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Vibrio cholerae Ind5 integrating conjugative element ICEVchind5, complete sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ACV96332.1 ICEVCHIND5_0001 conserved domain protein 565 753 1
CDS - ACV96373.1 ICEVCHIND5_0002 putative DNA mismatch repair protein 899 2917 1
CDS - ACV96374.1 ICEVCHIND5_0003 integrase 3047 4288 -1
CDS - ACV96360.1 ICEVCHIND5_0004 conserved hypothetical protein 4290 4559 -1
CDS - ACV96368.1 ICEVCHIND5_0005 conserved hypothetical protein 4562 5536 -1
CDS - ACV96409.1 ICEVCHIND5_0006 hypothetical protein 5632 5799 1
CDS - ACV96398.1 ICEVCHIND5_0007 hypothetical protein 5844 5978 1
CDS - ACV96372.1 ICEVCHIND5_0008 conserved hypothetical protein 6001 6444 1
CDS - ACV96385.1 ICEVCHIND5_0009 protein UmuC 6455 7627 -1
CDS - ACV96356.1 ICEVCHIND5_0010 transposase, IS3 family, interruption 7911 8504 1
CDS - ACV96343.1 ICEVCHIND5_0011 transposase 8618 11596 1
CDS - ACV96353.1 ICEVCHIND5_0012 iscr2 transposase 12014 13507 1
CDS - ACV96345.1 ICEVCHIND5_0013 conserved hypothetical protein 13538 14422 1
CDS - ACV96348.1 ICEVCHIND5_0014 florfenicol/chloramphenicol resistance protein 14639 15853 1
CDS - ACV96319.1 ICEVCHIND5_0015 truncated helix-turn-helix multiple antibiotic resistance protein 15908 16186 1
CDS - ACV96352.1 ICEVCHIND5_0017 truncated transposase 16298 16837 1
CDS - ACV96389.1 ICEVCHIND5_0016 streptomycin resistance protein B 16809 17639 -1
CDS - ACV96359.1 ICEVCHIND5_0018 streptomycin 3''-kinase 17645 18448 -1
CDS folP ACV96358.1 ICEVCHIND5_0019 dihydropteroate synthase 18509 19324 -1
CDS - ACV96403.1 ICEVCHIND5_0021 TnpA 19795 21147 1
CDS - ACV96396.1 ICEVCHIND5_0020 transposase, Mutator family 21139 22350 -1
CDS - ACV96340.1 ICEVCHIND5_0022 MutL protein 22408 22911 -1
CDS - ACV96393.1 ICEVCHIND5_0023 ultraviolet light resistance protein B 23064 23333 -1
CDS - ACV96386.1 ICEVCHIND5_0024 protein UmuD 23341 23790 -1
CDS - ACV96354.1 ICEVCHIND5_0025 hypothetical protein 23909 24046 1
CDS - ACV96322.1 ICEVCHIND5_0026 exonuclease, RNase T and DNA polymerase III 24430 25335 1
CDS - ACV96411.1 ICEVCHIND5_0027 conserved hypothetical protein 25423 25722 1
CDS - ACV96391.1 ICEVCHIND5_0028 conserved hypothetical protein 26040 26960 1
CDS - ACV96376.1 ICEVCHIND5_0029 hypothetical protein 26978 27778 1
CDS - ACV96366.1 ICEVCHIND5_0030 conserved hypothetical protein 27762 28310 1
CDS - ACV96339.1 ICEVCHIND5_0031 conserved hypothetical protein 28323 32012 1
CDS - ACV96325.1 ICEVCHIND5_0032 conserved hypothetical protein 32017 35757 1
CDS - ACV96334.1 ICEVCHIND5_0033 PglZ domain family 35770 38073 1
CDS - ACV96324.1 ICEVCHIND5_0034 conserved hypothetical protein 38112 40163 1
CDS - ACV96394.1 ICEVCHIND5_0035 conserved hypothetical protein 40190 40960 1
CDS - ACV96380.1 ICEVCHIND5_0037 conserved hypothetical protein 40995 41810 1
CDS - ACV96395.1 ICEVCHIND5_0036 hypothetical protein 41787 41909 -1
CDS - ACV96327.1 ICEVCHIND5_0038 conjugative relaxase 41932 44082 1
CDS - ACV96363.1 ICEVCHIND5_0039 conjugative coupling factor 44131 45951 1
CDS - ACV96349.1 ICEVCHIND5_0040 conserved hypothetical protein 45961 46521 1
CDS - ACV96331.1 ICEVCHIND5_0041 putative conjugation coupling factor 46508 47143 1
CDS - ACV96326.1 ICEVCHIND5_0042 conserved hypothetical protein 47170 47757 -1
CDS traL ACV96318.1 ICEVCHIND5_0043 type IV conjugative transfer system protein TraL 48046 48327 1
CDS - ACV96336.1 ICEVCHIND5_0044 sex pilus assembly 48324 48950 1
CDS - ACV96410.1 ICEVCHIND5_0045 TraK 48934 49830 1
CDS - ACV96344.1 ICEVCHIND5_0046 sex pilus assembly 49833 51122 1
CDS - ACV96342.1 ICEVCHIND5_0047 sex pilus assembly 51119 51769 1
CDS - ACV96404.1 ICEVCHIND5_0048 TraA 51766 52152 1
CDS - ACV96347.1 ICEVCHIND5_0049 conserved hypothetical protein 52373 53164 1
CDS - ACV96371.1 ICEVCHIND5_0050 ync 53157 54095 1
CDS - ACV96323.1 ICEVCHIND5_0051 DsbC 54227 54919 1
CDS traC ACV96320.1 ICEVCHIND5_0052 type-IV secretion system protein TraC 54919 57318 1
CDS - ACV96341.1 ICEVCHIND5_0053 conserved hypothetical protein 57311 57658 1
CDS - ACV96335.1 ICEVCHIND5_0054 conjugation signal peptidase 57642 58154 1
CDS - ACV96399.1 ICEVCHIND5_0056 sex pilus assembly 59273 60301 1
CDS - ACV96381.1 ICEVCHIND5_0057 mating pair stabilization 60304 63996 1
CDS - ACV96405.1 ICEVCHIND5_0058 conserved hypothetical protein 64087 65703 -1
CDS - ACV96365.1 ICEVCHIND5_0059 IstB domain protein ATP-binding protein 65783 66538 -1
CDS - ACV96351.1 ICEVCHIND5_0060 integrase, catalytic region 66528 68036 -1
CDS - ACV96400.1 ICEVCHIND5_0061 SMC domain protein 68135 69178 -1
CDS - ACV96406.1 ICEVCHIND5_0062 endonuclease-1 (Endonuclease I) (Endo I) 69382 70065 -1
CDS - ACV96362.1 ICEVCHIND5_0063 conserved hypothetical protein 70174 70776 -1
CDS - ACV96338.1 ICEVCHIND5_0064 conserved hypothetical protein 71144 71470 1
CDS - ACV96401.1 ICEVCHIND5_0065 single-strand binding protein family 71486 71905 1
CDS - ACV96383.1 ICEVCHIND5_0066 phage recombination protein Bet 71985 72803 1
CDS - ACV96367.1 ICEVCHIND5_0067 hypothetical protein 72885 73028 1
CDS - ACV96321.1 ICEVCHIND5_0068 YqaJ viral recombinase family 73089 74105 1
CDS - ACV96333.1 ICEVCHIND5_0070 ATPase associated with various cellular activities, AAA_5 74198 75274 1
CDS - ACV96350.1 ICEVCHIND5_0069 hypothetical protein 74294 74416 -1
CDS - ACV96361.1 ICEVCHIND5_0071 conserved hypothetical protein 75274 76041 1
CDS - ACV96388.1 ICEVCHIND5_0072 conserved hypothetical protein 76140 77093 1
CDS - ACV96355.1 ICEVCHIND5_0073 conserved hypothetical protein 77155 77595 1
CDS - ACV96370.1 ICEVCHIND5_0074 von Willebrand factor, type A 77665 79320 1
CDS radC ACV96346.1 ICEVCHIND5_0075 DNA repair protein RadC 79405 79902 1
CDS - ACV96369.1 ICEVCHIND5_0076 conserved hypothetical protein 79902 80243 1
CDS - ACV96328.1 ICEVCHIND5_0077 phage P4 alpha, zinc-binding domain protein 80334 81407 1
CDS - ACV96384.1 ICEVCHIND5_0078 conserved hypothetical protein 81497 82204 1
CDS - ACV96407.1 ICEVCHIND5_0079 hypothetical protein 82397 82510 -1
CDS - ACV96378.1 ICEVCHIND5_0081 glyoxalase/bleomycin resistance protein/dioxygenase 82476 82880 1
CDS - ACV96375.1 ICEVCHIND5_0080 conserved hypothetical protein 82877 83578 -1
CDS - ACV96382.1 ICEVCHIND5_0082 conserved hypothetical protein 83678 84040 -1
CDS - ACV96390.1 ICEVCHIND5_0083 membrane associated protein containing xre-family DNA-binding HTH domain 84111 84521 -1
CDS - ACV96377.1 ICEVCHIND5_0084 conserved hypothetical protein 84719 85144 -1
CDS folA ACV96402.1 ICEVCHIND5_0085 dihydrofolate reductase 85249 85722 -1
CDS - ACV96397.1 ICEVCHIND5_0086 hypothetical protein 86940 87080 -1
CDS - ACV96337.1 ICEVCHIND5_0088 conserved hypothetical protein 87226 88170 1
CDS - ACV96392.1 ICEVCHIND5_0089 sex pilus assembly 88173 89561 1
CDS - ACV96408.1 ICEVCHIND5_0090 sex pilus assembly 89565 93134 1
CDS - ACV96329.1 ICEVCHIND5_0091 EexR1 93167 93598 -1
CDS - ACV96379.1 ICEVCHIND5_0092 transcriptional activator 93656 94189 -1
CDS - ACV96364.1 ICEVCHIND5_0093 SetD 94186 94485 -1
CDS - ACV96317.1 ICEVCHIND5_0094 lytic transglycosylase, catalytic 94482 95030 -1
CDS - ACV96357.1 ICEVCHIND5_0095 conserved hypothetical protein 95017 95679 -1
CDS - ACV96387.1 ICEVCHIND5_0096 conserved hypothetical protein 95666 96535 -1
CDS - ACV96330.1 ICEVCHIND5_0097 SetQ 96591 96842 -1
CDS - ACV96412.1 ICEVCHIND5_0098 HTH-type transcriptional regulator for conjugative element R391 96960 97607 1