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Vibrio cholerae 2740-80, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_01676143.1 VC274080_0420 biotin carboxylase 1 161 1
CDS - ZP_01676135.1 VC274080_0419 biotin carboxylase 323 580 1
CDS prmA ZP_01676139.1 VC274080_0418 ribosomal protein L11 methyltransferase 789 1676 1
CDS - ZP_01676145.1 VC274080_0417 NifR3/Smm1 family protein 1789 2784 1
CDS fis ZP_01676158.1 VC274080_0416 factor-for-inversion stimulation protein 2808 3104 1
CDS gntR ZP_01676113.1 VC274080_0415 gluconate utilization system gnt-I transcriptional repressor 3242 4240 1
CDS edd ZP_01676108.1 VC274080_0414 phosphogluconate dehydratase 4316 6112 -1
CDS gntV ZP_01676111.1 VC274080_0413 thermoresistant gluconokinase 6109 6624 -1
CDS - ZP_01676105.1 VC274080_0412 gluconate permease, putative 6778 8154 1
CDS eda ZP_01676115.1 VC274080_0411 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase 8167 8772 1
CDS - ZP_01676088.1 VC274080_0410 TonB system receptor 8995 11037 1
CDS - ZP_01676094.1 VC274080_0409 hypothetical protein 11058 11735 1
CDS - ZP_01676100.1 VC274080_0408 methyl-accepting chemotaxis protein 11970 13640 1
CDS cadA ZP_01676096.1 VC274080_0407 lysine decarboxylase, inducible 13758 15959 -1
CDS - ZP_01676154.1 VC274080_0406 cadaverine/lysine antiporter CadB, putative 16003 17340 -1
CDS - ZP_01676104.1 VC274080_0405 hypothetical protein 17489 17617 -1
CDS - ZP_01676157.1 VC274080_0404 hypothetical protein 17628 17741 -1
CDS - ZP_01676093.1 VC274080_0403 transcriptional activator CadC, putative 18040 19665 -1
CDS - ZP_01676141.1 VC274080_0402 transcriptional regulator, MerR family 19826 20227 -1
CDS - ZP_01676156.1 VC274080_0401 hypothetical protein 20258 20437 1
CDS purH ZP_01676136.1 VC274080_0400 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 20513 22105 1
CDS purD ZP_01676146.1 VC274080_0399 phosphoribosylamine--glycine ligase 22164 23453 1
CDS - ZP_01676140.1 VC274080_0398 hypothetical protein 23553 24287 -1
CDS hupA ZP_01676130.1 VC274080_0397 DNA-binding protein HU 24288 24560 -1
CDS - ZP_01676150.1 VC274080_0396 conserved hypothetical protein 24932 25990 1
CDS - ZP_01676129.1 VC274080_0395 ROK family protein 26338 27318 -1
CDS manA-1 ZP_01676131.1 VC274080_0394 mannose-6-phosphate isomerase 27284 28351 -1
CDS - ZP_01676127.1 VC274080_0393 conserved hypothetical protein 28845 29513 -1
CDS - ZP_01676133.1 VC274080_0392 D-isomer specific 2-hydroxyacid dehydrogenase family protein 29506 30429 1
CDS - ZP_01676155.1 VC274080_0391 conserved hypothetical protein 30429 31001 1
CDS - ZP_01676134.1 VC274080_0390 conserved hypothetical protein 31056 32294 1
CDS - ZP_01676109.1 VC274080_0389 conserved hypothetical protein 32556 33923 -1
CDS - ZP_01676099.1 VC274080_0388 hypothetical protein 33963 34079 -1
CDS - ZP_01676124.1 VC274080_0387 capsule biosynthesis protein, putative 34066 34620 -1
CDS galE-1 ZP_01676128.1 VC274080_0386 UDP-glucose 4-epimerase 34628 35599 -1
CDS - ZP_01676098.1 VC274080_0385 hypothetical protein 35578 35691 1
CDS rfbU ZP_01676110.1 VC274080_0384 mannosyl-transferase 35752 37617 1
CDS rfbV ZP_01676153.1 VC274080_0383 lipopolysaccharide biosynthesis protein RfbV 37625 38737 1
CDS - ZP_01676106.1 VC274080_0382 RfbT protein 39324 39479 -1
CDS - ZP_01676101.1 VC274080_0381 transposase (IS4 family) 40029 40733 -1
CDS - ZP_01676107.1 VC274080_0380 conserved hypothetical protein, degenerate 40740 40937 -1
CDS - ZP_01676142.1 VC274080_0379 IS1004 transposase-related protein 41095 41175 -1
CDS - ZP_01676114.1 VC274080_0378 acetyltransferase RfbO, CysE/LacA/LpxA/NodL family 41325 41891 -1
CDS - ZP_01676144.1 VC274080_0377 acyl protein synthase/acyl-CoA reductase RfbN 41961 44438 -1
CDS - ZP_01676132.1 VC274080_0376 iron-containing alcohol dehydrogenase family protein RfbM 44429 45553 -1
CDS rfbL ZP_01676120.1 VC274080_0375 rfbL protein 45562 46977 -1
CDS - ZP_01676125.1 VC274080_0374 acyl carrier protein, putative 46983 47225 -1
CDS rfbI ZP_01676095.1 VC274080_0373 lipopolysaccharide/O-antigen transport protein 47264 48079 -1
CDS rfbH ZP_01676123.1 VC274080_0372 lipopolysaccharide/O-antigen transport protein 48018 48812 -1
CDS rfbG ZP_01676152.1 VC274080_0371 rfbG protein 48784 50175 -1
CDS rfbE ZP_01676148.1 VC274080_0370 perosamine synthase 50172 51275 -1
CDS gmd ZP_01676090.1 VC274080_0369 GDP-mannose 4,6-dehydratase 51286 52407 -1
CDS rfbB ZP_01676149.1 VC274080_0368 phosphomannomutase 52410 53801 -1
CDS rfbA ZP_01676083.1 VC274080_0367 mannose-1-phosphate guanylyltransferase 53804 55201 -1
CDS rfaD ZP_01676097.1 VC274080_0366 ADP-L-glycero-D-mannoheptose-6-epimerase 55643 56587 1
CDS - ZP_01676103.1 VC274080_0365 conserved hypothetical protein 56746 58518 1
CDS - ZP_01676092.1 VC274080_0364 transferase, hexapeptide repeat family 58526 59092 1
CDS - ZP_01676112.1 VC274080_0363 membrane protein, putative 59094 60293 1
CDS rfaF ZP_01676121.1 VC274080_0362 ADP-heptose--LPS heptosyltransferase II 60290 61330 1
CDS - ZP_01676086.1 VC274080_0361 lipopolysaccharide biosynthesis protein, putative 61327 62376 1
CDS - ZP_01676151.1 VC274080_0360 conserved hypothetical protein 62373 63161 1
CDS kdtA ZP_01676118.1 VC274080_0359 3-deoxy-D-manno-octulosonic-acid transferase 63122 64441 1
CDS - ZP_01676087.1 VC274080_0358 hypothetical protein 64438 64818 1
CDS - ZP_01676137.1 VC274080_0357 hypothetical protein 64821 66392 1
CDS - ZP_01676126.1 VC274080_0356 hypothetical protein 66389 67132 1
CDS - ZP_01676147.1 VC274080_0355 hypothetical protein 67129 68058 1
CDS - ZP_01676091.1 VC274080_0354 hypothetical protein 68062 69021 -1
CDS - ZP_01676117.1 VC274080_0353 conserved hypothetical protein 69025 69780 -1
CDS - ZP_01676119.1 VC274080_0352 lipopolysaccharide biosynthesis protein 69860 70933 1
CDS - ZP_01676138.1 VC274080_0351 glycosyl transferase, group 2 70976 71755 1
CDS - ZP_01676084.1 VC274080_0350 ADP-heptose--LPS heptosyltransferase II, putative 71817 72854 -1
CDS coaD ZP_01676122.1 VC274080_0349 phosphopantetheine adenylyltransferase 72965 73459 1
CDS mutM ZP_01676102.1 VC274080_0348 formamidopyrimidine-DNA glycosylase 73556 74365 -1
CDS - ZP_01676116.1 VC274080_0347 hypothetical protein 74375 74863 -1
CDS rpmG ZP_01676089.1 VC274080_0346 ribosomal protein L33 75084 75251 -1
CDS rpmB ZP_01676085.1 VC274080_0345 ribosomal protein L28 75348 75500 -1