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Vibrio cholerae BX 330286, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - VCF_rna074 23S ribosomal RNA 221 3107 1
rRNA - - VCF_rna075 5S ribosomal RNA 3235 3354 1
tRNA - - VCF_rna076 tRNA-Asp 3378 3454 1
CDS - ZP_04396708.1 VCF_002424 adenosine deaminase 3697 4701 -1
CDS - ZP_04396709.1 VCF_002425 GGDEF family protein 4793 7342 -1
CDS - ZP_04396710.1 VCF_002426 nitrogen regulation protein NR(I) 7383 8789 -1
CDS - ZP_04396711.1 VCF_002427 nitrogen regulation protein NR(II) 8793 9857 -1
CDS - ZP_04396712.1 VCF_002428 hypothetical protein 9990 10580 -1
CDS - ZP_04396713.1 VCF_002429 glutamine synthetase type I 10758 12167 -1
CDS - ZP_04396714.1 VCF_002430 hypothetical protein 12312 12635 1
CDS - ZP_04396715.1 VCF_002433 hypothetical protein 14568 15122 1
CDS - ZP_04396716.1 VCF_002434 ribonuclease BN 15149 16042 1
CDS - ZP_04396717.1 VCF_002435 D-tyrosyl-tRNA(Tyr) deacylase 16060 16494 1
CDS - ZP_04396718.1 VCF_002436 galactoside O-acetyltransferase 16561 17493 1
CDS - ZP_04396719.1 VCF_002437 hypothetical protein 17535 19421 -1
CDS - ZP_04396720.1 VCF_002438 phosphoenolpyruvate carboxykinase [ATP] 19608 21236 -1
CDS - ZP_04396721.1 VCF_002439 heat-shock chaperonin 21573 22463 -1
CDS - ZP_04396722.1 VCF_002440 ribosome-associated heat shock protein 22482 22865 -1
CDS - ZP_04396723.1 VCF_002441 general secretion pathway protein C 23089 24006 1
CDS - ZP_04396724.1 VCF_002442 general secretion pathway protein D 24052 26076 1
CDS - ZP_04396725.1 VCF_002443 general secretion pathway protein E 26073 27584 1
CDS - ZP_04396726.1 VCF_002444 general secretion pathway protein F 27584 28804 1
CDS - ZP_04396727.1 VCF_002445 general secretion pathway protein G 28845 29285 1
CDS - ZP_04396728.1 VCF_002446 general secretion pathway protein H 29319 29903 1
CDS - ZP_04396729.1 VCF_002447 general secretion pathway protein I 29890 30246 1
CDS - ZP_04396730.1 VCF_002448 general secretion pathway protein J 30233 30898 1
CDS - ZP_04396731.1 VCF_002449 general secretion pathway protein K 30879 31898 1
CDS - ZP_04396732.1 VCF_002450 general secretion pathway protein L 31855 33078 1
CDS - ZP_04396733.1 VCF_002451 general secretion pathway protein M 33085 33585 1
CDS - ZP_04396734.1 VCF_002452 general secretion pathway protein N 33587 34345 1
CDS - ZP_04396735.1 VCF_002453 3'(2'),5'-bisphosphate nucleotidase 34397 35224 -1
CDS - ZP_04396736.1 VCF_002454 ADP compounds hydrolase NudE 35247 35813 -1
CDS - ZP_04396737.1 VCF_002455 NfuA Fe-S protein maturation 35934 36521 -1
CDS - ZP_04396738.1 VCF_002456 hypothetical protein 36609 37469 -1
CDS - ZP_04396739.1 VCF_002457 biotin synthesis protein BioH 37378 38166 1
CDS - ZP_04396740.1 VCF_002458 hypothetical protein 38328 38798 1
CDS - ZP_04396741.1 VCF_002459 transcription accessory protein 38890 41211 -1
CDS - ZP_04396742.1 VCF_002460 transcription elongation factor GreB 41456 41941 1
CDS - ZP_04396743.1 VCF_002461 two-component system response regulator OmpR 42079 42801 1
CDS - ZP_04396744.1 VCF_002462 osmolarity sensory histidine kinase EnvZ 42870 44186 1
CDS - ZP_04396745.1 VCF_002463 xanthine/uracil permease protein 44211 45653 -1
CDS - ZP_04396746.1 VCF_002464 ATP-dependent DNA helicase RecG 45962 48040 -1
CDS - ZP_04396747.1 VCF_002465 GTP pyrophosphokinase (p)ppGpp synthetase II/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 48159 50276 -1
CDS - ZP_04396748.1 VCF_002466 DNA-directed RNA polymerase omega subunit 50308 50580 -1
CDS - ZP_04396749.1 VCF_002467 guanylate kinase 50688 51377 -1
CDS - ZP_04396750.1 VCF_002468 hypothetical protein 51595 52350 1
CDS - ZP_04396751.1 VCF_002469 sodium:solute symporter family protein 52448 54199 -1
CDS - ZP_04396752.1 VCF_002470 hypothetical protein 54162 54428 -1
CDS - ZP_04396753.1 VCF_002471 hypothetical protein 54807 56552 1
CDS - ZP_04396754.1 VCF_002474 cytochrome c-type biogenesis protein DsbD protein-disulfide reductase 57454 59256 -1
CDS - ZP_04396755.1 VCF_002475 hypothetical protein 59183 59278 -1
CDS - ZP_04396756.1 VCF_002476 type II secretory pathway pullulanase 59416 61617 -1
CDS - ZP_04396757.1 VCF_002477 type II secretory pathway pullulanase 61524 63014 -1
CDS - ZP_04396758.1 VCF_002478 C4-dicarboxylate transporter anaerobic 63408 64715 -1
CDS - ZP_04396759.1 VCF_002479 aspartate ammonia-lyase 64843 66294 -1
CDS - ZP_04396760.1 VCF_002480 GGDEF family protein 66539 67477 1
CDS - ZP_04396761.1 VCF_002481 FxsA protein 67569 68054 1
CDS - ZP_04396762.1 VCF_002482 tRNA (cytosine34-2'-O-)-methyltransferase 68088 68564 -1
CDS - ZP_04396763.1 VCF_002483 manganese superoxide dismutase 68617 69234 -1
CDS - ZP_04396764.1 VCF_002484 copper sensory histidine kinase CpxA 69367 70761 -1
CDS - ZP_04396765.1 VCF_002485 copper-sensing two-component system response regulator CpxR 70761 71447 -1
CDS - ZP_04396766.1 VCF_002486 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc- resistance associated protein 71635 72138 1
CDS - ZP_04396767.1 VCF_002487 cobalt-zinc-cadmium resistance protein 72336 73244 1
CDS - ZP_04396768.1 VCF_002488 6-phosphofructokinase 73501 74469 1
CDS - ZP_04396769.1 VCF_002489 fructose-1,6-bisphosphatase GlpX type 74546 75604 -1
CDS - ZP_04396770.1 VCF_002490 hypothetical protein 75721 75825 -1
CDS - ZP_04396771.1 VCF_002491 hypothetical protein 75874 76116 1
CDS - ZP_04396772.1 VCF_002492 5,10-methylenetetrahydrofolate reductase 76179 77093 -1
CDS - ZP_04396773.1 VCF_002493 hypothetical protein 77147 77251 1
CDS - ZP_04396774.1 VCF_002494 aspartokinase/homoserine dehydrogenase 77353 79764 -1
CDS - ZP_04396775.1 VCF_002495 cystathionine gamma-synthase 79777 80943 -1
CDS - ZP_04396776.1 VCF_002496 methionine repressor MetJ 81211 81528 1
CDS - ZP_04396777.1 VCF_002497 NADP-dependent malic enzyme 81639 82916 -1
CDS - ZP_04396778.1 VCF_002498 LSU ribosomal protein L31p 83224 83442 -1
CDS - ZP_04396779.1 VCF_002499 helicase PriA essential for oriC/DnaA-independent DNA replication 83697 85901 1
CDS - ZP_04396780.1 VCF_002500 transcriptional (co)regulator CytR 86207 87214 1
CDS - ZP_04396781.1 VCF_002501 cell division protein 87386 87937 1
CDS - ZP_04396782.1 VCF_002502 ATP-dependent protease HslV 88074 88631 1
CDS - ZP_04396783.1 VCF_002503 ATP-dependent hsl protease ATP-binding subunit HslU 88697 90028 1
CDS - ZP_04396784.1 VCF_002504 1,4-dihydroxy-2-naphthoate octaprenyltransferase 90132 91049 1
CDS - ZP_04396785.1 VCF_002505 ribonuclease E inhibitor RraA 91124 91639 1
CDS - ZP_04396786.1 VCF_002506 Na+-driven multidrug efflux pump 91726 93108 -1
CDS - ZP_04396787.1 VCF_002507 triosephosphate isomerase 93226 94023 -1
CDS - ZP_04396788.1 VCF_002508 5-carboxymethyl-2-hydroxymuconate delta-isomerase 94243 94593 1
CDS - ZP_04396789.1 VCF_002509 hypothetical protein 94613 95053 1
CDS - ZP_04396790.1 VCF_002510 hypothetical protein 95180 95539 -1
CDS - ZP_04396791.1 VCF_002511 hypothetical protein 95678 96295 -1
CDS - ZP_04396792.1 VCF_002512 heat shock protein 60 family co-chaperone GroES 96655 96945 1
CDS - ZP_04396793.1 VCF_002513 heat shock protein 60 family chaperone GroEL 96999 98633 1
CDS - ZP_04396794.1 VCF_002514 hypothetical protein 98844 99404 1
CDS - ZP_04396795.1 VCF_002515 lysine 2,3-aminomutase 99441 100463 -1
CDS - ZP_04396796.1 VCF_002516 translation elongation factor P 100496 101062 1
CDS - ZP_04396797.1 VCF_002517 fumarate reductase subunit D 101176 101559 -1
CDS - ZP_04396798.1 VCF_002518 fumarate reductase subunit C 101549 101932 -1
CDS - ZP_04396799.1 VCF_002519 succinate dehydrogenase iron-sulfur protein 101935 102693 -1
CDS - ZP_04396800.1 VCF_002520 succinate dehydrogenase flavoprotein subunit 102693 104501 -1
CDS - ZP_04396801.1 VCF_002521 lysyl-tRNA synthetase-related protein 104810 105784 1
CDS - ZP_04396802.1 VCF_002522 rhodanese-related sulfurtransferase 105914 106348 1
CDS - ZP_04396803.1 VCF_002523 chaperone protein SecB 106515 106979 1
CDS - ZP_04396804.1 VCF_002524 glycerol-3-phosphate dehydrogenase [NAD(P)+] 107169 108203 1