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Vibrio cholerae 2740-80, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_01675461.1 VC274080_0843 lipoprotein YfgL 1 318 1
CDS - ZP_01675462.1 VC274080_0844 GTP-binding protein 511 1995 1
CDS - ZP_01675547.1 VC274080_0845 hypothetical protein 2016 2933 1
CDS - ZP_01675497.1 VC274080_0847 conserved hypothetical protein 3238 3471 1
CDS xseA ZP_01675527.1 VC274080_0846 exodeoxyribonuclease VII, large subunit 3452 4792 -1
CDS guaB ZP_01675564.1 VC274080_0848 inosine-5`-monophosphate dehydrogenase 4994 6463 1
CDS guaA ZP_01675558.1 VC274080_0849 GMP synthase 6570 8123 1
CDS - ZP_01675518.1 VC274080_0850 chitinase, putative 8359 10083 1
CDS - ZP_01675470.1 VC274080_0851 conserved hypothetical protein 10274 10867 1
CDS vibB ZP_01675556.1 VC274080_0852 vibriobactin-specific isochorismatase 11179 12060 1
CDS vibE ZP_01675548.1 VC274080_0853 vibriobactin-specific 2,3-dihydroxybenzoate-AMP ligase 12161 13792 -1
CDS vibC ZP_01675521.1 VC274080_0854 vibriobactin-specific isochorismate synthase 13803 14990 -1
CDS - ZP_01675481.1 VC274080_0855 hypothetical protein 15158 15946 1
CDS vibH ZP_01675452.1 VC274080_0856 vibriobactin synthetase, amide synthase subunit VibH 15958 17274 -1
CDS viuP ZP_01675535.1 VC274080_0857 vibriobactin and enterobactin ABC transporter, periplasmic ferric vibriobactin/enterobactin-binding protein 17452 18429 1
CDS viuD ZP_01675545.1 VC274080_0858 vibriobactin and enterobactin ABC transporter, permease protein 18426 19478 1
CDS viuG ZP_01675472.1 VC274080_0859 vibriobactin and enterobactin ABC transporter, permease protein 19457 20533 1
CDS viuC ZP_01675561.1 VC274080_0860 vibriobactin and enterobactin ABC transporter, ATP-binding protein 20650 21489 1
CDS vibD ZP_01675546.1 VC274080_0861 vibriobactin synthase component D 21420 22205 1
CDS - ZP_01675550.1 VC274080_0862 transcriptional regulator, LysR family 22215 23141 1
CDS - ZP_01675555.1 VC274080_0863 conserved hypothetical protein 23359 25341 1
CDS - ZP_01675505.1 VC274080_0864 sodium/alanine symporter 25421 26971 -1
CDS dadA ZP_01675479.1 VC274080_0865 D-amino acid dehydrogenase, small subunit 27349 28614 -1
CDS - ZP_01675502.1 VC274080_0866 transcriptional regulator, LysR family 28715 29647 1
CDS - ZP_01675511.1 VC274080_0867 hypothetical protein 29772 30101 1
CDS - ZP_01675457.1 VC274080_0868 hypothetical protein 30267 30539 1
CDS citB ZP_01675455.1 VC274080_0869 transcriptional regulator CitB 30573 31256 -1
CDS citA ZP_01675565.1 VC274080_0870 sensor kinase citA 31270 32967 -1
CDS oadB-2 ZP_01675534.1 VC274080_0871 oxaloacetate decarboxylase, beta subunit 33038 34339 -1
CDS oadA-2 ZP_01675513.1 VC274080_0872 oxaloacetate decarboxylase, alpha subunit 34355 36172 -1
CDS - ZP_01675525.1 VC274080_0873 oxaloacetate decarboxylase, gamma subunit, putative 36173 36445 -1
CDS citS ZP_01675485.1 VC274080_0874 citrate/sodium symporter 36540 37886 -1
CDS citC ZP_01675522.1 VC274080_0875 citrate (pro-3S)-lyase ligase 38148 39218 1
CDS citD ZP_01675514.1 VC274080_0876 citrate lyase, gamma subunit 39270 39566 1
CDS citE ZP_01675529.1 VC274080_0877 citrate lyase, beta subunit 39563 40438 1
CDS citF ZP_01675526.1 VC274080_0878 citrate lyase, alpha subunit 40374 41978 1
CDS citX ZP_01675478.1 VC274080_0879 apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 41975 42511 1
CDS citG ZP_01675544.1 VC274080_0880 triphosphoribosyl-dephospho-CoA synthase CitG 42570 43430 1
CDS - ZP_01675551.1 VC274080_0881 hypothetical protein 43777 44175 1
CDS - ZP_01675562.1 VC274080_0882 RNA methyltransferase, TrmH family 44250 45023 1
CDS - ZP_01675559.1 VC274080_0883 ferredoxin 45202 45525 -1
CDS - ZP_01675536.1 VC274080_0884 conserved hypothetical protein 45772 47388 1
CDS - ZP_01675553.1 VC274080_0885 hypothetical protein 47456 48139 -1
CDS - ZP_01675460.1 VC274080_0886 hypothetical protein 48272 50041 1
CDS - ZP_01675464.1 VC274080_0887 hypothetical protein 50233 50748 1
CDS - ZP_01675498.1 VC274080_0888 hypothetical protein 51082 51786 -1
CDS - ZP_01675542.1 VC274080_0889 ATP-dependent RNA helicase, DEAD/DEAH box family 51856 54795 -1
CDS - ZP_01675487.1 VC274080_0890 tellurite resistance protein-related protein 54796 55374 -1
CDS - ZP_01675528.1 VC274080_0891 transcriptional regulator, putative 55802 56281 -1
CDS - ZP_01675515.1 VC274080_0892 hypothetical protein 56266 57636 -1
CDS - ZP_01675454.1 VC274080_0893 transposase, putative 58225 59208 1
CDS - ZP_01675477.1 VC274080_0894 transposase, putative 59234 59374 -1
CDS - ZP_01675476.1 VC274080_0895 probable transposase for transposon 59696 59914 -1
CDS aldA-1 ZP_01675523.1 VC274080_0896 aldehyde dehydrogenase 60256 61881 -1
CDS tagA ZP_01675516.1 VC274080_0897 ToxR-activated gene A protein 62473 64998 1
CDS - ZP_01675500.1 VC274080_0898 hypothetical protein 65111 69712 1
CDS - ZP_01675495.1 VC274080_0899 hypothetical protein 69709 70647 1
CDS tagD ZP_01675466.1 VC274080_0900 tagD protein 70757 71251 1
CDS tcpI ZP_01675474.1 VC274080_0901 toxin co-regulated pilus biosynthesis protein I 71527 73389 -1
CDS tcpP ZP_01675512.1 VC274080_0902 toxin co-regulated pilus biosynthesis protein P 73829 74494 1
CDS tcpH ZP_01675507.1 VC274080_0903 toxin co-regulated pilus biosynthesis protein H 74479 74889 1
CDS tcpA ZP_01675492.1 VC274080_0904 toxin co-regulated pilin 75429 76103 1
CDS tcpB ZP_01675467.1 VC274080_0905 toxin co-regulated pilus biosynthesis protein B 76183 77475 1
CDS tcpQ ZP_01675557.1 VC274080_0906 toxin co-regulated pilus biosynthesis protein Q 77475 77927 1
CDS tcpC ZP_01675540.1 VC274080_0907 toxin co-regulated pilus biosynthesis outer membrane protein C 77930 79399 1
CDS tcpR ZP_01675554.1 VC274080_0908 toxin co-regulated pilus biosynthesis protein R 79392 79847 1
CDS tcpD ZP_01675510.1 VC274080_0909 toxin co-regulated pilus biosynthesis protein D 79835 80671 1
CDS tcpS ZP_01675531.1 VC274080_0910 toxin co-regulated pilus biosynthesis protein S 80687 81145 1
CDS tcpT ZP_01675506.1 VC274080_0911 toxin co-regulated pilus biosynthesis protein T 81135 82646 1
CDS tcpE ZP_01675482.1 VC274080_0912 toxin co-regulated pilus biosynthesis protein E 82621 83643 1
CDS tcpF ZP_01675503.1 VC274080_0913 toxin co-regulated pilus biosynthesis protein F 83653 84669 1
CDS tcpN/toxT ZP_01675533.1 VC274080_0914 TCP pilus virulence regulatory protein 84876 85706 1
CDS tcpJ ZP_01675491.1 VC274080_0915 leader peptidase TcpJ 85706 86467 1
CDS acfB ZP_01675552.1 VC274080_0916 accessory colonization factor AcfB 86474 88354 1
CDS acfC ZP_01675560.1 VC274080_0917 accessory colonization factor AcfC 88360 89130 1
CDS - ZP_01675499.1 VC274080_0918 conserved hypothetical protein 89146 89619 1
CDS tagE-1 ZP_01675451.1 VC274080_0919 tagE protein 89628 90536 1
CDS - ZP_01675490.1 VC274080_0920 lipoprotein, putative 91359 95921 1
CDS - ZP_01675549.1 VC274080_0921 integrase, phage family 96958 97116 -1
CDS - ZP_01675475.1 VC274080_0922 integrase, phage family 97836 99104 -1
CDS smpB ZP_01675539.1 VC274080_0924 small protein B 99706 100191 -1
CDS - ZP_01675473.1 VC274080_0925 conserved hypothetical protein 100369 100809 1
CDS - ZP_01675453.1 VC274080_0926 conserved hypothetical protein 100806 101117 1
CDS smpA ZP_01675484.1 VC274080_0927 small protein A 101195 101605 -1
CDS recN ZP_01675480.1 VC274080_0928 DNA repair protein RecN 101713 103377 -1
CDS - ZP_01675532.1 VC274080_0929 conserved hypothetical protein 103507 104391 -1
CDS grpE ZP_01675519.1 VC274080_0931 heat shock protein GrpE 104537 105139 1
CDS - ZP_01675486.1 VC274080_0930 hypothetical protein 105132 105245 -1
CDS dnaK ZP_01675471.1 VC274080_0932 dnaK protein 105403 107310 1
CDS dnaJ ZP_01675501.1 VC274080_0933 dnaJ protein 107511 108656 1
CDS - ZP_01675459.1 VC274080_0934 pilin, putative 108706 109149 -1
CDS - ZP_01675504.1 VC274080_0935 type IV pilin, putative 109204 109758 1
CDS - ZP_01675538.1 VC274080_0936 hypothetical protein 109727 110329 1
CDS - ZP_01675463.1 VC274080_0937 hypothetical protein 110320 111561 1
CDS - ZP_01675530.1 VC274080_0938 type IV pilin, putative 111551 111964 1
CDS - ZP_01675494.1 VC274080_0939 conserved hypothetical protein 112362 113921 1
CDS yfhC ZP_01675537.1 VC274080_0940 zinc-binding domain protein 113990 114571 1
CDS - ZP_01675563.1 VC274080_0941 hypothetical protein 114617 114748 -1
CDS - ZP_01675468.1 VC274080_0942 transglycosylase, Slt family 114927 116519 -1
CDS - ZP_01675541.1 VC274080_0943 hypothetical protein 116519 116641 -1