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Vibrio cholerae O1 biovar El Tor str. N16961 chromosome I, complete genome. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - NP_062585.1 VC0001 hypothetical protein 235 402 -1
CDS - NP_062586.1 VC0002 flavodoxin 372 806 -1
CDS trmE NP_062587.1 VC0003 tRNA modification GTPase TrmE 816 2210 -1
CDS - NP_062588.1 VC0004 putative inner membrane protein translocase component YidC 2271 3896 -1
CDS - NP_062589.1 VC0005 hypothetical protein 3899 4156 -1
CDS rnpA NP_062590.1 VC0006 ribonuclease P 4123 4479 -1
CDS rpmH NP_062591.1 VC0007 50S ribosomal protein L34 4492 4629 -1
CDS - NP_062592.1 VC0008 amino acid ABC transporter, ATP-binding protein 4871 5608 -1
CDS - NP_062593.1 VC0009 amino acid ABC transproter, permease protein 5605 6276 -1
CDS - NP_062594.1 VC0010 amino acid ABC transporter, periplasmic amino acid-binding portion 6354 7100 -1
CDS - NP_062595.1 VC0011 hypothetical protein 7224 7352 1
CDS dnaA NP_062596.1 VC0012 chromosomal replication initiation protein 7397 8815 1
CDS - NP_062597.1 VC0013 DNA polymerase III subunit beta 8873 9973 1
CDS recF NP_062598.1 VC0014 recombination protein F 9991 11082 1
CDS gyrB NP_062599.1 VC0015 DNA gyrase subunit B 11103 13520 1
CDS - NP_229675.1 VC0016 hypothetical protein 13876 14367 1
CDS - NP_229676.1 VC0017 hypothetical protein 14377 14493 1
CDS - NP_229677.1 VC0018 16 kDa heat shock protein A 14769 15206 1
CDS avtA NP_229678.1 VC0019 valine--pyruvate transaminase 15294 16550 -1
CDS glyS NP_229679.1 VC0020 glycyl-tRNA synthetase subunit beta 16869 18935 -1
CDS glyQ NP_229680.1 VC0021 glycyl-tRNA synthetase subunit alpha 18950 19942 -1
CDS - NP_229681.1 VC0022 hypothetical protein 20235 20837 1
CDS - NP_229682.1 VC0023 NADH dehydrogenase subunit II-related protein 20943 21200 1
CDS - NP_229683.1 VC0024 sulfur transfer protein SirA 21287 21535 -1
CDS - NP_229684.1 VC0025 hypothetical protein 21656 21856 1
CDS - NP_229685.1 VC0026 zinc-binding alcohol dehydrogenase 22028 23008 -1
CDS - NP_229686.1 VC0027 threonine dehydratase 23256 24788 -1
CDS - NP_229687.1 VC0028 dihydroxy-acid dehydratase 24792 26633 -1
CDS - NP_229688.1 VC0029 branched-chain amino acid aminotransferase 26643 27602 -1
CDS ilvM NP_229689.1 VC0030 acetolactate synthase 2 regulatory subunit 27593 27877 -1
CDS - NP_229690.1 VC0031 acetolactate synthase 2 catalytic subunit 27889 29535 -1
CDS - NP_229691.1 VC0032 ComM-related protein 30069 31592 1
CDS - NP_229692.1 VC0033 putative acyltransferase 31682 32566 1
CDS - NP_229693.1 VC0034 thiol:disulfide interchange protein 32644 33246 -1
CDS - NP_229694.2 VC0035 serine/threonine protein kinase 33277 34263 -1
CDS - NP_229695.1 VC0036 FixG-related protein 34311 35798 -1
CDS - NP_229696.1 VC0037 hypothetical protein 36152 36430 -1
CDS - NP_229697.1 VC0038 hypothetical protein 36527 36694 -1
CDS - NP_229698.1 VC0039 SpoOM-related protein 36928 37770 1
CDS - NP_229699.1 VC0040 hemolysin, putative 37848 38495 1
CDS - NP_229700.1 VC0041 hypothetical protein 38534 39190 -1
CDS - NP_229701.1 VC0042 potassium uptake protein TrkH 39103 40548 -1
CDS trkA NP_229702.1 VC0043 potassium transporter peripheral membrane component 40560 41936 -1
CDS - NP_229703.1 VC0044 sun protein 41998 43302 -1
CDS fmt NP_229704.1 VC0045 methionyl-tRNA formyltransferase 43334 44281 -1
CDS def NP_229705.1 VC0046 peptide deformylase 44299 44808 -1
CDS - NP_229706.1 VC0047 hypothetical protein 44900 46075 1
CDS - NP_229707.1 VC0048 smf protein 46075 47190 1
CDS - NP_229708.1 VC0049 hypothetical protein 47193 47669 1
CDS - NP_229709.1 VC0050 DNA topoisomerase I-related protein 47679 48251 1
CDS - NP_229710.1 VC0051 phosphoribosylaminoimidazole carboxylase ATPase subunit 48324 49457 -1
CDS - NP_229711.1 VC0052 phosphoribosylaminoimidazole carboxylase catalytic subunit 49461 49946 -1
CDS - NP_229712.1 VC0053 hypothetical protein 49961 50086 1
CDS - NP_229713.1 VC0054 Sua5/YciO/YrdC family protein 50104 50670 1
CDS - NP_229714.1 VC0055 coproporphyrinogen III oxidase 50689 51606 1
CDS aroE NP_229715.1 VC0056 shikimate 5-dehydrogenase 51668 52504 1
CDS - NP_229716.1 VC0057 hypothetical protein 52501 52776 1
CDS - NP_229717.1 VC0058 carbonic anhydrase 52757 53311 -1
CDS - NP_229718.1 VC0059 hypothetical protein 53497 53637 1
rRNA 16Sa - VCr001 16S ribosomal RNA 53823 55357 1
tRNA tRNA-Ala-5 - VCt001 tRNA-Ala 55421 55496 1
rRNA 23Sa - VCr002 23S ribosomal RNA 55784 58670 1
rRNA 5Sa - VCr003 5S ribosomal RNA 58798 58915 1
tRNA tRNA-Asp-4 - VCt002 tRNA-Asp 58941 59017 1
tRNA tRNA-Trp-1 - VCt003 tRNA-Trp 59047 59123 1
CDS ccrB NP_229719.1 VC0060 camphor resistance protein CrcB 59356 59736 1
CDS - NP_229720.1 VC0061 thiamine biosynthesis protein ThiC 59988 61925 1
CDS thiE NP_229721.1 VC0062 thiamine-phosphate pyrophosphorylase 61929 63251 1
CDS - NP_229722.1 VC0063 thiF protein 63238 64014 1
CDS - NP_229723.1 VC0064 sulfur carrier protein ThiS 63957 64214 1
CDS thiG NP_229724.1 VC0065 thiazole synthase 64220 64990 1
CDS thiH NP_229725.1 VC0066 thiamine biosynthesis protein ThiH 64987 66099 1
CDS - NP_229726.1 VC0067 aminopeptidase P 66324 68117 -1
CDS - NP_229727.1 VC0068 LysR family transcriptional regulator 68250 69233 -1
CDS - NP_229728.1 VC0069 multidrug resistance protein, putative 69296 70498 1
CDS - NP_229729.1 VC0070 hypothetical protein 70602 70886 1
CDS - NP_229730.1 VC0071 DNA-binding transcriptional regulator AsnC 70975 71436 -1
CDS - NP_229731.1 VC0072 sensory box/GGDEF family protein 71512 73818 1
CDS - NP_229732.1 VC0073 hypothetical protein 73785 74663 1
CDS - NP_229733.1 VC0074 hypothetical protein 74781 75170 1
CDS - NP_229734.1 VC0075 MadN protein 75266 76153 -1
CDS - NP_229735.1 VC0076 universal stress protein A 76210 76635 -1
CDS - NP_229736.1 VC0077 hypothetical protein 76681 76776 1
CDS - NP_229737.1 VC0078 ferritin 76782 77327 1
CDS - NP_229738.1 VC0079 universal stress protein UspB 77403 77726 1
CDS - NP_229739.1 VC0080 hypothetical protein 77859 79055 1
CDS - NP_229740.1 VC0081 hypothetical protein 79052 79963 -1
CDS - NP_229741.1 VC0082 hypothetical protein 80077 81618 1
CDS ubiE NP_229742.1 VC0083 ubiquinone/menaquinone biosynthesis methyltransferase 81663 82445 1
CDS - NP_229743.1 VC0084 hypothetical protein 82454 83077 1
CDS ubiB NP_229744.1 VC0085 putative ubiquinone biosynthesis protein UbiB 83074 84708 1
CDS tatA NP_229745.1 VC0086 twin arginine translocase protein A 84768 85016 1
CDS - NP_229746.1 VC0087 sec-independent translocase 85020 85421 1
CDS - NP_229747.1 VC0088 hypothetical protein 85510 86262 1
CDS - NP_229748.1 VC0089 cytochrome c551 peroxidase 86574 87575 1
CDS - NP_229749.1 VC0090 DNA-damage-inducible protein F 87681 89045 -1
CDS - NP_229750.1 VC0091 O-methyltransferase-related protein 89116 89985 -1
CDS - NP_229751.1 VC0092 LexA repressor 90013 90642 -1
CDS - NP_229752.2 VC0093 glycerol-3-phosphate acyltransferase 90962 93388 1
CDS ubiA NP_229753.1 VC0094 4-hydroxybenzoate octaprenyltransferase 93464 94318 -1