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Veillonella atypica ACS-134-V-Col7a contig00049, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_07317011.1 HMPREF9684_1093 transporter, major facilitator family protein 354 1529 -1
CDS secF ZP_07316989.1 HMPREF9684_1094 export membrane protein SecF 1673 2563 -1
CDS secD ZP_07316979.1 HMPREF9684_1095 export membrane protein SecD 2560 3834 -1
CDS - ZP_07316972.1 HMPREF9684_1096 5-formyltetrahydrofolate cyclo-ligase 3850 4416 -1
CDS yajC ZP_07316992.1 HMPREF9684_1097 preprotein translocase, YajC subunit 4416 4706 -1
CDS tgt ZP_07316956.1 HMPREF9684_1098 tRNA-guanine transglycosylase 4785 5900 -1
CDS queA ZP_07316967.1 HMPREF9684_1099 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 5909 6934 -1
CDS - ZP_07316934.1 HMPREF9684_1100 SpoIID/LytB domain protein 6943 8535 -1
CDS ruvB ZP_07316997.1 HMPREF9684_1101 Holliday junction DNA helicase RuvB 8537 9541 -1
CDS ruvA ZP_07316984.1 HMPREF9684_1102 Holliday junction DNA helicase RuvA 9544 10152 -1
CDS ruvC ZP_07316978.1 HMPREF9684_1103 crossover junction endodeoxyribonuclease RuvC 10149 10646 -1
CDS - ZP_07316959.1 HMPREF9684_1104 DNA-binding regulatory protein, YebC/PmpR family 10833 11570 -1
CDS - ZP_07316960.1 HMPREF9684_1105 hypothetical protein 11580 12152 -1
CDS - ZP_07316982.1 HMPREF9684_1106 hypothetical protein 12210 12770 -1
CDS - ZP_07317007.1 HMPREF9684_1107 hypothetical protein 12782 13213 -1
CDS - ZP_07316953.1 HMPREF9684_1108 hypothetical protein 13224 14294 -1
CDS - ZP_07316954.1 HMPREF9684_1109 glutathionylspermidine synthase 14399 15706 -1
CDS - ZP_07316995.1 HMPREF9684_1110 hypothetical protein 15721 16293 -1
CDS - ZP_07317006.1 HMPREF9684_1111 hypothetical protein 16338 17384 -1
CDS trmD ZP_07316990.1 HMPREF9684_1112 tRNA (guanine-N(1)-)-methyltransferase 17381 18196 -1
CDS rimM ZP_07316933.1 HMPREF9684_1113 16S rRNA processing protein RimM 18311 18808 -1
CDS - ZP_07316938.1 HMPREF9684_1114 hypothetical protein 18808 19215 -1
CDS - ZP_07317003.1 HMPREF9684_1115 hypothetical protein 19230 19457 -1
CDS rpsP ZP_07316937.1 HMPREF9684_1116 ribosomal protein S16 19479 19742 -1
CDS ffh ZP_07316964.1 HMPREF9684_1117 signal recognition particle protein 19801 21153 -1
CDS - ZP_07316947.1 HMPREF9684_1118 HTH DNA binding domain protein 21155 21478 -1
CDS - ZP_07316957.1 HMPREF9684_1119 pyridine nucleotide-disulfide oxidoreductase 21668 22993 1
CDS - ZP_07316944.1 HMPREF9684_1120 hypothetical protein 23123 23650 -1
CDS - ZP_07316966.1 HMPREF9684_1121 copper-exporting ATPase 23826 26000 -1
CDS - ZP_07316949.1 HMPREF9684_1122 uncharacterized protein, YigZ family 26340 26990 1
CDS - ZP_07316980.1 HMPREF9684_1123 hypothetical protein 27019 27207 -1
CDS lysR ZP_07316983.1 HMPREF9684_1124 LysR substrate binding domain protein 27398 28288 1
CDS - ZP_07316986.1 HMPREF9684_1125 dihydroorotate dehydrogenase 1B 28378 29328 -1
CDS - ZP_07316981.1 HMPREF9684_1126 putative dihydroorotate oxidase, electron transfer subunit 29328 30095 -1
CDS carB ZP_07316988.1 HMPREF9684_1127 carbamoyl-phosphate synthase, large subunit 30100 33300 -1
CDS carA ZP_07316993.1 HMPREF9684_1128 carbamoyl-phosphate synthase, small subunit 33302 34369 -1
CDS - ZP_07316936.1 HMPREF9684_1129 amidohydrolase family protein 34369 35655 -1
CDS pyrB ZP_07316955.1 HMPREF9684_1130 aspartate carbamoyltransferase 35639 36589 -1
CDS - ZP_07316963.1 HMPREF9684_1132 hypothetical protein 36879 39560 -1
CDS - ZP_07316932.1 HMPREF9684_1133 hypothetical protein 39565 40512 -1
CDS - ZP_07316976.1 HMPREF9684_1134 hypothetical protein 40525 41874 -1
CDS - ZP_07316974.1 HMPREF9684_1135 hypothetical protein 41886 42797 -1
CDS - ZP_07316951.1 HMPREF9684_1136 Cof-like hydrolase 42809 43621 -1
CDS - ZP_07316965.1 HMPREF9684_1137 hypothetical protein 43729 44949 -1
CDS - ZP_07316930.1 HMPREF9684_1138 hypothetical protein 45509 46771 -1
CDS - ZP_07317012.1 HMPREF9684_1139 hypothetical protein 47234 48505 -1
CDS lepB ZP_07316991.1 HMPREF9684_1140 signal peptidase I 48758 49330 -1
CDS - ZP_07316952.1 HMPREF9684_1141 hypothetical protein 49341 50225 -1
CDS - ZP_07316968.1 HMPREF9684_1142 hypothetical protein 50203 50727 -1
CDS - ZP_07316996.1 HMPREF9684_1143 hypothetical protein 50824 52032 -1
CDS - ZP_07317009.1 HMPREF9684_1144 permease, YjgP/YjgQ family 52078 53169 -1
CDS lptB ZP_07316969.1 HMPREF9684_1145 lipopolysaccharide ABC transporter, ATP-binding protein LptB 53178 53897 -1
CDS - ZP_07316973.1 HMPREF9684_1146 OstA-like protein 53911 54630 -1
CDS - ZP_07316962.1 HMPREF9684_1147 hypothetical protein 54646 55182 -1
CDS - ZP_07316941.1 HMPREF9684_1148 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 55169 56101 -1
CDS - ZP_07317000.1 HMPREF9684_1149 putative 3-deoxy-manno-octulosonate-8-phosphatase 56116 56637 -1
CDS - ZP_07316946.1 HMPREF9684_1150 putative arabinose 5-phosphate isomerase 56637 57608 -1
CDS kdsA ZP_07316975.1 HMPREF9684_1151 3-deoxy-8-phosphooctulonate synthase 57621 58439 -1
CDS kdsB ZP_07316939.1 HMPREF9684_1152 3-deoxy-D-manno-octulosonate cytidylyltransferase 58440 59171 -1
CDS lpxK ZP_07316950.1 HMPREF9684_1153 tetraacyldisaccharide 4'-kinase 59216 60328 -1
CDS - ZP_07316985.1 HMPREF9684_1154 putative 3-deoxy-D-manno-octulosonic-acid transferase 60368 61672 -1
CDS - ZP_07317008.1 HMPREF9684_1155 putative lipid A export permease/ATP-binding protein MsbA 61675 63405 -1
CDS lpxB ZP_07316940.1 HMPREF9684_1156 lipid-A-disaccharide synthase 63398 64540 -1
CDS - ZP_07317001.1 HMPREF9684_1157 hypothetical protein 64540 65376 -1
CDS lpxA ZP_07316961.1 HMPREF9684_1158 acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferase 65635 66447 -1
CDS fabZ ZP_07316943.1 HMPREF9684_1159 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 66469 66894 -1
CDS lpxC ZP_07316998.1 HMPREF9684_1160 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 66891 67730 -1
CDS - ZP_07316931.1 HMPREF9684_1161 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 67910 68812 -1
CDS lpxD ZP_07316971.1 HMPREF9684_1162 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 68820 69851 -1
CDS - ZP_07316942.1 HMPREF9684_1163 outer membrane protein 69882 70412 -1
CDS - ZP_07317004.1 HMPREF9684_1164 hypothetical protein 70423 71391 -1
CDS - ZP_07317010.1 HMPREF9684_1165 gram-positive signal peptide protein, YSIRK family 71428 71898 -1
CDS - ZP_07316935.1 HMPREF9684_1166 hypothetical protein 71891 72004 -1
CDS - ZP_07317002.1 HMPREF9684_1167 outer membrane protein, OMP85 family 72019 74196 -1
CDS - ZP_07317013.1 HMPREF9684_1168 phage prohead protease, HK97 family 74353 78642 -1
CDS - ZP_07316994.1 HMPREF9684_1169 outer membrane efflux protein 78830 80320 -1
CDS - ZP_07316999.1 HMPREF9684_1170 virulence factor Mce family protein 80347 81606 -1
CDS - ZP_07316977.1 HMPREF9684_1171 ABC transporter, ATP-binding protein 81606 82364 -1
CDS - ZP_07316958.1 HMPREF9684_1172 hypothetical protein 82389 83150 -1
CDS - ZP_07316970.1 HMPREF9684_1173 SpoIVB peptidase S55 83187 85214 -1
CDS - ZP_07316987.1 HMPREF9684_1174 hypothetical protein 85226 85510 -1
CDS - ZP_07317005.1 HMPREF9684_1175 putative lipoprotein 85596 86936 -1
CDS ftsA ZP_07316945.1 HMPREF9684_1176 cell division protein FtsA 87137 88366 -1
CDS murA ZP_07316948.1 HMPREF9684_1177 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 88416 89681 -1