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Vibrio cholerae BX 330286, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04397772.1 VCF_003503 protoporphyrinogen IX oxidase oxygen-independent HemG 197 721 -1
CDS - ZP_04397773.1 VCF_003504 potassium uptake protein TrkH 744 2201 -1
CDS - ZP_04397774.1 VCF_003505 hypothetical protein 2221 2853 -1
CDS - ZP_04397775.1 VCF_003506 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase 3064 5235 1
CDS - ZP_04397776.1 VCF_003507 3-ketoacyl-CoA thiolase 5261 6424 1
CDS - ZP_04397777.1 VCF_003508 hypothetical protein 6491 7396 -1
CDS - ZP_04397778.1 VCF_003509 multidrug resistance protein 7555 8757 1
CDS - ZP_04397779.1 VCF_003510 N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate N-acetyltransferase 8819 10180 -1
CDS - ZP_04397780.1 VCF_003511 ATP synthase epsilon chain 10427 10849 -1
CDS - ZP_04397781.1 VCF_003512 ATP synthase beta chain 10868 12271 -1
CDS - ZP_04397782.1 VCF_003513 ATP synthase gamma chain 12306 13172 -1
CDS - ZP_04397783.1 VCF_003514 ATP synthase alpha chain 13217 14788 -1
CDS - ZP_04397784.1 VCF_003515 ATP synthase delta chain 14772 15305 -1
CDS - ZP_04397785.1 VCF_003516 ATP synthase B chain 15320 15790 -1
CDS - ZP_04397786.1 VCF_003517 ATP synthase C chain 15864 16121 -1
CDS - ZP_04397787.1 VCF_003518 ATP synthase A chain 16165 16977 -1
CDS - ZP_04397788.1 VCF_003519 ATP synthase protein I 16986 17375 -1
CDS - ZP_04397789.1 VCF_003520 chromosome (plasmid) partitioning protein ParB/stage 0 sporulation protein J 17565 18446 -1
CDS - ZP_04397790.1 VCF_003521 chromosome (plasmid) partitioning protein ParA/sporulation initiation inhibitor protein soj 18473 19246 -1
CDS - ZP_04397791.1 VCF_003522 ribosomal RNA small subunit methyltransferase G 19261 19893 -1
CDS - ZP_04397792.1 VCF_003523 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 19893 21788 -1
CDS - ZP_04397793.1 VCF_003524 flavoprotein MioC 22263 22697 -1
CDS - ZP_04397794.1 VCF_003525 GTPase and tRNA-U34 5-formylation enzyme TrmE 22707 24068 -1
CDS - ZP_04397795.1 VCF_003526 OxaI/YidC membrane insertion protein 24162 25787 -1
CDS - ZP_04397796.1 VCF_003527 ribonuclease P protein component 26014 26370 -1
CDS - ZP_04397797.1 VCF_003528 LSU ribosomal protein L34p 26383 26613 -1
CDS - ZP_04397798.1 VCF_003529 ABC-type polar amino acid transport system ATPase component 26762 27499 -1
CDS - ZP_04397799.1 VCF_003530 amino acid ABC transporter permease protein 27496 28167 -1
CDS - ZP_04397800.1 VCF_003531 amino acid ABC transporter amino acid-binding portion 28245 28991 -1
CDS - ZP_04397801.1 VCF_003532 chromosomal replication initiator protein dnaA 29303 30706 1
CDS - ZP_04397802.1 VCF_003533 DNA polymerase III beta subunit 30764 31864 1
CDS - ZP_04397803.1 VCF_003534 DNA recombination and repair protein RecF 31882 32973 1
CDS - ZP_04397804.1 VCF_003535 DNA gyrase subunit B 32994 35411 1
CDS - ZP_04397805.1 VCF_003536 hypothetical protein 35818 36258 1
CDS - ZP_04397806.1 VCF_003537 hypothetical protein 36268 36384 1
CDS - ZP_04397807.1 VCF_003538 heat shock protein A 36660 37097 1
CDS - ZP_04397808.1 VCF_003539 valine--pyruvate aminotransferase 37185 38441 -1
CDS - ZP_04397809.1 VCF_003540 glycyl-tRNA synthetase beta chain 38760 40826 -1
CDS - ZP_04397810.1 VCF_003541 glycyl-tRNA synthetase alpha chain 40841 41758 -1
CDS - ZP_04397811.1 VCF_003542 hypothetical protein 42174 42728 1
CDS - ZP_04397812.1 VCF_003543 NADH dehydrogenase subunit II-related protein 42834 43091 1
CDS - ZP_04397813.1 VCF_003544 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA 43178 43426 -1
CDS - ZP_04397814.1 VCF_003545 hypothetical protein 43547 43747 1
CDS - ZP_04397815.1 VCF_003546 alcohol dehydrogenase 43919 44899 -1
CDS - ZP_04397816.1 VCF_003547 threonine dehydratase biosynthetic 45147 46679 -1
CDS - ZP_04397817.1 VCF_003548 dihydroxy-acid dehydratase 46683 48524 -1
CDS - ZP_04397818.1 VCF_003549 branched-chain amino acid aminotransferase 48534 49493 -1
CDS - ZP_04397819.1 VCF_003550 acetolactate synthase small subunit 49484 49768 -1
CDS - ZP_04397820.1 VCF_003551 acetolactate synthase large subunit 49780 51426 -1
CDS - ZP_04397821.1 VCF_003552 Mg(2+) chelatase family protein/ComM-related protein 51960 53483 1
CDS - ZP_04397822.1 VCF_003553 1-acyl-sn-glycerol-3-phosphate acyltransferase 53573 54457 1
CDS - ZP_04397823.1 VCF_003554 periplasmic thiol:disulfide interchange protein DsbA 54534 55148 -1
CDS - ZP_04397824.1 VCF_003555 YihE protein required for LPS synthesis 55167 56189 -1
CDS - ZP_04397825.1 VCF_003556 type cbb3 cytochrome oxidase biogenesis protein CcoG involved in Cu oxidation 56201 57688 -1
CDS - ZP_04397826.1 VCF_003557 protein YihD 58042 58320 -1
CDS - ZP_04397827.1 VCF_003558 hypothetical protein 58338 58568 1
CDS - ZP_04397828.1 VCF_003559 hypothetical protein 58869 59660 1
CDS - ZP_04397829.1 VCF_003560 hypothetical protein 59744 60385 1
CDS - ZP_04397830.1 VCF_003561 hypothetical protein 60424 61080 -1
CDS - ZP_04397831.1 VCF_003562 potassium uptake protein TrkH 60993 62438 -1
CDS - ZP_04397832.1 VCF_003563 Trk system potassium uptake protein TrkA 62450 63856 -1
CDS - ZP_04397833.1 VCF_003564 ribosomal RNA small subunit methyltransferase B 63888 65168 -1
CDS - ZP_04397834.1 VCF_003565 methionyl-tRNA formyltransferase 65224 66171 -1
CDS - ZP_04397835.1 VCF_003566 peptide deformylase 66189 66773 -1
CDS - ZP_04397836.1 VCF_003567 LysM domain-containing protein 66838 67965 1
CDS - ZP_04397837.1 VCF_003568 hypothetical protein 67965 69080 1
CDS - ZP_04397838.1 VCF_003569 hypothetical protein 69083 69559 1
CDS - ZP_04397839.1 VCF_003570 hypothetical protein 69569 70141 1
CDS - ZP_04397840.1 VCF_003571 phosphoribosylaminoimidazole carboxylase ATPase subunit 70214 71347 -1
CDS - ZP_04397841.1 VCF_003572 phosphoribosylaminoimidazole carboxylase catalytic subunit 71351 71836 -1
CDS - ZP_04397842.1 VCF_003573 Sua5 YciO YrdC YwlC family protein 71994 72560 1
CDS - ZP_04397843.1 VCF_003574 coproporphyrinogen III oxidase aerobic 72579 73496 1
CDS - ZP_04397844.1 VCF_003575 shikimate 5-dehydrogenase I alpha 73558 74394 1
CDS - ZP_04397845.1 VCF_003576 hypothetical protein 74391 74666 1
CDS - ZP_04397846.1 VCF_003577 carbonic anhydrase family 3 74647 75201 -1
CDS - ZP_04397847.1 VCF_003578 hypothetical protein 75387 75527 1
rRNA - - VCF_rna106 16S ribosomal RNA 75713 77249 1
tRNA - - VCF_rna107 tRNA-Ala 77312 77387 1
rRNA - - VCF_rna108 23S ribosomal RNA 77675 80561 1
rRNA - - VCF_rna109 5S ribosomal RNA 80689 80808 1
tRNA - - VCF_rna110 tRNA-Asp 80832 80908 1
tRNA - - VCF_rna111 tRNA-Trp 80938 81014 1
CDS - ZP_04397848.1 VCF_003579 CrbC-like protein 81247 81627 1
CDS - ZP_04397849.1 VCF_003580 thiamin biosynthesis protein ThiC 81879 83816 1
CDS - ZP_04397850.1 VCF_003581 thiamin-phosphate pyrophosphorylase 83820 85142 1
CDS - ZP_04397851.1 VCF_003582 sulfur carrier protein adenylyltransferase ThiF 85129 85905 1
CDS - ZP_04397852.1 VCF_003583 sulfur carrier protein ThiS 85848 86105 1
CDS - ZP_04397853.1 VCF_003584 thiazole biosynthesis protein ThiG 86111 86881 1
CDS - ZP_04397854.1 VCF_003585 thiazole biosynthesis protein ThiH 86878 87990 1
CDS - ZP_04397855.1 VCF_003586 Xaa-Pro aminopeptidase 88215 90008 -1
CDS - ZP_04397856.1 VCF_003587 LysR-family transcriptional regulator 90141 91082 -1
CDS - ZP_04397857.1 VCF_003588 hypothetical protein 91187 92389 1
CDS - ZP_04397858.1 VCF_003589 hypothetical protein 92493 92777 1
CDS - ZP_04397859.1 VCF_003590 transcriptional regulator AsnC 92866 93327 -1
CDS - ZP_04397860.1 VCF_003591 sensory box/GGDEF family protein 93403 95709 1
CDS - ZP_04397861.1 VCF_003592 SAM-dependent methyltransferase 95676 96554 1
CDS - ZP_04397862.1 VCF_003593 hypothetical protein 96672 97061 1
CDS - ZP_04397863.1 VCF_003594 MadN protein 97157 98044 -1
CDS - ZP_04397864.1 VCF_003595 universal stress protein A 98101 98526 -1
CDS - ZP_04397865.1 VCF_003596 ferritin-like protein 2 98673 99218 1