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Vibrio cholerae NCTC 8457, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - A5C_2253 tRNA-Leu 56 141 1
tRNA - - A5C_2254 tRNA-Gln 159 233 1
tRNA - - A5C_2255 tRNA-Leu 275 359 1
tRNA - - A5C_2256 tRNA-Gln 386 460 1
tRNA - - A5C_2257 tRNA-Leu 502 586 1
tRNA - - A5C_2258 tRNA-Met 612 688 1
tRNA - - A5C_2259 tRNA-Leu 711 796 1
tRNA - - A5C_2260 tRNA-Gln 814 888 1
tRNA - - A5C_2261 tRNA-Leu 932 1016 1
tRNA - - A5C_2262 tRNA-Gln 1055 1129 1
tRNA - - A5C_2263 tRNA-Leu 1171 1255 1
CDS - ZP_01969740.1 A5C_2265 hypothetical protein 1416 1547 1
CDS flaC ZP_01969767.1 A5C_2264 flagellin FlaC 1539 2672 -1
CDS flaA ZP_01969786.1 A5C_2266 flagellin core protein A 3227 4366 -1
CDS - ZP_01969747.1 A5C_2267 hypothetical protein 4515 4694 -1
CDS flgL ZP_01969732.1 A5C_2268 flagellar hook-associated protein FlgL 4774 5967 -1
CDS flgK ZP_01969781.1 A5C_2269 flagellar hook-associated protein FlgK 5980 7854 -1
CDS flgJ ZP_01969755.1 A5C_2270 flagellar protein FlgJ 8034 8972 -1
CDS flgI ZP_01969757.1 A5C_2271 flagellar P-ring protein FlgI 8983 10068 -1
CDS flgH ZP_01969783.1 A5C_2272 flagellar L-ring protein FlgH 10159 10944 -1
CDS flgG ZP_01969762.1 A5C_2273 flagellar basal-body rod protein FlgG 10959 11747 -1
CDS flgF ZP_01969787.1 A5C_2274 flagellar basal-body rod protein FlgF 11767 12516 -1
CDS flgE ZP_01969774.1 A5C_2275 flagellar hook protein FlgE 12699 14003 -1
CDS flgD ZP_01969734.1 A5C_2276 basal-body rod modification protein FlgD 14032 14739 -1
CDS flgC ZP_01969737.1 A5C_2277 flagellar basal-body rod protein FlgC 14757 15173 -1
CDS flgB ZP_01969748.1 A5C_2278 flagellar basal-body rod protein FlgB 15178 15573 -1
CDS cheR-2 ZP_01969733.1 A5C_2279 chemotaxis protein methyltransferase CheR 15793 16620 -1
CDS cheV-3 ZP_01969752.1 A5C_2280 chemotaxis protein CheV 16631 17557 -1
CDS - ZP_01969788.1 A5C_2281 flagellar protein, putative 17614 18381 1
CDS flgM ZP_01969765.1 A5C_2282 negative regulator of flagellin synthesis FlgM 18512 18835 1
CDS - ZP_01969751.1 A5C_2283 hypothetical protein 18933 19364 1
CDS - ZP_01969742.1 A5C_2284 lipoprotein, putative 19474 19911 -1
CDS - ZP_01969773.1 A5C_2285 lipoprotein, putative 19919 20587 -1
CDS - ZP_01969754.1 A5C_2286 hypothetical protein 20715 21848 1
CDS vibF ZP_01969763.1 A5C_2287 nonribosomal peptide synthetase VibF 21978 29231 -1
CDS viuB ZP_01969770.1 A5C_2288 vibriobactin utilization protein ViuB 29477 30292 -1
CDS viuA ZP_01969782.1 A5C_2289 ferric vibriobactin receptor 30596 32659 -1
CDS - ZP_01969777.1 A5C_2290 hypothetical protein 33079 33777 1
CDS ompA ZP_01969743.1 A5C_2291 outer membrane protein OmpA 33866 34831 -1
CDS gltX ZP_01969766.1 A5C_2292 glutamyl-tRNA synthetase 35127 36656 -1
CDS - ZP_01969753.1 A5C_2293 cation transport ATPase, E1-E2 family 36725 39472 1
CDS - ZP_01969756.1 A5C_2294 conserved hypothetical protein 39469 39921 1
CDS chb-2 ZP_01969791.1 A5C_2295 beta-N-acetylhexosaminidase 40058 42709 -1
CDS - ZP_01969771.1 A5C_2296 hypothetical protein 42742 42855 1
CDS - ZP_01969736.1 A5C_2297 conserved hypothetical protein 43126 44022 1
tRNA - - A5C_2298 tRNA-Pro 44197 44273 -1
CDS - ZP_01969739.1 A5C_2299 hypothetical protein 44503 44643 1
CDS - ZP_01969759.1 A5C_2300 conserved hypothetical protein 44825 45403 1
CDS - ZP_01969769.1 A5C_2301 pseudouridine synthase family 1 protein 45433 46455 1
CDS - ZP_01969749.1 A5C_2302 GGDEF family protein 46553 48091 -1
CDS upp ZP_01969776.1 A5C_2303 uracil phosphoribosyltransferase 48322 48948 -1
CDS purM ZP_01969768.1 A5C_2304 phosphoribosylformylglycinamidine cyclo-ligase 49115 50155 1
CDS purN ZP_01969772.1 A5C_2305 phosphoribosylglycinamide formyltransferase 50158 50796 1
CDS - ZP_01969745.1 A5C_2306 conserved hypothetical protein 50937 51782 -1
CDS lpcA ZP_01969764.1 A5C_2307 phosphoheptose isomerase 51845 52420 -1
CDS - ZP_01969779.1 A5C_2308 oxidoreductase, acyl-CoA dehydrogenase family 52738 55182 1
CDS - ZP_01969758.1 A5C_2309 hypothetical protein 55329 56588 -1
CDS dnaQ ZP_01969750.1 A5C_2310 DNA polymerase III, epsilon subunit 56597 57340 -1
CDS rnhA ZP_01969785.1 A5C_2311 ribonuclease HI 57397 57867 1
CDS - ZP_01969761.1 A5C_2312 conserved hypothetical protein 57938 58675 -1
CDS - ZP_01969780.1 A5C_2313 hydroxyacylglutathione hydrolase GloB, putative 58713 59471 1
CDS mltD ZP_01969790.1 A5C_2314 membrane-bound lytic murein transglycosylase D 59543 61141 1
CDS - ZP_01969744.1 A5C_2315 conserved hypothetical protein 61158 62003 -1
CDS glnB-2 ZP_01969784.1 A5C_2316 nitrogen regulatory protein P-II 62071 62415 -1
CDS - ZP_01969778.1 A5C_2317 decarboxylase 62569 63093 -1
CDS - ZP_01969775.1 A5C_2318 cytochrome c554 63470 63793 -1
CDS tilS ZP_01969741.1 A5C_2319 tRNA(Ile)-lysidine synthetase 63829 65151 -1
CDS accA ZP_01969760.1 A5C_2320 acetyl-CoA carboxylase, carboxyl transferase alpha subunit 65291 66250 -1
CDS dnaE ZP_01969738.1 A5C_2321 DNA polymerase III, alpha subunit 66305 69799 -1
CDS rnhB ZP_01969731.1 A5C_2322 ribonuclease HII 69823 70443 -1
CDS lpxB ZP_01969789.1 A5C_2323 lipid-A-disaccharide synthase 70468 71607 -1
CDS lpxA ZP_01969735.1 A5C_2324 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 71768 72556 -1
CDS fabZ ZP_01969746.1 A5C_2325 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase 72558 73019 -1