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Vibrio cholera CIRS 101, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05418064.1 VCH_000420 dihydropteroate synthase 1916 2731 1
CDS - ZP_05418065.1 VCH_000421 aminoglycoside 3'-phosphotransferase 2792 3595 1
CDS - ZP_05418066.1 VCH_000422 streptomycin phosphotransferase 3601 4431 1
CDS - ZP_05418067.1 VCH_000423 permease 5388 6602 -1
CDS - ZP_05418068.1 VCH_000424 type IV secretory pathway VirD2 components (relaxase) 6819 7703 -1
CDS - ZP_05418069.1 VCH_000425 transposase 7734 9227 -1
CDS - ZP_05418070.1 VCH_000426 transposase 9645 11783 -1
CDS - ZP_05418071.1 VCH_000427 error-prone repair protein UmuC 13606 14778 1
CDS - ZP_05418072.1 VCH_000428 hypothetical protein 14789 15214 -1
CDS - ZP_05418073.1 VCH_000429 hypothetical protein 15255 15389 -1
CDS - ZP_05418074.1 VCH_000430 Rod shape determination protein 15697 16671 1
CDS - ZP_05418075.1 VCH_000431 hypothetical protein 16770 16943 1
CDS - ZP_05418076.1 VCH_000432 integrase 16945 18186 1
CDS - ZP_05418077.1 VCH_000433 putative DNA mismatch repair protein 18316 20334 -1
CDS - ZP_05418078.1 VCH_000434 C-di-GMP phosphodiesterase A-related protein 21409 23466 1
CDS - ZP_05418079.1 VCH_000435 ribosomal-protein-S18p-alanine acetyltransferase 23455 23904 -1
CDS - ZP_05418080.1 VCH_000436 DNA polymerase III psi subunit 23901 24308 -1
CDS - ZP_05418081.1 VCH_000437 acetyltransferase 24419 24922 -1
CDS - ZP_05418082.1 VCH_000438 putative lipid carrier protein 24906 25325 -1
CDS - ZP_05418083.1 VCH_000439 C-di-GMP phosphodiesterase A-related protein 25666 27720 1
CDS - ZP_05418084.1 VCH_000440 putative protease 27855 28841 1
CDS - ZP_05418085.1 VCH_000441 putative protease 28853 29731 1
CDS - ZP_05418086.1 VCH_000442 multidrug resistance efflux pump 29784 31061 -1
CDS - ZP_05418087.1 VCH_000443 transcriptional regulator MarR family 31168 31575 -1
CDS - ZP_05418088.1 VCH_000444 lipoprotein nlpI precursor 31674 32486 -1
CDS - ZP_05418089.1 VCH_000445 polyribonucleotide nucleotidyltransferase 32701 34830 -1
CDS - ZP_05418090.1 VCH_000446 SSU ribosomal protein S15p (S13e) 35193 35462 -1
CDS - ZP_05418091.1 VCH_000447 tRNA pseudouridine synthase B 35604 36542 -1
CDS - ZP_05418092.1 VCH_000448 ribosome-binding factor A 36542 36940 -1
CDS - ZP_05418093.1 VCH_000449 translation initiation factor 2 37042 39738 -1
CDS - ZP_05418094.1 VCH_000450 transcription termination protein NusA 39763 41250 -1
CDS - ZP_05418095.1 VCH_000451 UPF0090 domain-containing protein 41269 41724 -1
tRNA - - VCH_rna027 tRNA-Met 41934 42010 -1
tRNA - - VCH_rna028 tRNA-Leu 42064 42147 -1
CDS - ZP_05418096.1 VCH_000452 preprotein translocase subunit SecG 42155 42490 -1
CDS - ZP_05418097.1 VCH_000453 phosphoglucosamine mutase 42747 44087 -1
CDS - ZP_05418098.1 VCH_000454 dihydropteroate synthase 44113 44949 -1
CDS - ZP_05418099.1 VCH_000455 cell division protein FtsH 45016 46962 -1
CDS - ZP_05418100.1 VCH_000456 cell division protein FtsJ/ribosomal RNA large subunit methyltransferase J 47072 47701 -1
CDS - ZP_05418101.1 VCH_000457 RNA binding protein 47821 48117 1
CDS - ZP_05418102.1 VCH_000458 transcription elongation factor GreA 48194 48667 -1
CDS - ZP_05418103.1 VCH_000459 outer membrane protein OmpU 49222 50247 1
CDS - ZP_05418104.1 VCH_000460 D-alanyl-D-alanine carboxypeptidase 50345 51790 1
CDS - ZP_05418105.1 VCH_000461 tyrosyl-tRNA synthetase 51858 53045 -1
CDS - ZP_05418106.1 VCH_000462 membrane protein 53176 54477 1
CDS - ZP_05418107.1 VCH_000463 putative multidrug resistance protein 54559 57678 -1
CDS - ZP_05418108.1 VCH_000464 membrane-fusion protein 57689 58789 -1
CDS - ZP_05418109.1 VCH_000465 probable iron binding protein from the HesB_IscA_SufA family 58887 59228 -1
CDS - ZP_05418110.1 VCH_000466 glutamate-1-semialdehyde aminotransferase 59512 60810 1
CDS - ZP_05418111.1 VCH_000467 predicted permease 61064 62149 1
CDS - ZP_05418112.1 VCH_000468 ribosomal RNA small subunit methyltransferase C 62222 63244 1
CDS - ZP_05418113.1 VCH_000469 chitin catabolic cascade sensor histidine kinase ChiS 63452 66841 1
CDS - ZP_05418114.1 VCH_000470 (GlcNAc)2 ABC transporter: substrate-binding protein 67752 69422 1
CDS - ZP_05418115.1 VCH_000471 (GlcNAc)2 ABC transporter permease component 1 69592 70578 1
CDS - ZP_05418116.1 VCH_000472 (GlcNAc)2 ABC transporter permease component 2 70581 71606 1
CDS - ZP_05418117.1 VCH_000473 (GlcNAc)2 ABC transporter ATP-binding component 1 71645 72592 1
CDS - ZP_05418118.1 VCH_000474 (GlcNAc)2 ABC transporter ATP-binding component 2 72635 73630 1
CDS - ZP_05418119.1 VCH_000475 glucosamine-link cellobiase 73687 75411 1
CDS - ZP_05418120.1 VCH_000476 glucosamine kinase GpsK 75408 76292 1
CDS - ZP_05418121.1 VCH_000477 beta-hexosaminidase 76289 78202 1
CDS - ZP_05418122.1 VCH_000478 chitobiose phosphorylase 78321 80726 1
CDS - ZP_05418123.1 VCH_000479 GlcNAc phosphomutase 80849 82261 1
CDS - ZP_05418124.1 VCH_000480 ferric iron ABC transporter ATP-binding protein 82392 83423 -1
CDS - ZP_05418125.1 VCH_000481 iron(III) ABC transporter permease protein 83423 85009 -1
CDS - ZP_05418126.1 VCH_000482 ferric iron ABC transporter iron-binding protein 85132 86145 -1
CDS - ZP_05418127.1 VCH_000483 ammonium transporter 86287 87516 -1
CDS - ZP_05418128.1 VCH_000484 nitrogen regulatory protein P-II 87538 87876 -1
CDS - ZP_05418129.1 VCH_000485 hypothetical protein 88054 88434 -1
CDS - ZP_05418130.1 VCH_000486 aconitate hydratase 2 88589 91186 -1
CDS - ZP_05418131.1 VCH_000487 hypothetical protein 91451 93742 -1
CDS - ZP_05418132.1 VCH_000488 multimodular transpeptidase-transglycosylase 93982 96315 -1
CDS - ZP_05418133.1 VCH_000489 ATP-dependent helicase HrpB 96312 98774 -1
CDS - ZP_05418134.1 VCH_000490 hydrolase 98873 100198 -1
CDS - ZP_05418135.1 VCH_000491 sugar/maltose fermentation stimulation protein 100472 101206 1
CDS - ZP_05418136.1 VCH_000492 C4-type zinc finger protein, DksA/TraR family 101331 101777 1
CDS - ZP_05418137.1 VCH_000493 glutamyl-Q-tRNA synthetase 101851 102741 1
CDS - ZP_05418138.1 VCH_000494 poly(A) polymerase 102832 104205 1
CDS - ZP_05418139.1 VCH_000495 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 104202 104630 1
CDS - ZP_05418140.1 VCH_000496 3-methyl-2-oxobutanoate hydroxymethyltransferase 104709 105503 1
CDS - ZP_05418141.1 VCH_000497 pantoate--beta-alanine ligase 105514 106395 1
CDS - ZP_05418142.1 VCH_000498 ABC-type multidrug transport system permease component 106459 107229 -1
CDS - ZP_05418143.1 VCH_000499 ABC-type multidrug transport system ATPase component 107235 108152 -1
CDS - ZP_05418144.1 VCH_000500 sulfate permease family protein 108536 110182 -1
CDS - ZP_05418145.1 VCH_000501 carbonic anhydrase 110330 110998 1
CDS - ZP_05418146.1 VCH_000502 hypoxanthine-guanine phosphoribosyltransferase 111073 111606 -1
CDS - ZP_05418147.1 VCH_000503 quorum-sensing regulator of virulence HapR 111863 112513 1
CDS - ZP_05418148.1 VCH_000504 tetrapyrrole (Corrin-Porphyrin) methylase family protein 112727 113593 -1
CDS - ZP_05418149.1 VCH_000505 LppC putative lipoprotein 113663 115468 1
CDS - ZP_05418150.1 VCH_000506 endonuclease 115500 115823 1
CDS - ZP_05418151.1 VCH_000507 phosphoheptose isomerase 115827 116417 1
CDS - ZP_05418152.1 VCH_000508 hemolysin precursor 116420 116989 1
CDS - ZP_05418153.1 VCH_000509 stringent starvation protein B 117057 117521 -1
CDS - ZP_05418154.1 VCH_000510 stringent starvation protein A 117533 118168 -1
CDS - ZP_05418155.1 VCH_000511 ubiquinol cytochrome C oxidoreductase cytochrome C1 subunit 118268 119005 -1
CDS - ZP_05418156.1 VCH_000512 ubiquinol--cytochrome c reductase cytochrome B subunit 119002 120267 -1
CDS - ZP_05418157.1 VCH_000513 ubiquinol-cytochrome C reductase iron-sulfur subunit 120267 120860 -1
CDS - ZP_05418158.1 VCH_000514 SSU ribosomal protein S9p (S16e) 121188 121580 -1
CDS - ZP_05418159.1 VCH_000515 LSU ribosomal protein L13p (L13Ae) 121596 122024 -1
CDS - ZP_05418160.1 VCH_000516 predicted ATPase 122248 123351 -1
CDS - ZP_05418161.1 VCH_000517 putative membrane protein 123506 123943 1