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Vibrio cholera CIRS 101, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - VCH_rna043 23S ribosomal RNA 1 1942 1
rRNA - - VCH_rna044 5S ribosomal RNA 2070 2189 1
tRNA - - VCH_rna045 tRNA-Asp 2263 2339 1
CDS - ZP_05418477.1 VCH_000844 hypothetical protein 2533 2856 1
CDS - ZP_05418478.1 VCH_000845 NADPH-flavin oxidoreductase 2866 3588 1
CDS - ZP_05418479.1 VCH_000846 ferredoxin 3623 3877 -1
CDS - ZP_05418480.1 VCH_000847 putative protease 3880 5280 -1
CDS - ZP_05418481.1 VCH_000848 DNA recombination-dependent growth factor C 5431 6345 -1
CDS - ZP_05418482.1 VCH_000849 phosphate regulon transcriptional regulatory protein PhoB 6582 7271 1
CDS - ZP_05418483.1 VCH_000850 phosphate regulon sensor protein phoR 7293 8594 1
CDS - ZP_05418484.1 VCH_000851 phosphate ABC transporter, periplasmic phosphate-binding protein PstS 8600 9568 1
CDS - ZP_05418485.1 VCH_000852 exopolyphosphatase 9636 11138 -1
CDS - ZP_05418486.1 VCH_000853 polyphosphate kinase 11119 13224 -1
CDS - ZP_05418487.1 VCH_000854 phosphate transport system permease protein PstC 13423 15618 1
CDS - ZP_05418488.1 VCH_000855 phosphate transport system permease protein PstA 15628 17274 1
CDS - ZP_05418489.1 VCH_000856 phosphate transport ATP-binding protein PstB 17277 18098 1
CDS - ZP_05418490.1 VCH_000857 phosphate transport system regulatory protein PhoU 18132 18842 1
CDS - ZP_05418491.1 VCH_000858 hypothetical protein 18903 19679 -1
CDS - ZP_05418492.1 VCH_000859 cytoplasmic copper homeostasis protein CutC 19882 20646 -1
CDS - ZP_05418493.1 VCH_000860 alkyl hydroperoxide reductase subunit C-like protein 20981 21586 -1
CDS - ZP_05418494.1 VCH_000861 transcriptional regulator LysR family 21808 22713 1
CDS - ZP_05418495.1 VCH_000862 malate synthase 23297 24934 1
CDS - ZP_05418496.1 VCH_000863 isocitrate lyase 25064 26377 1
CDS - ZP_05418497.1 VCH_000864 putative acetoin utilization protein AcuB 26530 26979 -1
CDS - ZP_05418498.1 VCH_000865 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 27269 28327 1
CDS - ZP_05418499.1 VCH_000866 tRNA-guanine transglycosylase 28556 29695 1
CDS - ZP_05418500.1 VCH_000867 preprotein translocase subunit YajC 29800 30132 1
CDS - ZP_05418501.1 VCH_000868 protein-export membrane protein SecD 30187 32007 1
CDS - ZP_05418502.1 VCH_000869 protein-export membrane protein SecF 32022 32969 1
CDS - ZP_05418503.1 VCH_000870 myo-inositol-1(or 4)-monophosphatase 33137 33940 -1
CDS - ZP_05418504.1 VCH_000871 tRNA:Cm32/Um32 methyltransferase 34119 34853 1
CDS - ZP_05418505.1 VCH_000872 iron-sulfur cluster regulator IscR 34923 35489 1
CDS - ZP_05418506.1 VCH_000873 cysteine desulfurase 35516 36730 1
CDS - ZP_05418507.1 VCH_000874 iron-sulfur cluster assembly scaffold protein IscU 36767 37150 1
CDS - ZP_05418508.1 VCH_000876 chaperone protein HscB 37584 38099 1
CDS - ZP_05418509.1 VCH_000877 chaperone protein HscA 38123 39973 1
CDS - ZP_05418510.1 VCH_000878 ferredoxin 2Fe-2S 39987 40325 1
CDS - ZP_05418511.1 VCH_000879 hypothetical protein 40374 40568 1
CDS - ZP_05418512.1 VCH_000880 peptidase B 40788 42077 1
CDS - ZP_05418513.1 VCH_000881 nucleoside diphosphate kinase 42282 42710 1
CDS - ZP_05418514.1 VCH_000882 ribosomal RNA large subunit methyltransferase N 42884 44005 1
CDS - ZP_05418515.1 VCH_000883 hypothetical protein 44319 45401 1
CDS - ZP_05418516.1 VCH_000884 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 45412 46536 1
CDS - ZP_05418517.1 VCH_000885 histidyl-tRNA synthetase 46562 47830 1
CDS - ZP_05418518.1 VCH_000886 membrane protein 47867 48481 1
CDS - ZP_05418519.1 VCH_000887 YfgL protein 48494 49654 1
CDS - ZP_05418520.1 VCH_000888 GTP-binding protein EngA 49847 51331 1
CDS - ZP_05418521.1 VCH_000889 predicted metal-dependent hydrolase 51385 52269 1
CDS - ZP_05418522.1 VCH_000890 hypothetical protein 52574 52807 1
CDS - ZP_05418523.1 VCH_000891 exodeoxyribonuclease VII large subunit 52788 54128 -1
CDS - ZP_05418524.1 VCH_000892 inosine-5'-monophosphate dehydrogenase 54336 55799 1
CDS - ZP_05418525.1 VCH_000893 GMP synthase [glutamine-hydrolyzing] 55906 57459 1
CDS - ZP_05418526.1 VCH_000894 chitinase 57716 59419 1
CDS - ZP_05418527.1 VCH_000895 hypothetical protein 59610 60203 1
CDS - ZP_05418528.1 VCH_000896 isochorismatase of siderophore biosynthesis 60515 61396 1
CDS - ZP_05418529.1 VCH_000897 2,3-dihydroxybenzoate-AMP ligase 61497 63128 -1
CDS - ZP_05418530.1 VCH_000898 isochorismate synthase of siderophore biosynthesis 63139 64326 -1
CDS - ZP_05418531.1 VCH_000899 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 64563 65282 1
CDS - ZP_05418532.1 VCH_000900 amide synthase component of siderophore synthetase 65294 66604 -1
CDS - ZP_05418533.1 VCH_000901 ferric vibriobactin enterobactin transport system substrate-binding protein ViuP 66806 67765 1
CDS - ZP_05418534.1 VCH_000902 ferric vibriobactin enterobactin transport system permease protein ViuD 67816 68814 1
CDS - ZP_05418535.1 VCH_000903 ferric vibriobactin enterobactin transport system permease protein ViuG 68793 69869 1
CDS - ZP_05418536.1 VCH_000904 ferric vibriobactin enterobactin transport system ATP-binding protein ViuC 70088 70825 1
CDS - ZP_05418537.1 VCH_000905 phosphopantetheinyl transferase component of siderophore synthetase 70828 71541 1
CDS - ZP_05418538.1 VCH_000906 transcriptional regulator near Vibriobactin biosynthetic gene custer 71557 72477 1
CDS - ZP_05418539.1 VCH_000907 alkyl sulfatase 72695 74677 1
CDS - ZP_05418540.1 VCH_000908 sodium/alanine symporter 74757 76307 -1
CDS - ZP_05418541.1 VCH_000909 D-amino acid dehydrogenase small subunit 76685 77947 -1
CDS - ZP_05418542.1 VCH_000910 transcriptional regulator LysR family 78051 78983 1
CDS - ZP_05418543.1 VCH_000911 aromatic ring-cleaving dioxygenase 79108 79437 1
CDS - ZP_05418544.1 VCH_000912 hypothetical protein 79603 79875 1
CDS - ZP_05418545.1 VCH_000913 transcriptional regulatory protein CitB 79909 80592 -1
CDS - ZP_05418546.1 VCH_000914 sensor kinase CitA 80606 82216 -1
CDS - ZP_05418547.1 VCH_000915 oxaloacetate decarboxylase beta chain 82374 83675 -1
CDS - ZP_05418548.1 VCH_000916 oxaloacetate decarboxylase alpha chain 83691 85490 -1
CDS - ZP_05418549.1 VCH_000917 oxaloacetate decarboxylase gamma chain 85509 85883 -1
CDS - ZP_05418550.1 VCH_000918 Na(+)Citrate OH(-) antiporter 85876 87222 -1
CDS - ZP_05418551.1 VCH_000919 [Citrate [pro-3S]-lyase] ligase 87499 88554 1
CDS - ZP_05418552.1 VCH_000920 citrate lyase gamma chain acyl carrier protein 88606 88902 1
CDS - ZP_05418553.1 VCH_000921 citrate lyase beta chain 88899 89774 1
CDS - ZP_05418554.1 VCH_000922 citrate lyase alpha chain 89785 91314 1
CDS - ZP_05418555.1 VCH_000923 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 91311 91847 1
CDS - ZP_05418556.1 VCH_000924 triphosphoribosyl-dephospho-CoA synthetase 91825 92766 1
CDS - ZP_05418557.1 VCH_000925 hypothetical protein 93113 93511 1
CDS - ZP_05418558.1 VCH_000926 RNA methyltransferase TrmH family 93625 94359 1
CDS - ZP_05418559.1 VCH_000927 ferredoxin 94538 94765 -1
CDS - ZP_05418560.1 VCH_000928 NAD(FAD)-utilizing dehydrogenase 95108 96724 1
CDS - ZP_05418561.1 VCH_000929 hypothetical protein 96792 97475 -1
CDS - ZP_05418562.1 VCH_000930 hypothetical protein 97698 99377 1
CDS - ZP_05418563.1 VCH_000931 hypothetical protein 100418 101122 -1
CDS - ZP_05418564.1 VCH_000932 helicase-related protein 101192 104128 -1
CDS - ZP_05418565.1 VCH_000933 tellurite resistance protein-related protein 104132 104710 -1
CDS - ZP_05418566.1 VCH_000934 predicted transcriptional regulator 105138 105605 -1
CDS - ZP_05418567.1 VCH_000935 hypothetical protein 105602 106963 -1
CDS - ZP_05418568.1 VCH_000936 transposase 107567 108544 1
CDS - ZP_05418569.1 VCH_000937 transposase 108570 108710 -1
CDS - ZP_05418570.1 VCH_000938 transposase 109032 109250 -1
CDS - ZP_05418571.1 VCH_000939 aldehyde dehydrogenase 109592 111112 -1
CDS - ZP_05418572.1 VCH_000940 ToxR-activated gene A protein 111328 114333 1
CDS - ZP_05418573.1 VCH_000941 beta/gamma crystallin domain-containing protein 114446 119047 1