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Vibrio cholerae BX 330286, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04397938.1 VCF_000001 hypothetical protein 19 5592 1
CDS - ZP_04397939.1 VCF_000002 hypothetical protein 5702 6250 -1
CDS - ZP_04397940.1 VCF_000003 permease 6307 7524 -1
CDS - ZP_04397941.1 VCF_000004 transcriptional regulator LysR family 7609 8499 1
CDS - ZP_04397942.1 VCF_000005 glutaredoxin 8530 8763 -1
CDS - ZP_04397943.1 VCF_000006 hypothetical protein 8931 9443 1
CDS - ZP_04397944.1 VCF_000007 hypothetical protein 9440 10528 1
CDS - ZP_04397945.1 VCF_000008 hypothetical protein 10790 10951 1
CDS - ZP_04397946.1 VCF_000009 type IV pilus (Tfp) assembly protein PilF 10955 11668 -1
CDS - ZP_04397947.1 VCF_000010 homoserine O-succinyltransferase 11877 12836 -1
CDS - ZP_04397948.1 VCF_000011 hypothetical protein 12959 13333 1
CDS - ZP_04397949.1 VCF_000012 ABC-type multidrug transport system permease component 13337 14485 -1
CDS - ZP_04397950.1 VCF_000013 ABC-type multidrug transport system permease component 14482 15630 -1
CDS - ZP_04397951.1 VCF_000014 membrane-fusion protein 15649 16623 -1
CDS - ZP_04397952.1 VCF_000015 outer membrane protein 16635 18065 -1
CDS - ZP_04397953.1 VCF_000016 sensor kinase CitA 18795 20411 1
CDS - ZP_04397954.1 VCF_000017 transcriptional regulatory protein CitB 20411 21097 1
CDS - ZP_04397955.1 VCF_000018 ABC-type amino acid transport system periplasmatic component 21163 21939 1
CDS - ZP_04397956.1 VCF_000019 chemotaxis protein CheV 21958 22944 1
CDS - ZP_04397957.1 VCF_000020 hypothetical protein 23076 23879 1
CDS - ZP_04397958.1 VCF_000021 hypothetical protein 23994 24683 1
CDS - ZP_04397959.1 VCF_000022 GGDEF family protein 24686 25747 -1
tRNA - - VCF_rna001 tRNA-Val 26019 26095 1
tRNA - - VCF_rna002 tRNA-Val 26117 26193 1
CDS - ZP_04397960.1 VCF_000023 ABC transporter substrate-binding protein-related protein 26363 27124 -1
CDS - ZP_04397961.1 VCF_000024 hypothetical protein 27366 28769 1
CDS - ZP_04397962.1 VCF_000025 galactose-1-phosphate uridylyltransferase 29207 30277 1
CDS - ZP_04397963.1 VCF_000026 galactokinase 30286 31503 1
CDS - ZP_04397964.1 VCF_000027 aldose 1-epimerase 31512 32564 1
CDS - ZP_04397965.1 VCF_000028 GGDEF family protein 32582 33871 -1
CDS - ZP_04397966.1 VCF_000029 diguanylate cyclase/phosphodiesterase domain 2 (EAL) 33954 34808 -1
CDS - ZP_04397967.1 VCF_000030 oxidoreductase short-chain dehydrogenase/reductase family 35046 35804 -1
CDS - ZP_04397968.1 VCF_000031 acetolactate synthase catabolic 35801 37504 -1
CDS - ZP_04397969.1 VCF_000032 alpha-acetolactate decarboxylase 37643 38428 -1
CDS - ZP_04397970.1 VCF_000033 transcriptional regulator of alpha-acetolactate operon AlsR 38537 39415 1
CDS - ZP_04397971.1 VCF_000034 membrane protein 39604 40044 -1
CDS - ZP_04397972.1 VCF_000035 hypothetical protein 40024 40125 1
CDS - ZP_04397973.1 VCF_000036 catalase 40523 42001 1
CDS - ZP_04397974.1 VCF_000037 AnkB protein 42065 42631 1
CDS - ZP_04397975.1 VCF_000038 superoxide dismutase [Cu-Zn] precursor 42671 43186 1
CDS - ZP_04397976.1 VCF_000039 hypothetical protein 43231 45747 -1
CDS - ZP_04397977.1 VCF_000040 NADH dehydrogenase subunit 5 45744 47294 -1
CDS - ZP_04397978.1 VCF_000041 transcriptional regulator LysR family 47413 48285 1
CDS - ZP_04397979.1 VCF_000042 enterobactin synthetase component F 48349 50019 1
CDS - ZP_04397980.1 VCF_000043 hypothetical protein 50003 50239 1
CDS - ZP_04397981.1 VCF_000044 lipid A biosynthesis lauroyl acyltransferase 50349 51062 1
CDS - ZP_04397982.1 VCF_000045 hypothetical protein 51218 51535 1
CDS - ZP_04397983.1 VCF_000046 hypothetical protein 51565 52023 1
CDS - ZP_04397984.1 VCF_000047 hypothetical protein 52101 52451 1
CDS - ZP_04397985.1 VCF_000048 fumarate hydratase class II 52596 53981 -1
CDS - ZP_04397986.1 VCF_000049 hypothetical protein 53997 54377 -1
CDS - ZP_04397987.1 VCF_000050 cytochrome d ubiquinol oxidase subunit I 54900 56237 1
CDS - ZP_04397988.1 VCF_000051 cytochrome d ubiquinol oxidase subunit II 56234 57226 1
CDS - ZP_04397989.1 VCF_000052 ABC transporter ATP-binding protein 57300 58001 -1
CDS - ZP_04397990.1 VCF_000053 ABC-type antimicrobial peptide transport system permease component 58001 59278 -1
CDS - ZP_04397991.1 VCF_000054 ABC-type antimicrobial peptide transport system permease component 59282 60496 -1
CDS - ZP_04397992.1 VCF_000055 outer membrane protein 60496 61755 -1
CDS - ZP_04397993.1 VCF_000056 membrane-fusion protein 61748 62881 -1
CDS - ZP_04397994.1 VCF_000057 beta-lactamase-related protein 63058 64182 -1
CDS - ZP_04397995.1 VCF_000058 LysR-family transcriptional regulator 64294 65223 1
CDS - ZP_04397996.1 VCF_000059 catalase/peroxidase 65288 67462 -1
CDS - ZP_04397997.1 VCF_000060 hypothetical protein 67483 67584 -1
CDS - ZP_04397998.1 VCF_000061 6-phospho-beta-glucosidase 67875 69311 1
CDS - ZP_04397999.1 VCF_000062 possible regulatory protein 69347 70381 1
CDS - ZP_04398000.1 VCF_000063 hypothetical protein 70516 70878 1
CDS - ZP_04398001.1 VCF_000064 hypothetical protein 70847 71359 1
CDS - ZP_04398002.1 VCF_000065 glycerophosphoryl diester phosphodiesterase 71435 72148 -1
CDS - ZP_04398003.1 VCF_000066 glycerol-3-phosphate regulon repressor DeoR family 72176 72937 -1
CDS - ZP_04398004.1 VCF_000067 SN-glycerol-3-phosphate transport ATP-binding protein UgpC 72962 74080 -1
CDS - ZP_04398005.1 VCF_000068 SN-glycerol-3-phosphate transport system permease protein UgpE 74133 74975 -1
CDS - ZP_04398006.1 VCF_000069 SN-glycerol-3-phosphate transport system permease protein UgpA 74985 75878 -1
CDS - ZP_04398007.1 VCF_000070 glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein 75942 77246 -1
CDS - ZP_04398008.1 VCF_000071 TonB system biopolymer transport component 77565 78323 1
CDS - ZP_04398009.1 VCF_000072 MotA/TolQ/ExbB proton channel family protein 78323 79696 1
CDS - ZP_04398010.1 VCF_000073 ferric siderophore transport system biopolymer transport protein ExbB 79703 80245 1
CDS - ZP_04398011.1 VCF_000074 biopolymer transport protein ExbD/TolR 80242 80646 1
CDS - ZP_04398012.1 VCF_000075 ferric siderophore transport system binding protein TonB 80646 81266 1
CDS - ZP_04398013.1 VCF_000076 hypothetical protein 81263 82441 1
CDS - ZP_04398014.1 VCF_000077 ATP-dependent DNA ligase 82742 83596 1
CDS - ZP_04398015.1 VCF_000078 hypothetical protein 83603 84586 -1
CDS - ZP_04398016.1 VCF_000079 multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE family of MDR efflux pumps 84790 86175 -1
CDS - ZP_04398017.1 VCF_000080 hypothetical protein 86418 86621 -1
CDS - ZP_04398018.1 VCF_000081 fructosamine kinase family protein 86779 87645 -1
CDS - ZP_04398019.1 VCF_000082 type IIA topoisomerase B subunit 88168 88509 1
CDS - ZP_04398020.1 VCF_000083 lipoprotein NlpC 88519 89019 -1
CDS - ZP_04398021.1 VCF_000084 hypothetical protein 89114 91129 1
CDS - ZP_04398022.1 VCF_000085 sterol desaturase 91131 92033 -1
CDS - ZP_04398023.1 VCF_000086 hypothetical protein 91981 92082 -1
CDS - ZP_04398024.1 VCF_000087 hypothetical protein 92022 92759 1
CDS - ZP_04398025.1 VCF_000088 ROK family protein 92922 93830 1
CDS - ZP_04398026.1 VCF_000089 hypothetical protein 94037 94312 -1
CDS - ZP_04398027.1 VCF_000090 ABC-type amino acid transport/signal transduction system 94528 94953 1
CDS - ZP_04398028.1 VCF_000091 ABC-type amino acid transport/signal transduction system 94926 95306 1
CDS - ZP_04398029.1 VCF_000092 molybdopterin-guanine dinucleotide biosynthesis protein B 95396 97216 -1
CDS - ZP_04398030.1 VCF_000093 molybdopterin-guanine dinucleotide biosynthesis protein A 97213 97743 -1
CDS - ZP_04398031.1 VCF_000094 ABC-type tungstate transport system ATP-binding protein 97778 98500 -1
CDS - ZP_04398032.1 VCF_000095 ABC-type tungstate transport system permease protein 98509 99207 -1
CDS - ZP_04398033.1 VCF_000096 ABC-type tungstate transport system binding protein 99214 100041 -1
CDS - ZP_04398034.1 VCF_000097 sigma-54 dependent response regulator 100333 101787 1
CDS - ZP_04398035.1 VCF_000098 signal transduction histidine kinase 101777 103810 1