• Summary page

Sequences

• contig00038, whole genome shotgun sequence
• contig00037, whole genome shotgun sequence
• contig00079, whole genome shotgun sequence
• contig00025, whole genome shotgun sequence
• contig00011, whole genome shotgun sequence
• contig00030, whole genome shotgun sequence
• contig00022, whole genome shotgun sequence
• contig00020, whole genome shotgun sequence
• contig00050, whole genome shotgun sequence
• contig00062, whole genome shotgun sequence
• contig00032, whole genome shotgun sequence
• contig00064, whole genome shotgun sequence
• contig00069, whole genome shotgun sequence
• contig00024, whole genome shotgun sequence
• contig00014, whole genome shotgun sequence
• contig00036, whole genome shotgun sequence
• contig00040, whole genome shotgun sequence
• contig00015, whole genome shotgun sequence
• contig00054, whole genome shotgun sequence
• contig00086, whole genome shotgun sequence
• contig00034, whole genome shotgun sequence
• contig00056, whole genome shotgun sequence
• contig00044, whole genome shotgun sequence
• contig00080, whole genome shotgun sequence
• contig00066, whole genome shotgun sequence
• contig00046, whole genome shotgun sequence
• contig00016, whole genome shotgun sequence
• contig00019, whole genome shotgun sequence
• contig00058, whole genome shotgun sequence
• contig00068, whole genome shotgun sequence
• contig00063, whole genome shotgun sequence
• contig00087, whole genome shotgun sequence
• contig00051, whole genome shotgun sequence
• contig00023, whole genome shotgun sequence
• contig00078, whole genome shotgun sequence
• contig00060, whole genome shotgun sequence
• contig00097, whole genome shotgun sequence
• contig00103, whole genome shotgun sequence
• contig00099, whole genome shotgun sequence
• contig00003, whole genome shotgun sequence
• contig00021, whole genome shotgun sequence
• contig00001, whole genome shotgun sequence
• contig00035, whole genome shotgun sequence
• contig00029, whole genome shotgun sequence
• contig00033, whole genome shotgun sequence
• contig00045, whole genome shotgun sequence
• contig00018, whole genome shotgun sequence
• contig00101, whole genome shotgun sequence
• contig00067, whole genome shotgun sequence
• contig00055, whole genome shotgun sequence
• contig00028, whole genome shotgun sequence
• contig00059, whole genome shotgun sequence
• contig00026, whole genome shotgun sequence
• contig00047, whole genome shotgun sequence
• contig00052, whole genome shotgun sequence
• contig00027, whole genome shotgun sequence
• contig00017, whole genome shotgun sequence
• contig00009, whole genome shotgun sequence
• contig00005, whole genome shotgun sequence
• contig00041, whole genome shotgun sequence
• contig00013, whole genome shotgun sequence
• contig00057, whole genome shotgun sequence
• contig00053, whole genome shotgun sequence
• contig00012, whole genome shotgun sequence
• contig00043, whole genome shotgun sequence
• contig00007, whole genome shotgun sequence
• contig00039, whole genome shotgun sequence
• contig00042, whole genome shotgun sequence
• contig00049, whole genome shotgun sequence
• contig00008, whole genome shotgun sequence

Taxonomy

cellular organisms
» Bacteria
» Firmicutes
» Negativicutes
» Selenomonadales
» Veillonellaceae
» Veillonella
» Veillonella atypica

Veillonella atypica ACS-134-V-Col7a

clpP - ATP-dependent Clp protease, proteolytic subunit ClpP

Analysis Tools

View alignment of region with nucmer

Design primers within region using Primer3Plus

View region in Artemis

Retrieve clpP nucleotide sequence in FASTA format

Retrieve clpP protein sequence in FASTA format

Retrieve HMPREF9684_0439 nucleotide sequence with 10 50 100 200 400 600 800 1000 2000 bp. flanking sequence
Include translation of coding sequence
Include complementary strand.

Run NCBI BLASTP PSI-BLAST against the Non-redundant protein sequences (nr) SwissProt Protein Data Bank (PDB) database using HMPREF9684_0439 protein sequence
(optional - restrict search to taxonomic group: root cellular organisms Bacteria Firmicutes Negativicutes Selenomonadales Veillonellaceae Veillonella Veillonella atypica )

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Annotation

Product:

ATP-dependent Clp protease, proteolytic subunit ClpP

GenBank ID: ZP_07316203.1

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