48265 49017 -1
CDS - ZP_01304635.1 SKA58_03054 single-strand binding protein 49036 49632 -1
CDS - ZP_01304636.1 SKA58_03059 Fe2+ transport system protein B 49689 51554 -1
CDS - ZP_01304637.1 SKA58_03064 FeoA 51551 51820 -1
CDS - ZP_01304638.1 SKA58_03069 RpsU-divergently transcribed 51903 52565 -1
CDS - ZP_01304639.1 SKA58_03074 NAD(P)H-dependent 2-cyclohexen-1-one reductase 52743 53825 1
CDS - ZP_01304640.1 SKA58_03079 riboflavin synthase beta-chain 53867 54289 -1
CDS - ZP_01304641.1 SKA58_03084 GTP cyclohydrolase II 54301 55590 -1
CDS - ZP_01304642.1 SKA58_03089 riboflavin synthase alpha chain 55660 56274 -1
CDS - ZP_01304643.1 SKA58_03094 riboflavin biosynthesis protein RibD 56310 57263 -1
CDS - ZP_01304644.1 SKA58_03099 hypothetical protein 57296 57769 -1
CDS - ZP_01304645.1 SKA58_03104 hypothetical protein 57980 59185 -1
CDS - ZP_01304646.1 SKA58_03109 acriflavin resistance protein 59328 62453 -1
CDS - ZP_01304647.1 SKA58_03114 secretion protein HlyD 62574 63746 -1
CDS - ZP_01304648.1 SKA58_03119 putative transglycosylase associated gene 64008 64256 1
CDS - ZP_01304649.1 SKA58_03124 hypothetical protein 64319 64573 -1
CDS - ZP_01304650.1 SKA58_03129 hypothetical protein 64798 65097 -1
CDS - ZP_01304651.1 SKA58_03134 hypothetical protein 65202 65450 -1
CDS - ZP_01304652.1 SKA58_03139 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 65653 66759 1
CDS - ZP_01304653.1 SKA58_03144 hypothetical protein 66870 67025 -1
CDS - ZP_01304654.1 SKA58_03149 ATP phosphoribosyltransferase 67246 67908 1
CDS - ZP_01304655.1 SKA58_03154 histidinol dehydrogenase 67952 69187 1