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Veillonella atypica ACS-134-V-Col7a contig00067, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA rrf - HMPREF9684_1646 5S ribosomal RNA 131 247 1
CDS - ZP_07316472.1 HMPREF9684_1647 putative Molybdenum-pterin-binding protein 2 502 711 -1
tRNA - - HMPREF9684_1648 tRNA-Gly 812 885 -1
CDS - ZP_07316377.1 HMPREF9684_1649 PepSY domain protein 1022 2347 1
CDS nhaA_1 ZP_07316450.1 HMPREF9684_1650 Na+/H+ antiporter NhaA 2499 3653 1
CDS nhaA_2 ZP_07316446.1 HMPREF9684_1651 Na+/H+ antiporter NhaA 3682 4854 1
CDS - ZP_07316418.1 HMPREF9684_1652 3D domain protein 4879 5484 1
CDS purR ZP_07316490.1 HMPREF9684_1653 pur operon repressor PurR 5625 6449 1
CDS glmU ZP_07316397.1 HMPREF9684_1654 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6459 7832 1
CDS prs ZP_07316312.1 HMPREF9684_1655 ribose-phosphate diphosphokinase 7972 8925 1
CDS pth ZP_07316385.1 HMPREF9684_1656 aminoacyl-tRNA hydrolase 8936 9514 1
CDS - ZP_07316437.1 HMPREF9684_1657 putative arginine 2-monooxygenase 9573 11054 1
CDS - ZP_07316405.1 HMPREF9684_1658 dTMP kinase 11057 11743 1
CDS - ZP_07316347.1 HMPREF9684_1659 hypothetical protein 11833 12873 1
CDS - ZP_07316402.1 HMPREF9684_1660 PSP1 C-terminal domain protein 12874 13719 1
CDS - ZP_07316395.1 HMPREF9684_1661 methyltransferase small domain protein 13712 14440 1
CDS - ZP_07316334.1 HMPREF9684_1662 S-adenosylmethionine-dependent methyltransferase, YraL family 14427 15272 1
CDS metG ZP_07316379.1 HMPREF9684_1663 methionine--tRNA ligase 15307 17256 1
CDS - ZP_07316320.1 HMPREF9684_1664 hydrolase, TatD family 17256 18026 1
CDS - ZP_07316390.1 HMPREF9684_1665 putative exopolyphosphatase 18178 19713 1
CDS - ZP_07316478.1 HMPREF9684_1666 hypothetical protein 19723 21273 1
CDS ppk ZP_07316409.1 HMPREF9684_1667 polyphosphate kinase 1 21275 23392 1
CDS - ZP_07316464.1 HMPREF9684_1668 3D domain protein 23809 24780 1
CDS msrB ZP_07316470.1 HMPREF9684_1669 methionine-R-sulfoxide reductase 24900 25835 -1
CDS - ZP_07316345.1 HMPREF9684_1670 methionine synthase, vitamin-B12 independent 25836 26957 -1
CDS - ZP_07316410.1 HMPREF9684_1671 transcriptional regulator, LysR family 27179 28114 -1
CDS rnmV ZP_07316448.1 HMPREF9684_1672 ribonuclease M5 28223 28753 1
CDS ksgA ZP_07316481.1 HMPREF9684_1673 dimethyladenosine transferase 28811 29665 1
CDS - ZP_07316300.1 HMPREF9684_1674 putative sodium/glutamate symporter 29740 30987 -1
CDS prfC ZP_07316363.1 HMPREF9684_1675 peptide chain release factor 3 31223 32818 -1
CDS - ZP_07316488.1 HMPREF9684_1676 DNA topoisomerase 32995 35307 1
CDS - ZP_07316388.1 HMPREF9684_1677 putative DEAD-box ATP-dependent RNA helicase CshA 35359 36657 -1
CDS feoA ZP_07316384.1 HMPREF9684_1678 FeoA domain protein 37175 37408 1
CDS feoB ZP_07316474.1 HMPREF9684_1679 ferrous iron transport protein B 37418 39787 1
CDS - ZP_07316427.1 HMPREF9684_1680 hypothetical protein 40020 40214 1
CDS - ZP_07316364.1 HMPREF9684_1681 hypothetical protein 40317 40577 1
CDS - ZP_07316396.1 HMPREF9684_1682 heavy metal translocating P-type ATPase 40593 42728 1
CDS - ZP_07316314.1 HMPREF9684_1683 transposase 42926 44158 1
CDS - ZP_07316380.1 HMPREF9684_1684 hypothetical protein 44272 44679 1
CDS - ZP_07316431.1 HMPREF9684_1685 hypothetical protein 44672 45511 1
CDS - ZP_07316350.1 HMPREF9684_1686 hypothetical protein 45568 46245 1
CDS - ZP_07316480.1 HMPREF9684_1687 rSAM-modified six-cysteine peptide 46317 46460 1
CDS - ZP_07316330.1 HMPREF9684_1688 six-Cys-in-45 modification radical SAM protein 46629 48038 1
CDS hypF ZP_07316423.1 HMPREF9684_1689 carbamoyltransferase HypF 48077 50374 1
CDS hypC ZP_07316442.1 HMPREF9684_1690 hydrogenase assembly chaperone HypC/HupF 50489 50740 1
CDS hypD ZP_07316319.1 HMPREF9684_1691 hydrogenase expression/formation protein HypD 50715 51818 1
CDS - ZP_07316462.1 HMPREF9684_1692 putative hydrogenase expression/formation protein HypE 51819 52220 1
CDS - ZP_07316357.1 HMPREF9684_1693 putative hydrogenase expression/formation protein HypE 52258 52827 1
CDS - ZP_07316458.1 HMPREF9684_1694 hypothetical protein 53013 53459 1
CDS - ZP_07316340.1 HMPREF9684_1695 hypothetical protein 53574 54704 1
CDS - ZP_07316389.1 HMPREF9684_1696 OstA-like protein 54720 56270 1
CDS galU ZP_07316335.1 HMPREF9684_1697 UTP--glucose-1-phosphate uridylyltransferase 56282 57142 1
CDS - ZP_07316413.1 HMPREF9684_1698 hypothetical protein 57321 57863 1
CDS - ZP_07316299.1 HMPREF9684_1699 BioY family protein 57888 58400 1
CDS - ZP_07316421.1 HMPREF9684_1700 acetyl-CoA C-acetyltransferase 58459 59565 1
CDS - ZP_07316341.1 HMPREF9684_1701 AMP-binding enzyme 59580 60869 1
CDS - ZP_07316328.1 HMPREF9684_1702 hypothetical protein 60894 61892 1
CDS - ZP_07316325.1 HMPREF9684_1703 YbaK/EbsC protein 61904 62395 1
CDS rnhA ZP_07316342.1 HMPREF9684_1704 ribonuclease HI 62404 63066 1
CDS rmlD_1 ZP_07316479.1 HMPREF9684_1705 RmlD substrate binding domain protein 63084 64001 1
CDS - ZP_07316360.1 HMPREF9684_1706 hypothetical protein 64039 64290 1
CDS pgi ZP_07316489.1 HMPREF9684_1707 glucose-6-phosphate isomerase 64303 65730 1
CDS galE ZP_07316315.1 HMPREF9684_1708 UDP-glucose 4-epimerase 65752 66741 1
CDS - ZP_07316456.1 HMPREF9684_1709 hypothetical protein 66888 67535 1
CDS - ZP_07316327.1 HMPREF9684_1710 bacterial type II and III secretion system protein 67511 68710 1
CDS - ZP_07316344.1 HMPREF9684_1712 ABC transporter, ATP-binding protein 68743 70659 1
CDS - ZP_07316438.1 HMPREF9684_1711 hypothetical protein 70651 70809 -1
CDS - ZP_07316302.1 HMPREF9684_1713 receptor family ligand-binding protein 70808 71956 1
CDS - ZP_07316430.1 HMPREF9684_1714 branched-chain amino acid ABC transporter, permease protein 71973 72854 1
CDS - ZP_07316307.1 HMPREF9684_1715 branched-chain amino acid ABC transporter, permease protein 72854 73864 1
CDS - ZP_07316475.1 HMPREF9684_1716 ABC transporter, ATP-binding protein 73877 74638 1
CDS - ZP_07316352.1 HMPREF9684_1717 ABC transporter, ATP-binding protein 74640 75350 1
CDS - ZP_07316346.1 HMPREF9684_1718 polysaccharide biosynthesis/export protein 75708 76406 1
CDS - ZP_07316459.1 HMPREF9684_1719 putative epimerase/dehydratase WbiI 76453 78279 1
CDS - ZP_07316424.1 HMPREF9684_1720 chain length determinant protein 78330 79769 1
CDS - ZP_07316374.1 HMPREF9684_1721 capsular exopolysaccharide family protein 79771 80391 1
CDS - ZP_07316484.1 HMPREF9684_1722 DegT/DnrJ/EryC1/StrS aminotransferase family protein 80414 81613 1
CDS - ZP_07316372.1 HMPREF9684_1723 bacterial sugar transferase 81610 82296 1
CDS - ZP_07316441.1 HMPREF9684_1724 LICD family protein 82306 83166 1
CDS - ZP_07316460.1 HMPREF9684_1725 putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 83184 83903 1
CDS - ZP_07316401.1 HMPREF9684_1726 NAD-binding protein 83884 84951 1
CDS - ZP_07316295.1 HMPREF9684_1727 glycosyltransferase, group 1 family protein 84944 86011 1
CDS - ZP_07316324.1 HMPREF9684_1728 LPXTG-motif cell wall anchor domain protein 86059 87330 1
CDS - ZP_07316353.1 HMPREF9684_1729 hypothetical protein 87284 88216 1
CDS - ZP_07316408.1 HMPREF9684_1730 hypothetical protein 88194 88379 1
CDS - ZP_07316386.1 HMPREF9684_1731 polysaccharide biosynthesis protein 88396 89847 1
CDS rmlD_2 ZP_07316400.1 HMPREF9684_1732 RmlD substrate binding domain protein 89863 90957 1
CDS - ZP_07316318.1 HMPREF9684_1733 nucleotide sugar dehydrogenase 90958 92124 1
CDS - ZP_07316326.1 HMPREF9684_1734 VanZ-like protein 92140 92586 1
CDS - ZP_07316422.1 HMPREF9684_1735 hypothetical protein 92834 93649 1
CDS nrdD ZP_07316304.1 HMPREF9684_1736 anaerobic ribonucleoside-triphosphate reductase 93899 96049 1
CDS nrdG ZP_07316394.1 HMPREF9684_1737 anaerobic ribonucleoside-triphosphate reductase activating protein 96178 96675 1
CDS - ZP_07316317.1 HMPREF9684_1738 chloride transporter, ClC family 96686 97918 1
CDS - ZP_07316417.1 HMPREF9684_1739 bacterial transferase hexapeptide repeat protein 98053 98601 -1
CDS - ZP_07316332.1 HMPREF9684_1740 putative enoyl-[acyl-carrier-protein] reductase II 98613 99566 -1
CDS - ZP_07316414.1 HMPREF9684_1741 rubredoxin 99871 100005 1
CDS - ZP_07316486.1 HMPREF9684_1742 hypothetical protein 100107 100622 1
CDS rpmF ZP_07316382.1 HMPREF9684_1743 ribosomal protein L32 100648 100824 1
CDS - ZP_07316461.1 HMPREF9684_1744 putative Transcription factor FapR 101071 101634 1
CDS plsX ZP_07316336.1 HMPREF9684_1745 fatty acid/phospholipid synthesis protein PlsX 101638 102666 1