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Vibrio cholerae TM 11079-80, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - VIF_rna040 tRNA-Asn 86 161 1
CDS - ZP_04409412.1 VIF_000498 hypothetical protein 316 1170 -1
CDS - ZP_04409413.1 VIF_000499 Imp required for envelope biogenesis/organic solvent tolerance protein precursor 1317 3680 1
CDS - ZP_04409414.1 VIF_000500 peptidyl-prolyl cis-trans isomerase SurA 3733 5028 1
CDS - ZP_04409415.1 VIF_000501 4-hydroxythreonine-4-phosphate dehydrogenase 5018 6010 1
CDS - ZP_04409416.1 VIF_000502 dimethyladenosine transferase 6024 6839 1
CDS - ZP_04409417.1 VIF_000503 ApaG protein 6911 7291 1
CDS - ZP_04409418.1 VIF_000504 bis(5'-nucleosyl)-tetraphosphatase symmetrical 7302 8111 1
CDS - ZP_04409419.1 VIF_000505 dihydrofolate reductase 8261 8758 -1
CDS - ZP_04409420.1 VIF_000506 hypothetical protein 8771 9256 -1
CDS - ZP_04409421.1 VIF_000507 hypothetical protein 9244 10113 -1
CDS - ZP_04409422.1 VIF_000508 GTP-binding protein Obg 10127 11314 -1
CDS - ZP_04409423.1 VIF_000509 LSU ribosomal protein L27p 11515 11775 -1
CDS - ZP_04409424.1 VIF_000510 LSU ribosomal protein L21p 11796 12107 -1
CDS - ZP_04409425.1 VIF_000511 octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferase/ geranylgeranyl pyrophosphate synthetase 12377 13348 1
CDS - ZP_04409426.1 VIF_000512 arginine/ornithine antiporter ArcD 13497 14903 -1
CDS - ZP_04409427.1 VIF_000513 malate dehydrogenase 15377 16312 -1
CDS - ZP_04409428.1 VIF_000514 arginine pathway regulatory protein ArgR repressor of arg regulon 16577 17110 1
CDS - ZP_04409429.1 VIF_000515 TRAP transporter solute receptor TAXI family precursor 17416 18402 1
CDS - ZP_04409430.1 VIF_000516 TRAP-type uncharacterized transport system fused permease component 18573 21137 1
CDS - ZP_04409431.1 VIF_000517 universal stress protein family 3 21259 21696 1
CDS - ZP_04409432.1 VIF_000518 hypothetical protein 21847 22230 1
CDS - ZP_04409433.1 VIF_000519 beta-galactosidase/beta-glucuronidase 22297 23094 -1
CDS - ZP_04409434.1 VIF_000520 hypothetical protein 23241 23663 -1
CDS - ZP_04409435.1 VIF_000521 arginine deiminase 24390 25613 1
CDS - ZP_04409436.1 VIF_000522 NADH oxidoreductase Hcr 25649 26755 -1
CDS - ZP_04409437.1 VIF_000523 hydroxylamine reductase 26756 28417 -1
CDS - ZP_04409438.1 VIF_000524 TldD protein probably a protease 28699 30144 -1
CDS - ZP_04409439.1 VIF_000525 hypothetical protein 30144 30971 -1
CDS - ZP_04409440.1 VIF_000526 hypothetical protein 30980 34819 -1
CDS - ZP_04409441.1 VIF_000527 cytoplasmic axial filament protein CafA and Ribonuclease G 34868 36337 -1
CDS - ZP_04409442.1 VIF_000528 septum formation protein Maf 36363 36938 -1
CDS - ZP_04409443.1 VIF_000529 rod shape-determining protein MreD 36923 37411 -1
CDS - ZP_04409444.1 VIF_000530 rod shape-determining protein MreC 37398 38288 -1
CDS - ZP_04409445.1 VIF_000531 rod shape-determining protein MreB 38345 39388 -1
CDS - ZP_04409446.1 VIF_000534 MSHA biogenesis protein MshP 44203 44706 -1
CDS - ZP_04409447.1 VIF_000535 MSHA biogenesis protein MshO 44672 45451 -1
CDS - ZP_04409448.1 VIF_000536 MSHA pilin protein MshD 45451 46062 -1
CDS - ZP_04409449.1 VIF_000537 MSHA pilin protein MshC 46010 46522 -1
CDS - ZP_04409450.1 VIF_000538 MSHA pilin protein MshA 46583 47068 -1
CDS - ZP_04409451.1 VIF_000539 MSHA pilin protein MshB 47094 47648 -1
CDS - ZP_04409452.1 VIF_000540 MSHA biogenesis protein MshF 47730 48215 -1
CDS - ZP_04409453.1 VIF_000541 MSHA biogenesis protein MshG 48185 49408 -1
CDS - ZP_04409454.1 VIF_000542 MSHA biogenesis protein MshE 49417 51144 -1
CDS - ZP_04409455.1 VIF_000543 MSHA biogenesis protein MshN 51134 52267 -1
CDS - ZP_04409456.1 VIF_000544 MSHA biogenesis protein MshM 52246 53091 -1
CDS - ZP_04409457.1 VIF_000545 MSHA biogenesis protein MshL 53096 54775 -1
CDS - ZP_04409458.1 VIF_000546 MSHA biogenesis protein MshK 54790 55107 -1
CDS - ZP_04409459.1 VIF_000547 MSHA biogenesis protein MshJ 55100 55750 -1
CDS - ZP_04409460.1 VIF_000548 MSHA biogenesis protein MshI 55747 57186 -1
CDS - ZP_04409461.1 VIF_000549 MSHA biogenesis protein MshH 57199 59220 -1
CDS - ZP_04409462.1 VIF_000550 transposase OrfAB subunit A 59890 60234 1
CDS - ZP_04409463.1 VIF_000551 transposase OrfAB subunit B 60366 61103 1
CDS - ZP_04409464.1 VIF_000552 transposase 61566 63098 1
CDS - ZP_04409465.1 VIF_000553 hypothetical protein 63364 63849 1
CDS - ZP_04409466.1 VIF_000554 hypothetical protein 63837 63929 -1
CDS - ZP_04409467.1 VIF_000555 hypothetical protein 63877 64446 -1
CDS - ZP_04409468.1 VIF_000556 hypothetical protein 64865 67108 -1
CDS - ZP_04409469.1 VIF_000557 hypothetical protein 67108 68373 -1
CDS - ZP_04409470.1 VIF_000558 hypothetical protein 68720 70027 -1
CDS - ZP_04409471.1 VIF_000559 single-stranded DNA-binding protein 70160 70711 -1
CDS - ZP_04409472.1 VIF_000560 hypothetical protein 70985 71629 1
CDS - ZP_04409473.1 VIF_000561 UTP--glucose-1-phosphate uridylyltransferase 71799 72674 1
CDS - ZP_04409474.1 VIF_000562 excinuclease ABC subunit A 72830 75652 1
CDS - ZP_04409475.1 VIF_000563 lipid A core-O-antigen ligase 75708 77501 1
CDS - ZP_04409476.1 VIF_000564 serine--pyruvate aminotransferase/L-alanine:glyoxylate aminotransferase 77580 78698 -1
CDS - ZP_04409477.1 VIF_000565 aspartokinase 79162 80517 1
CDS - ZP_04409478.1 VIF_000566 5-methyltetrahydrofolate--homocysteine methyltransferase 80590 84270 -1
CDS - ZP_04409479.1 VIF_000567 hypothetical protein 84467 85801 1
tRNA - - VIF_rna041 tRNA-Asp 86269 86345 -1
rRNA - - VIF_rna042 5S ribosomal RNA 86418 86537 -1
rRNA - - VIF_rna043 23S ribosomal RNA 86666 87225 -1