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Vibrio cholerae 623-39, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_01980565.1 A59_A0001 hypothetical protein 1 88 1
CDS - ZP_01980533.1 A59_A0002 conserved hypothetical protein 139 384 1
CDS - ZP_01980576.1 A59_A0003 SM-20-related protein 522 1139 -1
CDS - ZP_01980491.1 A59_A0004 conserved hypothetical protein 1346 1669 1
CDS - ZP_01980418.1 A59_A0005 transcriptional regulator, LuxR family 1839 2513 -1
CDS ppiC ZP_01980487.1 A59_A0006 peptidyl-prolyl cis-trans isomerase C 3090 3368 -1
CDS - ZP_01980514.1 A59_A0007 putative chemotaxis protein CheV 3543 4463 1
CDS - ZP_01980570.1 A59_A0008 transcriptional regulator, MarR family 4539 5066 -1
CDS - ZP_01980466.1 A59_A0009 GGDEF family protein 5235 6254 1
CDS - ZP_01980587.1 A59_A0010 hypothetical protein 6374 6952 -1
CDS - ZP_01980469.1 A59_A0011 hypothetical protein 7099 8616 1
CDS - ZP_01980582.1 A59_A0012 GGDEF family protein 8896 10269 -1
CDS - ZP_01980507.1 A59_A0013 hypothetical protein 10611 11219 1
CDS - ZP_01980483.1 A59_A0014 hypothetical protein 11509 12717 1
CDS - ZP_01980553.1 A59_A0015 putative membrane protein 12742 13665 -1
CDS - ZP_01980430.1 A59_A0016 putative glycine cleavage operon activator 13766 14671 1
CDS - ZP_01980559.1 A59_A0017 GGDEF family protein 14823 16013 1
CDS - ZP_01980529.1 A59_A0018 conserved hypothetical protein 16016 16312 -1
CDS - ZP_01980474.1 A59_A0019 pirin family protein 16487 17335 1
CDS - ZP_01980512.1 A59_A0020 conserved hypothetical protein 17473 17787 -1
CDS - ZP_01980503.1 A59_A0021 hypothetical protein 18299 18739 1
CDS - ZP_01980521.1 A59_A0022 putative membrane protein 18748 20052 -1
CDS - ZP_01980542.1 A59_A0023 hypothetical protein 20109 20282 1
CDS - ZP_01980440.1 A59_A0024 methyl-accepting chemotaxis protein 20315 22000 -1
CDS - ZP_01980551.1 A59_A0025 hypothetical protein 21937 22053 1
CDS - ZP_01980425.1 A59_A0026 conserved hypothetical protein 22215 24575 -1
CDS - ZP_01980461.1 A59_A0027 hypothetical protein 24779 25273 1
CDS - ZP_01980510.1 A59_A0028 ABC transporter, ATP-binding protein 25302 26921 1
CDS - ZP_01980439.1 A59_A0029 putative amino acid ABC transporter, periplasmic amino acid-binding protein 27088 27819 -1
CDS - ZP_01980509.1 A59_A0030 methyl-accepting chemotaxis protein 27839 28723 -1
CDS - ZP_01980465.1 A59_A0031 hypothetical protein 29517 30260 -1
CDS - ZP_01980552.1 A59_A0032 transcriptional regulator, LysR family 30414 31313 -1
CDS - ZP_01980490.1 A59_A0033 putative L-lactate permease 31465 33213 1
CDS lldD ZP_01980486.1 A59_A0034 L-lactate dehydrogenase 33338 34474 1
CDS - ZP_01980475.1 A59_A0035 oxidoreductase/iron-sulfur cluster-binding protein 34571 37450 1
CDS - ZP_01980456.1 A59_A0036 conserved hypothetical protein 37534 38367 -1
CDS ppsA ZP_01980501.1 A59_A0037 phosphoenolpyruvate synthase 38502 40913 1
CDS - ZP_01980518.1 A59_A0038 methyl-accepting chemotaxis protein 41096 42652 1
CDS - ZP_01980452.1 A59_A0039 putative membrane protein 43010 44344 1
CDS - ZP_01980476.1 A59_A0040 ATP-dependent RNA helicase, DEAD box family 44423 45709 -1
CDS - ZP_01980426.1 A59_A0041 hypothetical protein 45819 46799 -1
CDS - ZP_01980460.1 A59_A0042 ABC transporter, ATP-binding protein 47156 49015 1
CDS - ZP_01980564.1 A59_A0043 hypothetical protein 49146 49871 1
CDS - ZP_01980443.1 A59_A0044 NADH-dependent flavin oxidoreductase, Oye family 49958 51001 -1
CDS - ZP_01980572.1 A59_A0045 transcriptional regulator, TetR family 51151 51726 1
CDS - ZP_01980416.1 A59_A0046 putative membrane protein 51798 52427 -1
CDS - ZP_01980532.1 A59_A0047 transcriptional regulator, AraC/XylS family 52644 53474 1
CDS - ZP_01980569.1 A59_A0048 AzlC family protein 53644 54363 1
CDS - ZP_01980506.1 A59_A0049 hypothetical protein 54360 54677 1
CDS - ZP_01980453.1 A59_A0050 conserved hypothetical protein 54728 55342 -1
CDS - ZP_01980479.1 A59_A0051 transcriptional regulator, MarR family 55458 55916 -1
CDS - ZP_01980580.1 A59_A0052 putative organic hydroperoxide resistance protein 56013 56450 1
CDS - ZP_01980419.1 A59_A0053 hypothetical protein 56540 56677 1
CDS - ZP_01980575.1 A59_A0054 putative outer membrane protein 56706 57701 1
CDS - ZP_01980424.1 A59_A0055 putative membrane protein 57862 58758 1
CDS - ZP_01980592.1 A59_A0056 glutaredoxin family protein 58785 59423 1
CDS - ZP_01980480.1 A59_A0057 conserved hypothetical protein 59637 60104 -1
CDS - ZP_01980523.1 A59_A0058 conserved hypothetical protein 60101 60832 -1
CDS - ZP_01980535.1 A59_A0060 NhaD 61225 62658 1
CDS - ZP_01980448.1 A59_A0059 response regulator of citrate/malate metabolism 62655 63332 -1
CDS - ZP_01980574.1 A59_A0061 signal transduction histidine kinase regulating citrate/malate metabolism 63335 64255 -1
CDS - ZP_01980586.1 A59_A0062 signal transduction histidine kinase regulating citrate/malate metabolism 64271 64897 -1
CDS - ZP_01980468.1 A59_A0063 hypothetical protein 64899 65051 1
CDS - ZP_01980547.1 A59_A0064 2-oxoglutarate/malate translocator 65168 66574 1
CDS - ZP_01980434.1 A59_A0065 putative lipoprotein 66636 67037 -1
CDS ogt ZP_01980441.1 A59_A0066 methylated-DNA--protein-cysteine S-methyltransferase 67048 67521 -1
CDS - ZP_01980437.1 A59_A0067 transcriptional regulator, Ada family/DNA-3-methyladenine glycosylase II 67522 68880 -1
CDS - ZP_01980494.1 A59_A0068 conserved hypothetical protein 69136 69582 1
CDS - ZP_01980583.1 A59_A0069 transcriptional regulator, LysR family 69659 70579 -1
CDS - ZP_01980442.1 A59_A0070 conserved hypothetical protein 70694 71053 1
CDS - ZP_01980584.1 A59_A0071 hypothetical protein 71132 73123 1
CDS - ZP_01980571.1 A59_A0072 hypothetical protein 73250 73591 -1
CDS nagB ZP_01980459.1 A59_A0073 glucosamine-6-phosphate isomerase 73866 74666 1
CDS - ZP_01980481.1 A59_A0074 conserved hypothetical protein 74796 75956 -1
CDS - ZP_01980568.1 A59_A0075 putative maltose operon periplasmic protein 76109 76945 -1
CDS ompS ZP_01980557.1 A59_A0076 maltoporin 77150 78400 -1
CDS glgX ZP_01980508.1 A59_A0077 glycogen operon protein GlgX 78820 80787 1
CDS - ZP_01980435.1 A59_A0078 hypothetical protein 80922 81173 1
CDS - ZP_01980526.1 A59_A0079 methyl-accepting chemotaxis protein 81633 83264 1
CDS - ZP_01980454.1 A59_A0080 hypothetical protein 83379 83786 -1
CDS - ZP_01980495.1 A59_A0081 hypothetical protein 83713 83847 -1
CDS - ZP_01980417.1 A59_A0082 putative extracellular solute-binding protein 84054 85430 -1
CDS - ZP_01980520.1 A59_A0083 methyl-accepting chemotaxis protein 85439 87439 -1
CDS - ZP_01980505.1 A59_A0084 hypothetical protein 87553 87870 1
CDS aroG ZP_01980548.1 A59_A0085 phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive 87964 89130 -1
CDS - ZP_01980515.1 A59_A0086 amino acid ABC transporter, ATP-binding protein 89318 90037 1
CDS - ZP_01980482.1 A59_A0087 amino acid ABC transporter, permease protein 90034 90834 1
CDS - ZP_01980522.1 A59_A0088 amino acid ABC transporter, periplasmic amino acid-binding protein 90885 91721 1
CDS - ZP_01980585.1 A59_A0089 amino acid ABC transporter, permease protein 91722 92618 1
CDS - ZP_01980516.1 A59_A0090 putative phosphomannomutase 92927 94630 1
CDS mtlA ZP_01980431.1 A59_A0091 PTS system, mannitol-specific IIABC component 95178 97127 1
CDS mtlD ZP_01980422.1 A59_A0092 mannitol-1-phosphate 5-dehydrogenase 97228 98382 1
CDS mtlR ZP_01980513.1 A59_A0093 mannitol operon repressor 98431 99012 1
CDS - ZP_01980458.1 A59_A0094 oxidoreductase, Gfo/Idh/MocA family 99126 100061 1
CDS - ZP_01980489.1 A59_A0095 hypothetical protein 100162 101040 -1
CDS - ZP_01980438.1 A59_A0097 hypothetical protein 101174 102097 1
CDS - ZP_01980432.1 A59_A0096 conserved hypothetical protein 102094 102525 -1
CDS - ZP_01980429.1 A59_A0098 putative membrane protein 102601 103323 -1
CDS - ZP_01980511.1 A59_A0099 regulatory protein PecM 103491 104396 -1
CDS - ZP_01980550.1 A59_A0100 regulatory protein, MarR 104526 105023 1