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Thiobacillus denitrificans ATCC 25259, complete genome. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - YP_313759.1 Tbd_0001 chromosomal replication initiator protein DnaA 137 1510 1
CDS - YP_313760.1 Tbd_0002 DNA polymerase III, beta subunit 1689 2792 1
CDS gyrB YP_313761.1 Tbd_0003 DNA gyrase subunit B 2860 5331 1
CDS - YP_313762.1 Tbd_0004 hypothetical protein 5337 5705 1
CDS - YP_313763.1 Tbd_0005 hypothetical protein 5684 5941 1
CDS - YP_313764.1 Tbd_0006 hypothetical protein 6165 6620 -1
CDS - YP_313765.1 Tbd_0007 histone-like DNA-binding protein 6865 7161 -1
CDS - YP_313766.1 Tbd_0008 rhodanese-like protein 7358 8500 -1
CDS - YP_313767.1 Tbd_0009 hypothetical protein 8567 8959 -1
CDS - YP_313768.1 Tbd_0010 DNA topoisomerase I 8962 11535 -1
CDS - YP_313769.1 Tbd_0011 Smg protein 11542 11988 -1
CDS - YP_313770.1 Tbd_0012 SMF protein 11993 12955 -1
CDS - YP_313771.1 Tbd_0013 peptidoglycan-binding LysM-like protein 13054 14265 -1
CDS - YP_313772.1 Tbd_0014 peptide deformylase 14400 14933 1
CDS - YP_313773.1 Tbd_0015 methionyl-tRNA formyltransferase 14943 15872 1
CDS - YP_313774.1 Tbd_0016 Fmu, rRNA SAM-dependent methyltransferase 15974 17230 1
CDS - YP_313775.1 Tbd_0017 proline rich signal peptide protein 17235 17837 1
CDS - YP_313776.1 Tbd_0018 multi-sensor Signal transduction histidine kinase 17837 19969 1
CDS - YP_313777.1 Tbd_0019 two component Fis family transcriptional regulator 19966 21240 1
CDS trkA YP_313778.1 Tbd_0020 potassium transporter peripheral membrane component 21257 22630 1
CDS - YP_313779.1 Tbd_0021 trk system potassium uptake membrane protein TrkH 22630 24096 1
CDS - YP_313780.1 Tbd_0022 trk system potassium uptake membrane protein 24148 25605 1
CDS - YP_313781.1 Tbd_0023 TPR repeat-containing protein 25606 25941 1
CDS - YP_313782.1 Tbd_0024 hypothetical protein 25961 26236 1
CDS - YP_313783.1 Tbd_0025 phosphate uptake regulator, PhoU 26294 26995 -1
CDS - YP_313784.1 Tbd_0026 hypothetical protein 27068 27481 -1
CDS - YP_313785.1 Tbd_0027 hypothetical protein 27478 28416 -1
CDS - YP_313786.1 Tbd_0028 ATPase 28413 29255 -1
CDS argJ YP_313787.1 Tbd_0029 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 29347 30570 -1
CDS - YP_313788.1 Tbd_0030 hypothetical protein 30626 30946 -1
CDS - YP_313789.1 Tbd_0031 hypothetical protein 31004 31342 -1
CDS - YP_313790.1 Tbd_0032 hypothetical protein 31407 32003 -1
CDS - YP_313791.1 Tbd_0033 DNA helicase/exodeoxyribonuclease V, subunit A 32000 35269 -1
CDS - YP_313792.1 Tbd_0034 DNA helicase/exodeoxyribonuclease V, subunit B 35262 37772 -1
CDS - YP_313793.1 Tbd_0035 7Fe ferredoxin 37874 38197 -1
CDS - YP_313794.1 Tbd_0036 thioredoxin 38365 38691 1
CDS rho YP_313795.1 Tbd_0037 transcription termination factor Rho 38806 40065 1
CDS - YP_313796.1 Tbd_0038 hypothetical protein 40112 40225 1
CDS rpmE YP_313797.1 Tbd_0039 50S ribosomal protein L31 40346 40552 1
CDS - YP_313798.1 Tbd_0040 hypothetical protein 40581 42122 1
CDS - YP_313799.1 Tbd_0041 hypothetical protein 42112 43671 1
CDS - YP_313800.1 Tbd_0042 molybdenum cofactor guanylyltransferase 43678 44238 1
CDS - YP_313801.1 Tbd_0043 hypothetical protein 44243 44992 -1
CDS glcF YP_313802.1 Tbd_0044 glycolate oxidase iron-sulfur subunit 45016 46248 -1
CDS - YP_313803.1 Tbd_0045 ring-cleaving dioxygenase 46250 46630 -1
CDS glcE YP_313804.1 Tbd_0046 glycolate oxidase FAD binding subunit 46631 47677 -1
CDS - YP_313805.1 Tbd_0047 glycolate oxidase, subunit GlcD 47677 49128 -1
CDS - YP_313806.1 Tbd_0048 hypothetical protein 49133 50467 -1
CDS - YP_313807.1 Tbd_0049 hypothetical protein 50491 52728 -1
CDS - YP_313808.1 Tbd_0050 IclR family transcriptional regulator 52821 53594 1
CDS - YP_313809.1 Tbd_0051 hypothetical protein 53780 54847 1
CDS - YP_313810.1 Tbd_0052 glycine cleavage system transcriptional repressor 55109 55648 1
CDS - YP_313811.1 Tbd_0053 hypothetical protein 55791 56756 -1
CDS - YP_313812.1 Tbd_0054 hypothetical protein 56780 57442 -1
CDS - YP_313813.1 Tbd_0055 cytochrome c family protein 57493 58074 1
CDS - YP_313814.1 Tbd_0056 signal transduction protein 58176 59510 1
CDS - YP_313815.1 Tbd_0057 hypothetical protein 59951 60883 -1
CDS - YP_313816.1 Tbd_0058 ribonucleoside-diphosphate reductase alpha chain 60870 62672 -1
CDS - YP_313817.1 Tbd_0059 serine/threonine protein kinase 62766 63749 1
CDS - YP_313818.1 Tbd_0060 asparagine synthase, glutamine-hydrolyzing 63763 65529 1
CDS - YP_313819.1 Tbd_0061 lytic murein transglycosylase 65522 66826 1
CDS - YP_313820.1 Tbd_0062 hypothetical protein 66883 67284 1
CDS - YP_313821.1 Tbd_0063 hypothetical protein 67281 67598 1
CDS - YP_313822.1 Tbd_0064 putative cytochrome C precursor 67635 68303 -1
CDS - YP_313823.1 Tbd_0065 hypothetical protein 68396 69286 -1
CDS - YP_313824.1 Tbd_0066 GreA/GreB family elongation factor 69293 69709 -1
CDS - YP_313825.1 Tbd_0067 hypothetical protein 69883 70539 -1
CDS - YP_313826.1 Tbd_0068 metallo-beta-lactamase superfamily protein 70570 71208 1
CDS - YP_313827.1 Tbd_0069 arginase 71231 72136 -1
CDS - YP_313828.1 Tbd_0070 nitrite reductase (NO-forming) 72194 73747 -1
CDS - YP_313829.1 Tbd_0071 Elongator protein 3/MiaB/NifB 73747 74946 -1
CDS - YP_313830.1 Tbd_0072 AsnC family transcriptional regulator 74957 75457 -1
CDS - YP_313831.1 Tbd_0073 AsnC family transcriptional regulator 75454 75897 -1
CDS - YP_313832.1 Tbd_0074 AsnC family transcriptional regulator 75897 76901 -1
CDS - YP_313833.1 Tbd_0075 heme d1 biosynthesis protein NirF 76898 78073 -1
CDS - YP_313834.1 Tbd_0076 hypothetical protein 78063 78359 -1
CDS - YP_313835.1 Tbd_0077 nitrite reductase (NO-forming) 78456 80183 -1
CDS - YP_313836.1 Tbd_0078 regulator of nitric oxide reductase transcription 80265 82142 -1
CDS - YP_313837.1 Tbd_0079 Crp/FNR family transcriptional regulator 82263 82940 1
CDS - YP_313838.1 Tbd_0080 hypothetical protein 83013 83366 -1
CDS - YP_313839.1 Tbd_0081 2-hydroxy-3-oxopropionate reductase 83363 84241 -1
CDS - YP_313840.1 Tbd_0082 hypothetical protein 84238 85194 -1
CDS - YP_313841.1 Tbd_0083 D-alanyl-D-alanine carboxypeptidase-like protein 85295 86260 -1
CDS - YP_313842.1 Tbd_0084 histidine kinase 86420 88381 1
CDS - YP_313843.1 Tbd_0085 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 88385 90601 1
tRNA - - Tbd_R0001 tRNA-Phe 90806 90881 -1
CDS - YP_313844.1 Tbd_0086 hypothetical protein 91054 91395 1
CDS - YP_313845.1 Tbd_0087 hypothetical protein 91560 91826 1
CDS - YP_313846.1 Tbd_0088 sodium:solute symporter family protein 91851 93665 1
CDS - YP_313847.1 Tbd_0089 exonuclease 93724 94425 -1
CDS - YP_313848.1 Tbd_0090 CBS signal-transduction protein 94422 96311 -1
CDS - YP_313849.1 Tbd_0091 chaperonin GroEL (Hsp60, Cpn10) 96510 98153 -1
CDS - YP_313850.1 Tbd_0092 chaperonin GroES (Hsp10, Cpn10)) 98205 98495 -1
CDS - YP_313851.1 Tbd_0093 aminotransferase 98567 99961 1
CDS - YP_313852.1 Tbd_0094 hypothetical protein 100137 100613 1
CDS - YP_313853.1 Tbd_0095 metallo-beta-lactamase superfamily protein 100853 102277 1
CDS - YP_313854.1 Tbd_0096 phospholipase 102280 103338 1
CDS - YP_313855.1 Tbd_0097 serine protease 103358 104245 -1
CDS - YP_313856.1 Tbd_0098 UDP-glucose/GDP-mannose dehydrogenase 104260 105540 1
CDS - YP_313857.1 Tbd_0099 NAD-dependent epimerase/dehydratase 105540 106568 1