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Vibrio cholera CIRS 101, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - VCH_rna008 16S ribosomal RNA 1 497 1
tRNA - - VCH_rna009 tRNA-Glu 566 641 1
tRNA - - VCH_rna010 tRNA-Lys 661 735 1
tRNA - - VCH_rna011 tRNA-Val 766 841 1
rRNA - - VCH_rna012 23S ribosomal RNA 1184 4071 1
rRNA - - VCH_rna013 5S ribosomal RNA 4200 4319 1
tRNA - - VCH_rna014 tRNA-Asp 4343 4419 1
CDS - ZP_05417732.1 VCH_000068 hypothetical protein 4893 6227 -1
CDS - ZP_05417733.1 VCH_000069 5-methyltetrahydrofolate--homocysteine methyltransferase 6424 10104 1
CDS - ZP_05417734.1 VCH_000070 aspartokinase 10177 11532 -1
CDS - ZP_05417735.1 VCH_000071 serine--pyruvate aminotransferase/L-alanine:glyoxylate aminotransferase 11996 13114 1
CDS - ZP_05417736.1 VCH_000072 lipid A core-O-antigen ligase 13193 14977 -1
CDS - ZP_05417737.1 VCH_000073 excinuclease ABC subunit A 15042 17864 -1
CDS - ZP_05417738.1 VCH_000074 UTP--glucose-1-phosphate uridylyltransferase 18020 18826 -1
CDS - ZP_05417739.1 VCH_000075 DNA-binding HTH domain-containing protein 19065 19709 -1
CDS - ZP_05417740.1 VCH_000076 single-stranded DNA-binding protein 20001 20534 1
CDS - ZP_05417741.1 VCH_000078 MSHA biogenesis protein MshI 22683 24122 1
CDS - ZP_05417742.1 VCH_000079 MSHA biogenesis protein MshJ 24119 24769 1
CDS - ZP_05417743.1 VCH_000080 MSHA biogenesis protein MshK 24783 25079 1
CDS - ZP_05417744.1 VCH_000081 MSHA biogenesis protein MshL 25094 26773 1
CDS - ZP_05417745.1 VCH_000082 MSHA biogenesis protein MshM 26778 27623 1
CDS - ZP_05417746.1 VCH_000083 MSHA biogenesis protein MshN 27620 28771 1
CDS - ZP_05417747.1 VCH_000084 MSHA biogenesis protein MshE 28761 30488 1
CDS - ZP_05417748.1 VCH_000085 MSHA biogenesis protein MshG 30497 31720 1
CDS - ZP_05417749.1 VCH_000086 MSHA biogenesis protein MshF 31723 32175 1
CDS - ZP_05417750.1 VCH_000087 MSHA pilin protein MshB 32220 32810 1
CDS - ZP_05417751.1 VCH_000088 MSHA pilin protein MshA 32845 33372 1
CDS - ZP_05417752.1 VCH_000089 MSHA pilin protein MshC 33409 33897 1
CDS - ZP_05417753.1 VCH_000090 MSHA pilin protein MshD 33887 34456 1
CDS - ZP_05417754.1 VCH_000091 MSHA biogenesis protein MshO 34456 35226 1
CDS - ZP_05417755.1 VCH_000092 MSHA biogenesis protein MshP 35201 35623 1
CDS - ZP_05417756.1 VCH_000093 MSHA biogenesis protein MshQ 35616 39374 1
CDS - ZP_05417757.1 VCH_000094 rod shape-determining protein MreB 39542 40585 1
CDS - ZP_05417758.1 VCH_000095 rod shape-determining protein MreC 40642 41532 1
CDS - ZP_05417759.1 VCH_000096 rod shape-determining protein MreD 41519 42007 1
CDS - ZP_05417760.1 VCH_000097 septum formation protein Maf 42067 42567 1
CDS - ZP_05417761.1 VCH_000098 cytoplasmic axial filament protein CafA and Ribonuclease G 42593 44062 1
CDS - ZP_05417762.1 VCH_000099 possible exported protein 44111 47950 1
CDS - ZP_05417763.1 VCH_000100 predicted amidohydrolase 47959 48786 1
CDS - ZP_05417764.1 VCH_000101 TldD protein probably a protease 48786 50231 1
CDS - ZP_05417765.1 VCH_000102 arginine deiminase 50327 51550 -1
CDS - ZP_05417766.1 VCH_000103 hypothetical protein 52277 52699 1
CDS - ZP_05417767.1 VCH_000104 beta-galactosidase/beta-glucuronidase 52846 53643 1
CDS - ZP_05417768.1 VCH_000105 hypothetical protein 53712 54095 -1
CDS - ZP_05417769.1 VCH_000106 universal stress protein family 3 54246 54683 -1
CDS - ZP_05417770.1 VCH_000107 TRAP-type uncharacterized transport system fused permease component 54805 57369 -1
CDS - ZP_05417771.1 VCH_000108 TRAP transporter solute receptor TAXI family precursor 57540 58508 -1
CDS - ZP_05417772.1 VCH_000109 arginine pathway regulatory protein ArgR repressor of arg regulon 58832 59350 -1
CDS - ZP_05417773.1 VCH_000110 malate dehydrogenase 59630 60565 1
CDS - ZP_05417774.1 VCH_000113 octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferase/ geranylgeranyl pyrophosphate synthetase 62594 63565 -1
CDS - ZP_05417775.1 VCH_000114 LSU ribosomal protein L21p 63836 64147 1
CDS - ZP_05417776.1 VCH_000115 LSU ribosomal protein L27p 64168 64428 1
CDS - ZP_05417777.1 VCH_000116 GTP-binding protein Obg 64623 65795 1
CDS - ZP_05417778.1 VCH_000117 hypothetical protein 65917 66678 1
CDS - ZP_05417779.1 VCH_000118 hypothetical protein 66678 67151 1
CDS - ZP_05417780.1 VCH_000119 dihydrofolate reductase 67164 67661 1
CDS - ZP_05417781.1 VCH_000120 bis(5'-nucleosyl)-tetraphosphatase symmetrical 67810 68619 -1
CDS - ZP_05417782.1 VCH_000121 ApaG protein 68630 69010 -1
CDS - ZP_05417783.1 VCH_000122 dimethyladenosine transferase 69082 69897 -1
CDS - ZP_05417784.1 VCH_000123 4-hydroxythreonine-4-phosphate dehydrogenase 69911 70903 -1
CDS - ZP_05417785.1 VCH_000124 peptidyl-prolyl cis-trans isomerase SurA 70893 72188 -1
CDS - ZP_05417786.1 VCH_000125 Imp required for envelope biogenesis/organic solvent tolerance protein precursor 72241 74592 -1
CDS - ZP_05417787.1 VCH_000126 DnaJ-like protein DjlA 74751 75605 1
tRNA - - VCH_rna015 tRNA-Asn 75760 75835 -1