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Vibrio cholera CIRS 101, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - VCH_rna070 16S ribosomal RNA 1 923 -1
CDS - ZP_05420707.1 VCH_003155 hypothetical protein 1109 1249 -1
CDS - ZP_05420708.1 VCH_003157 hypothetical protein 1971 2246 -1
CDS - ZP_05420709.1 VCH_003158 shikimate 5-dehydrogenase I alpha 2243 3079 -1
CDS - ZP_05420710.1 VCH_003159 coproporphyrinogen III oxidase aerobic 3141 4058 -1
CDS - ZP_05420711.1 VCH_003160 YrdC family protein 4077 4634 -1
CDS - ZP_05420712.1 VCH_003161 phosphoribosylaminoimidazole carboxylase catalytic subunit 4801 5286 1
CDS - ZP_05420713.1 VCH_003162 phosphoribosylaminoimidazole carboxylase ATPase subunit 5290 6423 1
CDS - ZP_05420714.1 VCH_003163 Zn-finger domain-containing protein 6496 7062 -1
CDS - ZP_05420715.1 VCH_003164 hypothetical protein 7078 7554 -1
CDS - ZP_05420716.1 VCH_003165 rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake 7557 8672 -1
CDS - ZP_05420717.1 VCH_003166 LysM domain-containing protein 8672 9799 -1
CDS - ZP_05420718.1 VCH_003167 peptide deformylase 9939 10448 1
CDS - ZP_05420719.1 VCH_003168 methionyl-tRNA formyltransferase 10466 11413 1
CDS - ZP_05420720.1 VCH_003169 ribosomal RNA small subunit methyltransferase B 11469 12749 1
CDS - ZP_05420721.1 VCH_003170 Trk system potassium uptake protein TrkA 12811 14187 1
CDS - ZP_05420722.1 VCH_003171 potassium uptake protein TrkH 14199 15644 1
CDS - ZP_05420723.1 VCH_003172 hypothetical protein 15656 16213 1
CDS - ZP_05420724.1 VCH_003173 hypothetical protein 16252 16893 -1
CDS - ZP_05420725.1 VCH_003174 hypothetical Transcriptional Regulator 16977 17768 -1
CDS - ZP_05420726.1 VCH_003175 hypothetical protein 18098 18220 1
CDS - ZP_05420727.1 VCH_003176 protein YihD 18329 18595 1
CDS - ZP_05420728.1 VCH_003177 type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation 19012 20436 1
CDS - ZP_05420729.1 VCH_003178 YihE protein required for LPS synthesis 20484 21470 1
CDS - ZP_05420730.1 VCH_003179 periplasmic thiol:disulfide interchange protein DsbA 21501 22103 1
CDS - ZP_05420731.1 VCH_003180 1-acyl-sn-glycerol-3-phosphate acyltransferase 22181 23065 -1
CDS - ZP_05420732.1 VCH_003181 Mg(2+) chelatase family protein/ComM-related protein 23155 24678 -1
CDS - ZP_05420733.1 VCH_003182 acetolactate synthase large subunit 25212 26858 1
CDS - ZP_05420734.1 VCH_003183 acetolactate synthase small subunit 26870 27154 1
CDS - ZP_05420735.1 VCH_003184 branched-chain amino acid aminotransferase 27166 28104 1
CDS - ZP_05420736.1 VCH_003185 dihydroxy-acid dehydratase 28114 29955 1
CDS - ZP_05420737.1 VCH_003186 threonine dehydratase biosynthetic 29959 31491 1
CDS - ZP_05420738.1 VCH_003187 alcohol dehydrogenase 31739 32719 1
CDS - ZP_05420739.1 VCH_003188 hypothetical protein 32891 33076 -1
CDS - ZP_05420740.1 VCH_003189 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA 33212 33460 1
CDS - ZP_05420741.1 VCH_003190 NADH dehydrogenase subunit II-related protein 33547 33804 -1
CDS - ZP_05420742.1 VCH_003191 hypothetical protein 33910 34464 -1
CDS - ZP_05420743.1 VCH_003192 glycyl-tRNA synthetase alpha chain 34880 35797 1
CDS - ZP_05420744.1 VCH_003193 glycyl-tRNA synthetase beta chain 35812 37878 1
CDS - ZP_05420745.1 VCH_003194 valine--pyruvate aminotransferase 38197 39453 1
CDS - ZP_05420746.1 VCH_003195 heat shock protein A 39541 39978 -1
CDS - ZP_05420747.1 VCH_003196 hypothetical protein 40254 40370 -1
CDS - ZP_05420748.1 VCH_003197 hypothetical protein 40380 40802 -1
CDS - ZP_05420749.1 VCH_003198 DNA gyrase subunit B 41227 43644 -1
CDS - ZP_05420750.1 VCH_003199 DNA recombination and repair protein RecF 43665 44738 -1
CDS - ZP_05420751.1 VCH_003203 chromosomal replication initiator protein dnaA 45934 47310 -1
CDS - ZP_05420752.1 VCH_003204 hypothetical protein 47397 47516 -1
CDS - ZP_05420753.1 VCH_003205 amino acid ABC transporter amino acid-binding portion 47649 48395 1
CDS - ZP_05420754.1 VCH_003206 amino acid ABC transporter permease protein 48473 49144 1
CDS - ZP_05420755.1 VCH_003207 ABC-type polar amino acid transport system ATPase component 49141 49878 1
CDS - ZP_05420756.1 VCH_003208 LSU ribosomal protein L34p 50120 50257 1
CDS - ZP_05420757.1 VCH_003209 ribonuclease P protein component 50303 50626 1
CDS - ZP_05420758.1 VCH_003210 OxaI/YidC membrane insertion protein 50853 52478 1
CDS - ZP_05420759.1 VCH_003211 GTPase and tRNA-U34 5-formylation enzyme TrmE 52572 53933 1
CDS - ZP_05420760.1 VCH_003212 flavoprotein MioC 53943 54377 1
CDS - ZP_05420761.1 VCH_003213 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 54852 56747 1
CDS - ZP_05420762.1 VCH_003214 ribosomal RNA small subunit methyltransferase G 56747 57379 1
CDS - ZP_05420763.1 VCH_003215 ATPase involved in chromosome partitioning 57394 58167 1
CDS - ZP_05420764.1 VCH_003216 chromosome (plasmid) partitioning protein ParB/stage 0 sporulation protein J 58194 59075 1
CDS - ZP_05420765.1 VCH_003217 ATP synthase protein I 59265 59654 1
CDS - ZP_05420766.1 VCH_003218 ATP synthase A chain 59663 60475 1
CDS - ZP_05420767.1 VCH_003219 ATP synthase C chain 60519 60776 1
CDS - ZP_05420768.1 VCH_003220 ATP synthase B chain 60856 61320 1
CDS - ZP_05420769.1 VCH_003221 ATP synthase delta chain 61335 61868 1
CDS - ZP_05420770.1 VCH_003222 ATP synthase alpha chain 61882 63423 1
CDS - ZP_05420771.1 VCH_003223 ATP synthase gamma chain 63468 64334 1
CDS - ZP_05420772.1 VCH_003224 ATP synthase beta chain 64369 65772 1
CDS - ZP_05420773.1 VCH_003225 ATP synthase epsilon chain 65791 66213 1
CDS - ZP_05420774.1 VCH_003226 N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate N-acetyltransferase 66460 67821 1
CDS - ZP_05420775.1 VCH_003227 multidrug resistance protein 67883 69085 -1
CDS - ZP_05420776.1 VCH_003228 hypothetical protein 69244 70149 1
CDS - ZP_05420777.1 VCH_003229 3-ketoacyl-CoA thiolase 70216 71379 -1
CDS - ZP_05420778.1 VCH_003230 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase 71405 73576 -1
CDS - ZP_05420779.1 VCH_003231 hypothetical protein 73787 74419 1
CDS - ZP_05420780.1 VCH_003232 potassium uptake protein TrkH 74439 75896 1
CDS - ZP_05420781.1 VCH_003233 protoporphyrinogen IX oxidase oxygen-independent HemG 75919 76443 1
CDS - ZP_05420782.1 VCH_003234 hypothetical protein 76591 76731 1
rRNA - - VCH_rna071 16S ribosomal RNA 76897 77027 1