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Vibrio cholerae NCTC 8457, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_01969378.1 A5C_A0097 ATP-dependent transcriptional regulator 402 1136 1
CDS - ZP_01969395.1 A5C_A0096 hypothetical protein 1133 1888 1
CDS - ZP_01969344.1 A5C_A0095 GGDEF family protein 1869 3449 1
CDS - ZP_01969427.1 A5C_A0094 conserved hypothetical protein 3584 3973 1
CDS - ZP_01969410.1 A5C_A0093 conserved hypothetical protein 3973 5103 1
CDS - ZP_01969384.1 A5C_A0092 tricorn protease 5298 8552 -1
CDS - ZP_01969396.1 A5C_A0091 conserved hypothetical protein 8785 9069 -1
CDS - ZP_01969353.1 A5C_A0090 hypothetical protein 9201 9959 1
CDS glts ZP_01969361.1 A5C_A0089 sodium/glutamate symporter 10038 11264 -1
CDS - ZP_01969430.1 A5C_A0088 hypothetical protein 11461 11577 -1
CDS - ZP_01969381.1 A5C_A0087 hypothetical protein 11571 11708 -1
CDS - ZP_01969402.1 A5C_A0086 conserved hypothetical protein 11802 12728 1
CDS - ZP_01969371.1 A5C_A0085 hypothetical protein 12927 13349 1
CDS - ZP_01969349.1 A5C_A0084 SCO1/SenC family protein 13346 13927 1
CDS - ZP_01969368.1 A5C_A0083 conserved hypothetical protein 13941 14393 1
CDS - ZP_01969392.1 A5C_A0082 sodium/dicarboxylate symporter 14734 15951 1
CDS - ZP_01969429.1 A5C_A0081 phosphatidylglycerophosphatase B, putative 16005 16829 -1
CDS - ZP_01969350.1 A5C_A0080 conserved hypothetical protein 16945 17817 1
CDS - ZP_01969379.1 A5C_A0079 hypothetical protein 17877 19751 -1
CDS - ZP_01969375.1 A5C_A0078 hypothetical protein 20160 20720 1
CDS - ZP_01969426.1 A5C_A0077 methyl-accepting chemotaxis protein 20818 22383 1
CDS - ZP_01969414.1 A5C_A0076 hypothetical protein 22504 23346 -1
CDS - ZP_01969390.1 A5C_A0075 transcriptional regulator, putative 23347 24081 -1
CDS chiA-2 ZP_01969374.1 A5C_A0074 chitinase 24447 26993 -1
CDS - ZP_01969376.1 A5C_A0073 conserved hypothetical protein 27425 28060 1
CDS - ZP_01969358.1 A5C_A0072 transporter, NadC family 28156 29544 -1
CDS - ZP_01969386.1 A5C_A0071 membrane protein, putative 29822 30814 1
CDS - ZP_01969399.1 A5C_A0070 fucose 4-O-acetylase 30945 31487 1
CDS - ZP_01969372.1 A5C_A0069 hypothetical protein 31795 32523 -1
CDS - ZP_01969408.1 A5C_A0068 hypothetical protein 32524 35781 -1
CDS - ZP_01969418.1 A5C_A0067 hypothetical protein 35778 36665 -1
CDS vgrG-2 ZP_01969394.1 A5C_A0066 vgrG protein 36665 38749 -1
CDS hcp-2 ZP_01969341.1 A5C_A0065 hcp protein 38877 39395 -1
CDS glgB ZP_01969354.1 A5C_A0064 1,4-alpha-glucan branching enzyme 39790 41979 -1
CDS malQ ZP_01969365.1 A5C_A0063 4-alpha-glucanotransferase 42185 44365 -1
CDS malP ZP_01969357.1 A5C_A0062 maltodextrin phosphorylase 44451 46904 -1
CDS malT ZP_01969415.1 A5C_A0061 malT regulatory protein 47424 50189 1
CDS - ZP_01969387.1 A5C_A0060 conserved hypothetical protein 50255 50692 -1
CDS - ZP_01969342.1 A5C_A0059 methyl-accepting chemotaxis protein 50891 52552 1
CDS garR ZP_01969346.1 A5C_A0058 2-hydroxy-3-oxopropionate reductase 52656 53603 -1
CDS - ZP_01969356.1 A5C_A0057 conserved hypothetical protein 53646 54365 -1
CDS - ZP_01969347.1 A5C_A0056 hypothetical protein 54453 54731 -1
CDS - ZP_01969424.1 A5C_A0055 hypothetical protein 54825 55022 -1
CDS - ZP_01969360.1 A5C_A0054 hypothetical protein 55232 55846 1
CDS - ZP_01969407.1 A5C_A0053 hypothetical protein 56066 58042 -1
CDS - ZP_01969345.1 A5C_A0052 hypothetical protein 58930 59064 1
CDS - ZP_01969393.1 A5C_A0051 ParA family protein 59271 60494 1
CDS - ZP_01969433.1 A5C_A0050 ParB family protein 60502 61473 1
CDS - ZP_01969355.1 A5C_A0049 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein 61533 62564 -1
CDS - ZP_01969340.1 A5C_A0048 conserved hypothetical protein 62692 64818 1
CDS - ZP_01969421.1 A5C_A0047 thermostable hemolysin 64992 65594 1
CDS - ZP_01969383.1 A5C_A0046 long-chain-fatty-acid--CoA ligase, putative 65605 67128 1
CDS - ZP_01969366.1 A5C_A0045 hypothetical protein 67144 67854 1
CDS - ZP_01969362.1 A5C_A0044 oxidoreductase, short-chain dehydrogenase/reductase family 67864 68661 1
CDS - ZP_01969338.1 A5C_A0043 hypothetical protein 69040 69321 1
CDS - ZP_01969397.1 A5C_A0042 DNA-binding response regulator 69326 69982 1
CDS - ZP_01969409.1 A5C_A0041 sensor histidine kinase 69972 71387 1
CDS - ZP_01969406.1 A5C_A0040 conserved hypothetical protein 71539 73191 -1
CDS - ZP_01969388.1 A5C_A0039 ABC transporter, ATP-binding protein 73446 74906 -1
CDS - ZP_01969412.1 A5C_A0038 ABC transporter, permease protein 74825 75637 -1
CDS - ZP_01969423.1 A5C_A0037 ABC transporter, permease protein 75618 76574 -1
CDS - ZP_01969369.1 A5C_A0036 ABC transporter, periplasmic substrate-binding protein 76567 78132 -1
CDS - ZP_01969422.1 A5C_A0035 conserved hypothetical protein 78330 78635 1
CDS cheY-4 ZP_01969419.1 A5C_A0034 chemotaxis protein CheY 78646 79005 1
CDS cheA-3 ZP_01969364.1 A5C_A0033 chemotaxis protein CheA 79054 81216 1
CDS cheW-3 ZP_01969367.1 A5C_A0032 purine-binding chemotaxis protein CheW 81225 81752 1
CDS cheW-2 ZP_01969359.1 A5C_A0031 purine-binding chemotaxis protein CheW 81749 82210 1
CDS - ZP_01969391.1 A5C_A0030 methyl-accepting chemotaxis protein 82224 84260 1
CDS cheR-3 ZP_01969398.1 A5C_A0029 chemotaxis protein methyltransferase CheR 84275 85105 1
CDS - ZP_01969425.1 A5C_A0028 chemotaxis protein CheD, putative 85044 85745 1
CDS cheB-3 ZP_01969417.1 A5C_A0027 protein-glutamate methylesterase CheB 85742 86782 1
CDS - ZP_01969373.1 A5C_A0026 methyl-accepting chemotaxis protein 86825 87979 1
CDS - ZP_01969377.1 A5C_A0025 anti-sigma F factor antagonist, putative 87989 88288 1
CDS - ZP_01969363.1 A5C_A0024 response regulator 88312 90018 1
CDS - ZP_01969404.1 A5C_A0023 conserved hypothetical protein 90277 91947 1
CDS - ZP_01969431.1 A5C_A0022 toxin secretion ATP-binding protein 92082 94196 -1
CDS - ZP_01969348.1 A5C_A0021 hypothetical protein 94211 96121 -1
CDS - ZP_01969416.1 A5C_A0020 hypothetical protein 96127 96789 -1
CDS - ZP_01969343.1 A5C_A0019 secretion protein, HlyD family 96798 98243 -1
CDS pdxH ZP_01969420.1 A5C_A0018 pyridoxamine 5`-phosphate oxidase 98413 99048 1
CDS - ZP_01969403.1 A5C_A0017 transcriptional regulator, LuxR family 99077 100036 -1
CDS - ZP_01969382.1 A5C_A0016 conserved hypothetical protein 100136 101953 -1
CDS - ZP_01969432.1 A5C_A0015 hypothetical protein 101856 101981 1
CDS - ZP_01969411.1 A5C_A0014 hypothetical protein 102021 102146 -1
CDS - ZP_01969370.1 A5C_A0013 hypothetical protein 102113 103252 -1
CDS - ZP_01969339.1 A5C_A0012 transcriptional regulator, AraC/XylS family 103611 104474 1
CDS putA ZP_01969413.1 A5C_A0011 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase 104814 107933 1
CDS putP ZP_01969405.1 A5C_A0009 sodium/proline symporter 108726 110216 1
CDS - ZP_01969389.1 A5C_A0008 hypothetical protein 110400 110621 1
CDS - ZP_01969352.1 A5C_A0007 methyl-accepting chemotaxis protein 110951 112870 1
CDS - ZP_01969401.1 A5C_A0006 transcriptional regulator, AsnC family 113068 113550 1
CDS - ZP_01969380.1 A5C_A0005 aldehyde dehydrogenase 113723 115165 1
CDS - ZP_01969351.1 A5C_A0004 conserved hypothetical protein 115686 115808 1
CDS - ZP_01969428.1 A5C_A0003 hypothetical protein 115885 116007 -1
CDS speF ZP_01969385.1 A5C_A0002 ornithine decarboxylase, inducible 116148 118310 1
CDS potE ZP_01969400.1 A5C_A0001 putrescine-ornithine antiporter 118378 119697 1