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Veillonella atypica ACS-134-V-Col7a contig00060, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07315965.1 HMPREF9684_1395 hypothetical protein 410 1102 1
CDS trmB ZP_07315996.1 HMPREF9684_1396 tRNA (guanine-N(7)-)-methyltransferase 1249 1908 1
CDS - ZP_07315959.1 HMPREF9684_1397 Rod shape-determining protein RodA family protein 1910 3238 1
CDS - ZP_07315945.1 HMPREF9684_1398 putative uracil permease 3266 4549 1
CDS nfeD ZP_07315924.1 HMPREF9684_1399 nodulation efficiency protein D 4721 5185 1
CDS - ZP_07315979.1 HMPREF9684_1400 hypothetical protein 5222 6178 1
CDS - ZP_07315914.1 HMPREF9684_1401 hypothetical protein 6187 6735 1
CDS - ZP_07315929.1 HMPREF9684_1402 hypothetical protein 6893 7615 1
CDS - ZP_07315936.1 HMPREF9684_1403 hypothetical protein 7736 8674 1
CDS - ZP_07315930.1 HMPREF9684_1404 hypothetical protein 8761 9384 1
CDS - ZP_07315917.1 HMPREF9684_1405 transporter, major facilitator family protein 9648 10898 1
CDS pepT ZP_07315998.1 HMPREF9684_1406 peptidase T 10993 12216 -1
CDS - ZP_07315937.1 HMPREF9684_1407 oligopeptide transporter, OPT family 12445 14385 1
CDS - ZP_07316006.1 HMPREF9684_1408 hypothetical protein 14628 14759 1
CDS - ZP_07315991.1 HMPREF9684_1409 putative Homocysteine S-methyltransferase 14768 15787 1
tRNA - - HMPREF9684_1410 tRNA-Ser 15870 15960 -1
CDS - ZP_07315990.1 HMPREF9684_1411 metallo-beta-lactamase domain protein 16098 17333 -1
CDS - ZP_07315960.1 HMPREF9684_1412 phosphoribosylformylglycinamidine synthase 17556 21299 -1
CDS lysR ZP_07315977.1 HMPREF9684_1413 LysR substrate binding domain protein 21547 22452 1
CDS xpt ZP_07315951.1 HMPREF9684_1414 xanthine phosphoribosyltransferase 22566 23141 1
CDS - ZP_07315995.1 HMPREF9684_1415 hypothetical protein 23174 23626 1
CDS - ZP_07315923.1 HMPREF9684_1416 hypothetical protein 23636 24076 1
CDS purE ZP_07315932.1 HMPREF9684_1417 phosphoribosylaminoimidazole carboxylase, catalytic subunit 24460 24951 1
CDS purC ZP_07315981.1 HMPREF9684_1418 phosphoribosylaminoimidazolesuccinocarboxamide synthase 24976 25704 1
CDS purF ZP_07315992.1 HMPREF9684_1419 amidophosphoribosyltransferase 25719 27137 1
CDS purM ZP_07315973.1 HMPREF9684_1420 phosphoribosylformylglycinamidine cyclo-ligase 27124 28185 1
CDS purN ZP_07315983.1 HMPREF9684_1421 phosphoribosylglycinamide formyltransferase 28178 28798 1
CDS purH ZP_07315964.1 HMPREF9684_1422 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 28807 30336 1
CDS purD ZP_07315972.1 HMPREF9684_1423 phosphoribosylamine--glycine ligase 30345 31607 1
CDS - ZP_07316005.1 HMPREF9684_1424 isochorismate synthase 31863 32921 1
CDS menD ZP_07315988.1 HMPREF9684_1425 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase 32990 34729 1
CDS menH ZP_07315921.1 HMPREF9684_1426 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 34726 35586 1
CDS menB ZP_07315978.1 HMPREF9684_1427 naphthoate synthase 35592 36434 1
CDS menE ZP_07315999.1 HMPREF9684_1428 O-succinylbenzoate-CoA ligase 36562 37989 1
CDS menC ZP_07315982.1 HMPREF9684_1429 O-succinylbenzoate synthase 37982 39124 1
CDS - ZP_07315949.1 HMPREF9684_1431 hypothetical protein 39121 39498 1
CDS - ZP_07315969.1 HMPREF9684_1430 hypothetical protein 39456 39620 -1
CDS - ZP_07316007.1 HMPREF9684_1432 hypothetical protein 39657 40313 -1
CDS - ZP_07315997.1 HMPREF9684_1433 hypothetical protein 40491 41645 1
tRNA - - HMPREF9684_1434 tRNA-Asp 41945 42020 1
tRNA - - HMPREF9684_1435 tRNA-Phe 42041 42116 1
tRNA - - HMPREF9684_1436 tRNA-Leu 42130 42215 1
CDS - ZP_07315919.1 HMPREF9684_1437 hypothetical protein 42473 43720 1
CDS - ZP_07315913.1 HMPREF9684_1438 hypothetical protein 44372 44584 1
CDS - ZP_07315984.1 HMPREF9684_1439 hydrolase, carbon-nitrogen family 44627 45418 -1
CDS - ZP_07315956.1 HMPREF9684_1440 polysaccharide deacetylase 45595 46401 1
CDS - ZP_07315952.1 HMPREF9684_1441 hypothetical protein 46413 47351 1
CDS - ZP_07315943.1 HMPREF9684_1442 hypothetical protein 47360 48301 1
CDS rfaF ZP_07315941.1 HMPREF9684_1443 lipopolysaccharide heptosyltransferase II 48470 49549 1
CDS - ZP_07315975.1 HMPREF9684_1444 hypothetical protein 49632 49949 1
CDS - ZP_07315926.1 HMPREF9684_1445 putative Methylmalonyl-CoA carboxyltransferase 5S subunit 50440 51792 1
CDS - ZP_07316001.1 HMPREF9684_1446 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein 51931 53274 1
CDS - ZP_07316008.1 HMPREF9684_1447 putative Sensory transduction protein regX3 53267 53956 1
CDS - ZP_07315989.1 HMPREF9684_1448 trypsin 54402 55499 1
CDS - ZP_07315966.1 HMPREF9684_1449 transcriptional regulator, PadR family 55752 56081 1
CDS - ZP_07315928.1 HMPREF9684_1450 hypothetical protein 56068 56643 1
CDS - ZP_07315940.1 HMPREF9684_1451 hypothetical protein 56653 57021 1
CDS pyrE ZP_07315950.1 HMPREF9684_1452 orotate phosphoribosyltransferase 57212 57799 -1
CDS pyrF ZP_07315961.1 HMPREF9684_1453 orotidine 5'-phosphate decarboxylase 57796 58515 -1
CDS - ZP_07316002.1 HMPREF9684_1454 DNA polymerase III, epsilon subunit domain protein 58747 59376 1
CDS deoC ZP_07315948.1 HMPREF9684_1455 deoxyribose-phosphate aldolase 59440 60102 1
CDS pyn ZP_07315922.1 HMPREF9684_1456 pyrimidine-nucleoside phosphorylase 60156 61457 1
CDS cdd ZP_07315927.1 HMPREF9684_1457 cytidine deaminase 61468 61872 1
CDS - ZP_07316003.1 HMPREF9684_1458 lipoprotein, YaeC family 61955 62776 -1
CDS menA ZP_07315954.1 HMPREF9684_1459 1,4-dihydroxy-2-naphthoate octaprenyltransferase 63012 63908 -1
CDS - ZP_07315935.1 HMPREF9684_1460 putative lipoprotein 64111 65055 1
CDS - ZP_07315931.1 HMPREF9684_1461 hypothetical protein 65055 65879 1
CDS - ZP_07315944.1 HMPREF9684_1462 putative endoribonuclease L-PSP 65955 66326 1
CDS - ZP_07315986.1 HMPREF9684_1463 hypothetical protein 66328 67575 1
CDS - ZP_07315915.1 HMPREF9684_1464 transporter, major facilitator family protein 67670 68857 -1
tRNA - - HMPREF9684_1465 tRNA-Ser 69105 69195 -1
CDS - ZP_07315955.1 HMPREF9684_1466 hypothetical protein 69803 70429 1
CDS - ZP_07315947.1 HMPREF9684_1467 hypothetical protein 70569 72368 1
CDS - ZP_07315994.1 HMPREF9684_1468 hypothetical protein 72375 73490 1
CDS dat ZP_07315920.1 HMPREF9684_1469 D-amino-acid transaminase 73699 74556 1
CDS - ZP_07315967.1 HMPREF9684_1470 putative D-methionine ABC transporter, ATP-binding protein 74631 75677 1
CDS metI ZP_07315985.1 HMPREF9684_1471 D-methionine transport system permease protein MetI 75658 76311 1
CDS - ZP_07315939.1 HMPREF9684_1472 TrpR family protein YerC/YecD 76320 76619 1
CDS - ZP_07315963.1 HMPREF9684_1473 hypothetical protein 76755 77549 1
CDS - ZP_07315946.1 HMPREF9684_1474 oxidoreductase, short chain dehydrogenase/reductase family protein 77561 78328 1
CDS - ZP_07315942.1 HMPREF9684_1475 hypothetical protein 78488 79351 1
CDS - ZP_07315987.1 HMPREF9684_1476 hypothetical protein 79366 79704 1
CDS - ZP_07315971.1 HMPREF9684_1477 acyl-CoA thioester hydrolase, YbgC/YbaW family 79822 80241 1
CDS murI ZP_07315918.1 HMPREF9684_1478 glutamate racemase 80234 81043 1
CDS - ZP_07315916.1 HMPREF9684_1479 hypothetical protein 81056 81595 1
CDS - ZP_07315976.1 HMPREF9684_1480 hypothetical protein 81608 82261 1
CDS - ZP_07315925.1 HMPREF9684_1481 hydantoinase/oxoprolinase 82356 84020 1
CDS - ZP_07315953.1 HMPREF9684_1482 histone deacetylase family protein 84007 85380 1
CDS rph ZP_07315938.1 HMPREF9684_1483 tRNA nucleotidyltransferase 85521 86294 1
CDS rdgB ZP_07316000.1 HMPREF9684_1484 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 86296 86877 1
CDS - ZP_07316009.1 HMPREF9684_1485 phosphodiesterase family protein 86874 87371 1
CDS speD ZP_07315974.1 HMPREF9684_1486 S-adenosylmethionine decarboxylase proenzyme 87451 88233 1
CDS - ZP_07315993.1 HMPREF9684_1487 malic enzyme, NAD binding domain protein 88437 89642 1
CDS abiGI ZP_07315957.1 HMPREF9684_1488 abortive infection protein AbiGI 89769 90362 1
tRNA - - HMPREF9684_1489 tRNA-Pro 90547 90623 1
tRNA - - HMPREF9684_1490 tRNA-Gly 90637 90710 1
tRNA - - HMPREF9684_1491 tRNA-Arg 90819 90895 1
CDS - ZP_07315980.1 HMPREF9684_1492 hypothetical protein 91043 91162 1
CDS - ZP_07315962.1 HMPREF9684_1493 toxin-antitoxin system, toxin component, Fic family 91270 91674 -1
CDS - ZP_07315970.1 HMPREF9684_1494 putative chaperone protein ClpB 92167 94374 1