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Vibrio cholera CIRS 101, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05417848.1 VCH_000189 RNA-binding protein 466 924 1
CDS - ZP_05417849.1 VCH_000190 glutamate racemase 890 1687 -1
CDS - ZP_05417850.1 VCH_000191 alkaline serine exoprotease A precursor 2080 3687 1
CDS - ZP_05417851.1 VCH_000192 outer membrane vitamin B12 receptor BtuB 3760 5595 -1
CDS - ZP_05417852.1 VCH_000193 tRNA (uracil-5-)-methyltransferase 5993 7102 1
CDS - ZP_05417853.1 VCH_000194 ATPase of the AAA+ class 7139 7510 -1
CDS - ZP_05417854.1 VCH_000195 unsaturated fatty acid biosythesis repressor FabR 7550 8191 -1
CDS - ZP_05417855.1 VCH_000196 soluble pyridine nucleotide transhydrogenase 8499 9899 1
CDS - ZP_05417856.1 VCH_000197 RNA polymerase sigma factor RpoH 10101 10961 -1
CDS - ZP_05417857.1 VCH_000198 cell division protein FtsX 11131 12123 -1
CDS - ZP_05417858.1 VCH_000199 cell division transporter ATP-binding protein FtsE 12113 12787 -1
CDS - ZP_05417859.1 VCH_000200 signal recognition particle receptor protein FtsY 12836 14011 -1
CDS - ZP_05417860.1 VCH_000201 ribosomal RNA small subunit methyltransferase D 14305 14814 1
CDS - ZP_05417861.1 VCH_000202 hypothetical protein 14811 15077 1
CDS - ZP_05417862.1 VCH_000205 hypothetical protein 15873 16130 -1
CDS - ZP_05417863.1 VCH_000206 hypothetical protein 16633 17001 -1
CDS - ZP_05417864.1 VCH_000207 hypothetical protein 17206 17535 1
CDS - ZP_05417865.1 VCH_000208 non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase 17705 18175 1
CDS - ZP_05417866.1 VCH_000209 predicted signal transduction protein 18355 19581 -1
CDS - ZP_05417867.1 VCH_000210 putative threonine efflux protein 19601 20218 -1
CDS - ZP_05417868.1 VCH_000211 lysophospholipase L2 20293 21309 1
CDS - ZP_05417869.1 VCH_000212 hydrolase (HAD superfamily) 21385 22251 1
CDS - ZP_05417870.1 VCH_000213 predicted membrane protein 22535 24079 1
CDS - ZP_05417871.1 VCH_000214 hypothetical protein 24076 24672 1
CDS - ZP_05417872.1 VCH_000215 sensory box/GGDEF family protein 24705 27134 -1
CDS - ZP_05417873.1 VCH_000216 2-haloalkanoic acid dehalogenase 27304 28023 -1
CDS - ZP_05417874.1 VCH_000217 tyrosine recombinase XerC 28026 28961 -1
CDS - ZP_05417875.1 VCH_000218 hypothetical protein 28930 29628 -1
CDS - ZP_05417876.1 VCH_000219 diaminopimelate epimerase 29642 30472 -1
CDS - ZP_05417877.1 VCH_000220 diaminopimelate decarboxylase 30484 31737 -1
CDS - ZP_05417878.1 VCH_000221 hypothetical protein 31770 31886 -1
CDS - ZP_05417879.1 VCH_000222 frataxin CyaY 31962 32276 1
CDS - ZP_05417880.1 VCH_000223 adenylate cyclase 32382 35036 -1
CDS - ZP_05417881.1 VCH_000224 porphobilinogen deaminase 35270 36205 1
CDS - ZP_05417882.1 VCH_000225 uroporphyrinogen-III synthase 36266 37033 1
CDS - ZP_05417883.1 VCH_000226 HemX-like protein 37017 38216 1
CDS - ZP_05417884.1 VCH_000227 HemY-like protein 38261 39409 1
CDS - ZP_05417885.1 VCH_000228 coproporphyrinogen III oxidase oxygen-independent 39473 40861 -1
CDS - ZP_05417886.1 VCH_000229 hypothetical protein 41000 41488 -1
CDS - ZP_05417887.1 VCH_000230 hypothetical protein 41498 42046 -1
CDS - ZP_05417888.1 VCH_000231 putative methyltransferase associated with DUF414 42046 42684 -1
CDS - ZP_05417889.1 VCH_000232 cytochrome c4 42886 43503 -1
CDS - ZP_05417890.1 VCH_000233 GTP-binding protein EngB 43655 44317 1
CDS - ZP_05417891.1 VCH_000234 DNA polymerase I 45064 47868 -1
CDS - ZP_05417892.1 VCH_000235 hypothetical protein 48577 49005 -1
CDS - ZP_05417893.1 VCH_000236 porphobilinogen synthase 49112 50155 -1
CDS - ZP_05417894.1 VCH_000237 hypothetical protein 50142 50276 1
CDS - ZP_05417895.1 VCH_000238 putative deoxyribonuclease similar to YcfH type 2 50332 51099 1
CDS - ZP_05417896.1 VCH_000239 thiosulfate sulfurtransferase GlpE 51860 52180 1
CDS - ZP_05417897.1 VCH_000240 protein GlpG 52187 53020 1
CDS - ZP_05417898.1 VCH_000241 methyl-accepting chemotaxis protein 53395 55374 1
CDS - ZP_05417899.1 VCH_000242 flagellar biosynthesis protein FliL 55494 55904 -1
CDS - ZP_05417900.1 VCH_000243 chorismate--pyruvate lyase 56108 56647 1
CDS - ZP_05417901.1 VCH_000244 4-hydroxybenzoate polyprenyltransferase 56648 57502 1
CDS - ZP_05417902.1 VCH_000245 glycerol-3-phosphate acyltransferase 57578 59959 -1
CDS - ZP_05417903.1 VCH_000246 SOS-response repressor and protease LexA 60324 60953 1
CDS - ZP_05417904.1 VCH_000247 O-methyltransferase-related protein 61038 61850 1
CDS - ZP_05417905.1 VCH_000248 DNA-damage-inducible protein F 61930 63285 1
CDS - ZP_05417906.1 VCH_000249 cytochrome c551 peroxidase 63391 64392 -1
CDS - ZP_05417907.1 VCH_000250 twin-arginine translocation protein TatC 64704 65456 -1
CDS - ZP_05417908.1 VCH_000251 twin-arginine translocation protein TatB 65545 65946 -1
CDS - ZP_05417909.1 VCH_000252 twin-arginine translocation protein TatA 65950 66198 -1
CDS - ZP_05417910.1 VCH_000253 ubiquinone biosynthesis monooxygenase UbiB 66258 67892 -1
CDS - ZP_05417911.1 VCH_000254 hypothetical protein 67889 68512 -1
CDS - ZP_05417912.1 VCH_000255 ubiquinone/menaquinone biosynthesis methyltransferase UbiE/COQ5 68521 69303 -1
CDS - ZP_05417913.1 VCH_000256 DNA recombination protein RmuC 69348 70880 -1
CDS - ZP_05417914.1 VCH_000257 permease 71003 71914 1
CDS - ZP_05417915.1 VCH_000258 NAD(FAD)-utilizing dehydrogenase 71911 73098 -1
CDS - ZP_05417916.1 VCH_000259 universal stress protein B 73240 73563 -1
CDS - ZP_05417917.1 VCH_000260 ferritin-like protein 2 73639 74166 -1
CDS - ZP_05417918.1 VCH_000261 universal stress protein A 74331 74756 1
CDS - ZP_05417919.1 VCH_000262 putative acetate efflux pump MadN 74813 75700 1
CDS - ZP_05417920.1 VCH_000263 hypothetical protein 75796 76179 -1
CDS - ZP_05417921.1 VCH_000264 SAM-dependent methyltransferase 76303 77085 -1
CDS - ZP_05417922.1 VCH_000265 sensory box/GGDEF family protein 77148 79304 -1
CDS - ZP_05417923.1 VCH_000266 transcriptional regulator AsnC 79530 79991 1
CDS - ZP_05417924.1 VCH_000267 hypothetical protein 80080 80364 -1
CDS - ZP_05417925.1 VCH_000268 putative multidrug resistance protein 80468 81670 -1
CDS - ZP_05417926.1 VCH_000269 LysR-family transcriptional regulator 81775 82716 1
CDS - ZP_05417927.1 VCH_000270 Xaa-Pro aminopeptidase 82849 84642 1
CDS - ZP_05417928.1 VCH_000271 thiazole biosynthesis protein ThiH 84867 85979 -1
CDS - ZP_05417929.1 VCH_000272 thiazole biosynthesis protein ThiG 85976 86746 -1
CDS - ZP_05417930.1 VCH_000273 sulfur carrier protein adenylyltransferase ThiF 86952 87728 -1
CDS - ZP_05417931.1 VCH_000274 thiamin-phosphate pyrophosphorylase 87715 89037 -1
CDS - ZP_05417932.1 VCH_000275 thiamin biosynthesis protein ThiC 89041 90978 -1
CDS - ZP_05417933.1 VCH_000276 CrbC-like protein 91230 91610 -1
tRNA - - VCH_rna016 tRNA-Trp 91843 91919 -1
tRNA - - VCH_rna017 tRNA-Asp 91949 92025 -1
rRNA - - VCH_rna018 5S ribosomal RNA 92049 92168 -1
rRNA - - VCH_rna019 23S ribosomal RNA 92296 92479 -1