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Vibrio cholerae NCTC 8457, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS rodA ZP_01969863.1 A5C_0962 rod shape-determining protein RodA 51 1028 1
CDS - ZP_01969851.1 A5C_0961 rare lipoprotein A, putative 1028 1819 1
CDS dacA-1 ZP_01969874.1 A5C_0960 D-alanyl-D-alanine carboxypeptidase 1911 3086 1
CDS - ZP_01969896.1 A5C_0959 hypothetical protein 3092 3235 -1
CDS - ZP_01969880.1 A5C_0958 conserved hypothetical protein 3234 3512 1
CDS lipB ZP_01969887.1 A5C_0957 lipoate-protein ligase B 3691 4350 1
CDS lipA ZP_01969888.1 A5C_0956 lipoic acid synthetase 4343 5308 1
CDS - ZP_01969897.1 A5C_0955 lipoprotein, putative 5476 5829 1
CDS glyA-1 ZP_01969859.1 A5C_0954 serine hydroxymethyltransferase 5994 7301 -1
CDS - ZP_01969893.1 A5C_0953 conserved hypothetical protein 7585 8181 1
CDS - ZP_01969891.1 A5C_0952 hypothetical protein 8337 8771 -1
CDS - ZP_01969854.1 A5C_0951 hypothetical protein 8750 9457 -1
CDS - ZP_01969861.1 A5C_0950 exopolysaccharide biosynthesis protein, putative 9454 11667 -1
CDS - ZP_01969883.1 A5C_0949 hypothetical protein 11692 12219 -1
CDS - ZP_01969857.1 A5C_0948 hypothetical protein 12223 13419 -1
CDS - ZP_01969899.1 A5C_0947 capsular polysaccharide biosynthesis glycosyltransferase, putative 13490 14887 -1
CDS - ZP_01969889.1 A5C_0946 hypothetical protein 15377 15982 1
CDS - ZP_01969875.1 A5C_0945 conserved hypothetical protein 16158 17474 1
CDS - ZP_01969903.1 A5C_0944 hypothetical protein 17629 20502 -1
CDS - ZP_01969858.1 A5C_0943 hypothetical protein 20766 21992 1
CDS - ZP_01969872.1 A5C_0942 hypothetical protein 22198 23013 -1
CDS cpsF ZP_01969904.1 A5C_0941 UDP-N-acetyl-D-mannosamine transferase 23209 23961 -1
CDS - ZP_01969865.1 A5C_0940 hypothetical protein 23951 25084 -1
CDS - ZP_01969866.1 A5C_0939 polysaccharide biosynthesis protein, putative 25120 26217 -1
CDS - ZP_01969898.1 A5C_0938 capK protein, putative 26193 27533 -1
CDS - ZP_01969895.1 A5C_0937 bacterial transferase hexapeptide domain protein 27533 27964 -1
CDS - ZP_01969894.1 A5C_0936 hypothetical protein 27975 29195 -1
CDS - ZP_01969890.1 A5C_0935 polysaccharide export protein, putative 29192 30601 -1
CDS - ZP_01969901.1 A5C_0934 exopolysaccharide biosynthesis protein EpsF, putative 30598 31746 -1
CDS - ZP_01969852.1 A5C_0933 bacterial transferase hexapeptide domain protein 31743 32297 -1
CDS epsD ZP_01969882.1 A5C_0932 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase 32294 33535 -1
CDS wecB ZP_01969884.1 A5C_0931 UDP-N-acetylglucosamine 2-epimerase 33555 34673 -1
CDS - ZP_01969906.1 A5C_0930 phosphotyrosine protein phosphatase 34986 35486 -1
CDS - ZP_01969870.1 A5C_0929 multidrug resistance protein, putative 35913 39023 -1
CDS - ZP_01969902.1 A5C_0928 conserved hypothetical protein 39023 40081 -1
tRNA - - A5C_0927 tRNA-Tyr 40367 40451 1
tRNA - - A5C_0926 tRNA-Tyr 40537 40621 1
tRNA - - A5C_0925 tRNA-Tyr 40706 40790 1
tRNA - - A5C_0924 tRNA-Tyr 40875 40959 1
CDS treC ZP_01969871.1 A5C_0923 trehalose-6-phosphate hydrolase 41138 42826 -1
CDS treB ZP_01969868.1 A5C_0922 PTS system, trehalose-specific IIBC component 42906 44342 -1
CDS treR ZP_01969878.1 A5C_0921 trehalose operon repressor 44579 45529 -1
CDS - ZP_01969855.1 A5C_0920 histidinol phosphatase-related protein 45594 46154 -1
CDS - ZP_01969892.1 A5C_0919 ABC transporter, ATP-binding protein 46390 47424 1
CDS - ZP_01969856.1 A5C_0918 ABC transporter, permease protein 47414 48091 1
CDS yaeC ZP_01969853.1 A5C_0917 lipoprotein YaeC 48110 48937 1
CDS - ZP_01969867.1 A5C_0916 conserved hypothetical protein 49070 49846 -1
CDS syd ZP_01969876.1 A5C_0915 syd protein 49848 50444 -1
CDS - ZP_01969881.1 A5C_0914 conserved hypothetical protein 50475 51338 1
CDS - ZP_01969886.1 A5C_0913 hypothetical protein 51353 53614 1
CDS - ZP_01969885.1 A5C_0912 GGDEF family protein 53716 55290 1
CDS - ZP_01969873.1 A5C_0911 conserved hypothetical protein 55495 56868 1
CDS xni ZP_01969860.1 A5C_0910 exodeoxyribonuclease IX 56907 57758 1
CDS - ZP_01969869.1 A5C_0909 conserved hypothetical protein 57789 58175 -1
CDS - ZP_01969850.1 A5C_0908 transcriptional regulator, LysR family 58197 59117 -1
CDS thiI ZP_01969864.1 A5C_0907 thiamin biosynthesis protein ThiI 59738 61285 -1
CDS pomB ZP_01969879.1 A5C_0906 chemotaxis protein PomB 61493 62449 -1
CDS pomA ZP_01969877.1 A5C_0905 chemotaxis protein PomA 62461 63225 -1
CDS xseB ZP_01969862.1 A5C_0904 exodeoxyribonuclease VII, small subunit 63540 63782 1
CDS ispA ZP_01969900.1 A5C_0903 geranyltranstransferase 63824 64708 1
CDS dxs ZP_01969905.1 A5C_0902 1-deoxyxylulose-5-phosphate synthase 64728 65172 1