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Vibrio cholera CIRS 101, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05418749.1 VCH_001125 hypothetical protein 89 226 -1
CDS - ZP_05418750.1 VCH_001126 DNA repair protein RadC 223 699 -1
CDS - ZP_05418751.1 VCH_001127 predicted transcriptional regulator 843 1019 1
CDS - ZP_05418752.1 VCH_001128 sialidase 1166 3511 -1
CDS - ZP_05418753.1 VCH_001129 N-acetylglucosamine-6-phosphate deacetylase 3935 5071 -1
CDS - ZP_05418754.1 VCH_001130 N-acetylmannosamine kinase 5075 5938 -1
CDS - ZP_05418755.1 VCH_001131 N-acetylmannosamine-6-phosphate 2-epimerase 5926 6636 -1
CDS - ZP_05418756.1 VCH_001132 TRAP-type transport system periplasmic component 6863 7828 1
CDS - ZP_05418757.1 VCH_001133 TRAP-type transport system small permease component 7891 8400 1
CDS - ZP_05418758.1 VCH_001134 TRAP-type transport system large permease component 8408 9691 1
CDS - ZP_05418759.1 VCH_001135 N-acetylneuraminate lyase 9729 10625 1
CDS - ZP_05418760.1 VCH_001136 sialic acid utilization regulator RpiR family 10754 11590 1
CDS - ZP_05418761.1 VCH_001137 sialic acid-induced transmembrane protein YjhT(NanM) possible mutarotase 11772 12926 1
CDS - ZP_05418762.1 VCH_001138 sialic acid-induced transmembrane protein YjhT(NanM) possible mutarotase 12941 14011 1
CDS - ZP_05418763.1 VCH_001139 hypothetical protein 14076 14936 -1
CDS - ZP_05418764.1 VCH_001140 hypothetical protein 15009 18626 1
CDS - ZP_05418765.1 VCH_001141 hypothetical protein 18608 20671 1
CDS - ZP_05418766.1 VCH_001142 type I restriction-modification system DNA-methyltransferase subunit M 20812 23193 1
CDS - ZP_05418767.1 VCH_001143 hypothetical protein 23210 24538 1
CDS - ZP_05418768.1 VCH_001144 hypothetical protein 24539 25951 1
CDS - ZP_05418769.1 VCH_001145 hypothetical protein 25944 27935 1
CDS - ZP_05418770.1 VCH_001146 type I restriction-modification system restriction subunit R 27972 31031 1
CDS - ZP_05418771.1 VCH_001147 putative membrane protein 31076 33196 1
CDS - ZP_05418772.1 VCH_001148 chemotaxis protein MotB-related protein 33189 33923 1
CDS - ZP_05418773.1 VCH_001149 hypothetical protein 33920 35371 1
CDS - ZP_05418774.1 VCH_001150 helicase putative 35362 38811 1
CDS - ZP_05418775.1 VCH_001151 phage integrase 38942 39397 -1
CDS - ZP_05418776.1 VCH_001152 phage integrase 39493 40728 -1
tRNA - - VCH_rna050 tRNA-Ser 41041 41128 -1
CDS - ZP_05418777.1 VCH_001153 transporter AcrB/D/F family 41340 44390 -1
CDS - ZP_05418778.1 VCH_001154 probable Co/Zn/Cd efflux system membrane fusion protein 44390 45484 -1
CDS - ZP_05418779.1 VCH_001155 putative lipoprotein 45700 46278 -1
CDS - ZP_05418780.1 VCH_001156 paraquat-inducible protein B 46275 47903 -1
CDS - ZP_05418781.1 VCH_001157 paraquat-inducible protein A 47915 49213 -1
CDS - ZP_05418782.1 VCH_001158 small-conductance mechanosensitive channel 49441 51150 1
CDS - ZP_05418783.1 VCH_001159 hypothetical protein 51166 52287 -1
CDS - ZP_05418784.1 VCH_001160 membrane protein 52298 53410 -1
CDS - ZP_05418785.1 VCH_001161 hypothetical protein 53424 54248 -1
CDS - ZP_05418786.1 VCH_001162 transcriptional regulator TetR family 54475 55104 1
CDS - ZP_05418787.1 VCH_001163 succinate-semialdehyde dehydrogenase [NADP+] 55137 56588 1
CDS - ZP_05418788.1 VCH_001164 hypothetical protein 56569 56850 -1
CDS - ZP_05418789.1 VCH_001165 1-aminocyclopropane-1-carboxylate deaminase 56895 57806 -1
CDS - ZP_05418790.1 VCH_001166 predicted transcriptional regulator for fatty acid degradation FadQ TetR family 58372 58965 1
CDS - ZP_05418791.1 VCH_001167 acyl-CoA dehydrogenase short-chain specific 59066 61303 1
CDS - ZP_05418792.1 VCH_001168 short-chain alcohol dehydrogenase family 61502 62707 1
CDS - ZP_05418793.1 VCH_001169 translation initiation factor 1 63011 63229 -1
CDS - ZP_05418794.1 VCH_001170 leucyl/phenylalanyl-tRNA--protein transferase 63313 64014 -1
CDS - ZP_05418795.1 VCH_001171 leucyl/phenylalanyl-tRNA--protein transferase 64018 64749 -1
CDS - ZP_05418796.1 VCH_001172 5-Enolpyruvylshikimate-3-phosphate synthase 65016 66296 1
CDS - ZP_05418797.1 VCH_001173 protein YciN 66387 66635 -1
CDS - ZP_05418798.1 VCH_001174 DNA topoisomerase I 66972 69602 1
CDS - ZP_05418799.1 VCH_001175 hypothetical protein 70005 70139 -1
CDS - ZP_05418800.1 VCH_001176 glucose-1-phosphate adenylyltransferase 70271 71488 1
CDS - ZP_05418801.1 VCH_001177 glycogen synthase ADP-glucose transglucosylase 71490 72944 1
CDS - ZP_05418802.1 VCH_001178 menaquinone biosynthesis related protein putative DHNA-CoA thioesterase 73132 73950 1
CDS - ZP_05418803.1 VCH_001179 hypothetical protein 73955 74266 -1
CDS - ZP_05418804.1 VCH_001180 dihydrolipoamide dehydrogenase 74300 74989 -1
CDS - ZP_05418805.1 VCH_001181 DNA transformation protein TfoX 75344 75904 -1
CDS - ZP_05418806.1 VCH_001182 purine nucleotide synthesis repressor 76290 77300 -1
CDS - ZP_05418807.1 VCH_001183 chaperone protein TorD 77707 78369 -1
CDS - ZP_05418808.1 VCH_001184 TorCAD operon transcriptional regulatory protein TorR 78594 79298 1
CDS - ZP_05418809.1 VCH_001185 membrane protein functionally coupled to the MukBEF chromosome partitioning mechanism 79398 80219 -1
CDS - ZP_05418810.1 VCH_001186 S-adenosylmethionine-dependent methyltransferase functionally coupled to the MukBEF chromosome partitioning mechanism 80336 81118 1
CDS - ZP_05418811.1 VCH_001187 chromosome partition protein MukF 81130 82467 1
CDS - ZP_05418812.1 VCH_001188 chromosome partition protein MukE 82448 83170 1
CDS - ZP_05418813.1 VCH_001189 chromosome partition protein MukB 83167 87642 1
CDS - ZP_05418814.1 VCH_001190 transcriptional regulator AsnC family 87724 88167 -1
CDS - ZP_05418815.1 VCH_001191 putative threonine efflux protein 88275 88859 1
CDS - ZP_05418816.1 VCH_001192 hypothetical protein 88907 91276 -1
CDS - ZP_05418817.1 VCH_001194 hypothetical protein 94147 96915 -1
CDS - ZP_05418818.1 VCH_001195 hypothetical protein 97139 97825 1
CDS - ZP_05418819.1 VCH_001196 hypothetical protein 97942 98142 1
CDS - ZP_05418820.1 VCH_001197 transcriptional activator MetR 98149 99066 -1
CDS - ZP_05418821.1 VCH_001198 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 99462 101747 1
CDS - ZP_05418822.1 VCH_001199 hypothetical protein 102022 102420 -1
CDS - ZP_05418823.1 VCH_001200 hypothetical protein 102422 102718 -1
CDS - ZP_05418824.1 VCH_001201 acyl-CoA hydrolase 102793 103212 -1
CDS - ZP_05418825.1 VCH_001202 intracellular septation protein A 103371 103916 -1
CDS - ZP_05418826.1 VCH_001203 phage protein 104149 104373 -1
CDS - ZP_05418827.1 VCH_001204 hypothetical protein 104551 105198 -1
CDS - ZP_05418828.1 VCH_001205 nucleoside-diphosphate-sugar epimerase 105191 106021 -1
CDS - ZP_05418829.1 VCH_001206 DNA-binding protein inhibitor Id-2-related protein 106125 106358 -1
CDS - ZP_05418830.1 VCH_001207 formate efflux transporter 106749 107552 1
CDS - ZP_05418831.1 VCH_001208 periplasmic nitrate reductase component NapE 108232 108414 1
CDS - ZP_05418832.1 VCH_001209 cytochrome c-type protein TorY 108587 109645 1
CDS - ZP_05418833.1 VCH_001210 trimethylamine-N-oxide reductase 109669 112131 1
CDS - ZP_05418834.1 VCH_001213 predicted manganese transporter 11 TMS 114138 115322 -1
CDS - ZP_05418835.1 VCH_001214 manganese-dependent inorganic pyrophosphatase 115532 116437 1
CDS - ZP_05418836.1 VCH_001215 hypothetical protein 116572 116961 1
CDS - ZP_05418837.1 VCH_001216 hypothetical protein 116998 117768 -1
CDS - ZP_05418838.1 VCH_001217 peptide transport system ATP-binding protein SapF 117769 118557 -1
CDS - ZP_05418839.1 VCH_001218 peptide transport system ATP-binding protein SapD 118554 119549 -1
CDS - ZP_05418840.1 VCH_001219 peptide transport system permease protein SapC 119549 120436 -1
CDS - ZP_05418841.1 VCH_001220 peptide transport system permease protein SapB 120423 121385 -1
CDS - ZP_05418842.1 VCH_001221 peptide transport periplasmic protein SapA 121385 122968 -1
CDS - ZP_05418843.1 VCH_001222 Psp operon transcriptional activator 123121 124137 -1
CDS - ZP_05418844.1 VCH_001223 phage shock protein A 124347 125015 1
CDS - ZP_05418845.1 VCH_001224 phage shock protein B 125029 125262 1
CDS - ZP_05418846.1 VCH_001225 phage shock protein C 125255 125644 1
CDS - ZP_05418847.1 VCH_001226 probable Co/Zn/Cd efflux system membrane fusion protein 125816 126847 1