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Vibrio cholera CIRS 101, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05417788.1 VCH_000127 ClpB protein 249 2822 -1
CDS - ZP_05417789.1 VCH_000128 hypothetical protein 2947 3669 -1
CDS - ZP_05417790.1 VCH_000129 ribosomal large subunit pseudouridine synthase D 3672 4646 -1
CDS - ZP_05417791.1 VCH_000130 probable component of the lipoprotein assembly complex (forms a complex with YaeT YfgL and NlpB) 4801 5526 1
CDS - ZP_05417792.1 VCH_000131 hypothetical protein 5521 5634 -1
CDS - ZP_05417793.1 VCH_000132 ribosome hibernation protein YfiA 5928 6254 1
CDS - ZP_05417794.1 VCH_000133 chorismate mutase I/prephenate dehydratase 6494 7669 1
CDS - ZP_05417795.1 VCH_000134 predicted polyamine sensor NspS involved in biofilm formation 7851 8891 1
CDS - ZP_05417796.1 VCH_000135 C-di-GMP phosphodiesterase MbaA repressor of biofilm formation 8875 11250 1
CDS - ZP_05417797.1 VCH_000136 hypothetical protein 11237 11722 1
CDS - ZP_05417798.1 VCH_000137 Trp operon repressor-like protein 11800 12111 -1
CDS - ZP_05417799.1 VCH_000138 soluble lytic murein transglycosylase precursor 12166 14112 -1
CDS - ZP_05417800.1 VCH_000139 ABC transporter ATP-binding protein 14474 16141 1
CDS - ZP_05417801.1 VCH_000140 hypothetical protein 16312 16683 1
CDS - ZP_05417802.1 VCH_000141 chorismate mutase I/cyclohexadienyl dehydrogenase 16750 17877 -1
CDS - ZP_05417803.1 VCH_000142 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha 17890 18963 -1
CDS - ZP_05417804.1 VCH_000143 autolysin sensor kinase 19205 20881 1
CDS - ZP_05417805.1 VCH_000144 response regulator of the LytR/AlgR family 20891 21604 1
CDS - ZP_05417806.1 VCH_000145 beta N-acetyl-glucosaminidase 21631 22623 -1
CDS - ZP_05417807.1 VCH_000146 anhydro-N-acetylmuramic acid kinase 22729 23841 1
CDS - ZP_05417808.1 VCH_000147 N-acetylmuramic acid 6-phosphate etherase 23859 24782 1
CDS - ZP_05417809.1 VCH_000148 NhaP-type Na+/H+ and K+/H+ antiporter 24806 26602 -1
CDS - ZP_05417810.1 VCH_000149 hypothetical protein 26621 26944 -1
CDS - ZP_05417811.1 VCH_000150 carbon starvation protein A 27215 28699 1
CDS - ZP_05417812.1 VCH_000151 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 28836 29786 -1
CDS - ZP_05417813.1 VCH_000152 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA 29833 30267 -1
CDS - ZP_05417814.1 VCH_000153 lipoprotein signal peptidase 30430 30945 -1
CDS - ZP_05417815.1 VCH_000154 isoleucyl-tRNA synthetase 30961 33810 -1
CDS - ZP_05417816.1 VCH_000155 riboflavin kinase/FMN adenylyltransferase 33841 34809 -1
CDS - ZP_05417817.1 VCH_000156 hypothetical protein 34878 36440 -1
CDS - ZP_05417818.1 VCH_000157 SSU ribosomal protein S20p 36698 36958 1
CDS - ZP_05417819.1 VCH_000158 transcriptional activator HlyU 37027 37353 -1
CDS - ZP_05417820.1 VCH_000159 transcriptional activator NhaR 37552 38442 -1
CDS - ZP_05417821.1 VCH_000160 sodium-dependent phosphate transporter 38837 39985 1
CDS - ZP_05417822.1 VCH_000161 thymidylate synthase 40078 40929 -1
CDS - ZP_05417823.1 VCH_000162 prolipoprotein diacylglyceryl transferase 40939 41754 -1
CDS - ZP_05417824.1 VCH_000163 hypothetical protein 41783 42577 -1
CDS - ZP_05417825.1 VCH_000166 adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase 44837 45355 -1
CDS - ZP_05417826.1 VCH_000167 hypothetical protein 45378 45524 -1
CDS - ZP_05417827.1 VCH_000168 DNA mismatch repair endonuclease MutH 45986 46651 1
CDS - ZP_05417828.1 VCH_000169 oxidoreductase Tas aldo/keto reductase family 46868 47902 1
CDS - ZP_05417829.1 VCH_000170 hypothetical protein 47940 48191 -1
CDS - ZP_05417830.1 VCH_000171 hypothetical protein 48504 48632 -1
CDS - ZP_05417831.1 VCH_000172 transcriptional regulator VpsR 48769 50103 -1
CDS - ZP_05417832.1 VCH_000173 lysyl-tRNA synthetase (class II) 50377 51909 -1
CDS - ZP_05417833.1 VCH_000174 peptide chain release factor 2 51940 52839 -1
CDS - ZP_05417834.1 VCH_000175 branched-chain amino acid transport system carrier protein 53208 54521 -1
CDS - ZP_05417835.1 VCH_000176 predicted O-methyltransferase 54830 55552 1
CDS - ZP_05417836.1 VCH_000177 ATP-dependent RNA helicase SrmB 55640 56911 1
CDS - ZP_05417837.1 VCH_000178 peptide chain release factor 3 57033 58622 -1
CDS - ZP_05417838.1 VCH_000179 putative prophage repressor 58879 59526 -1
CDS - ZP_05417839.1 VCH_000180 uncharacterized protein conserved in bacteria prophage-related 59644 59895 1
CDS - ZP_05417840.1 VCH_000181 hypothetical protein 59951 60820 1
CDS - ZP_05417841.1 VCH_000182 hypothetical protein 60807 61469 1
CDS - ZP_05417842.1 VCH_000183 soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 61456 62004 1
CDS - ZP_05417843.1 VCH_000184 transcriptional activator 62001 62300 1
CDS - ZP_05417844.1 VCH_000185 IncF plasmid conjugative transfer protein TraG 63352 66921 -1
CDS - ZP_05417845.1 VCH_000186 IncF plasmid conjugative transfer pilus assembly protein TraH 66925 68313 -1
CDS - ZP_05417846.1 VCH_000187 IncF plasmid conjugative transfer pilus assembly protein TraF 68316 69248 -1
CDS - ZP_05417847.1 VCH_000188 integron integrase 69517 70476 -1