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Vibrio cholerae TM 11079-80, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04409480.1 VIF_000568 RNA-binding protein 382 840 1
CDS - ZP_04409481.1 VIF_000569 glutamate racemase 806 1603 -1
CDS - ZP_04409482.1 VIF_000570 alkaline serine exoprotease A precursor 1997 3613 1
CDS - ZP_04409483.1 VIF_000571 IS1004 transposase 3695 4132 -1
CDS - ZP_04409484.1 VIF_000572 outer membrane vitamin B12 receptor BtuB 4309 6141 -1
CDS - ZP_04409485.1 VIF_000573 tRNA (uracil-5-)-methyltransferase 6539 7648 1
CDS - ZP_04409486.1 VIF_000574 ATPase of the AAA+ class 7685 8056 -1
CDS - ZP_04409487.1 VIF_000575 unsaturated fatty acid biosythesis repressor FabR 8096 8737 -1
CDS - ZP_04409488.1 VIF_000576 soluble pyridine nucleotide transhydrogenase 9045 10445 1
CDS - ZP_04409489.1 VIF_000577 RNA polymerase sigma factor RpoH 10647 11507 -1
CDS - ZP_04409490.1 VIF_000578 cell division protein FtsX 11677 12678 -1
CDS - ZP_04409491.1 VIF_000579 cell division transporter ATP-binding protein FtsE 12668 13369 -1
CDS - ZP_04409492.1 VIF_000580 signal recognition particle receptor protein FtsY 13391 14578 -1
CDS - ZP_04409493.1 VIF_000581 ribosomal RNA small subunit methyltransferase D 14781 15380 1
CDS - ZP_04409494.1 VIF_000582 hypothetical protein 15377 15643 1
CDS - ZP_04409495.1 VIF_000583 hypothetical protein 16680 17063 1
CDS - ZP_04409496.1 VIF_000584 hypothetical protein 17119 17748 -1
CDS - ZP_04409497.1 VIF_000585 hypothetical protein 18626 18994 -1
CDS - ZP_04409498.1 VIF_000586 hypothetical protein 19199 19528 1
CDS - ZP_04409499.1 VIF_000587 non-specific DNA-binding protein Dps/ferroxidase 19698 20168 1
CDS - ZP_04409500.1 VIF_000588 hypothetical protein 20348 21574 -1
CDS - ZP_04409501.1 VIF_000589 hypothetical protein 21594 22211 -1
CDS - ZP_04409502.1 VIF_000590 lysophospholipase L2 22286 23302 1
CDS - ZP_04409503.1 VIF_000591 hypothetical protein 23417 24244 1
CDS - ZP_04409504.1 VIF_000592 hypothetical protein 24552 26069 1
CDS - ZP_04409505.1 VIF_000593 hypothetical protein 26066 26662 1
CDS - ZP_04409506.1 VIF_000594 sensory box/GGDEF family protein 26695 29184 -1
CDS - ZP_04409507.1 VIF_000595 2-haloalkanoic acid dehalogenase 29294 30013 -1
CDS - ZP_04409508.1 VIF_000596 tyrosine recombinase XerC 30016 30951 -1
CDS - ZP_04409509.1 VIF_000597 hypothetical protein 30920 31618 -1
CDS - ZP_04409510.1 VIF_000598 diaminopimelate epimerase 31632 32462 -1
CDS - ZP_04409511.1 VIF_000599 diaminopimelate decarboxylase 32474 33727 -1
CDS - ZP_04409512.1 VIF_000600 hypothetical protein 33760 33975 -1
CDS - ZP_04409513.1 VIF_000601 frataxin CyaY 33952 34266 1
CDS - ZP_04409514.1 VIF_000602 adenylate cyclase 34372 36825 -1
CDS - ZP_04409515.1 VIF_000603 hypothetical protein 36919 37065 1
CDS - ZP_04409516.1 VIF_000604 porphobilinogen deaminase 37242 38195 1
CDS - ZP_04409517.1 VIF_000605 uroporphyrinogen-III synthase 38257 39039 1
CDS - ZP_04409518.1 VIF_000606 HemX-like protein 39023 40222 1
CDS - ZP_04409519.1 VIF_000607 HemY-like protein 40219 41415 1
CDS - ZP_04409520.1 VIF_000608 coproporphyrinogen III oxidase oxygen-independent 41479 42921 -1
CDS - ZP_04409521.1 VIF_000609 hypothetical protein 43006 43497 -1
CDS - ZP_04409522.1 VIF_000610 hypothetical protein 43504 44052 -1
CDS - ZP_04409523.1 VIF_000611 hypothetical protein 44052 44720 -1
CDS - ZP_04409524.1 VIF_000612 cytochrome c4 44891 45562 -1
CDS - ZP_04409525.1 VIF_000613 GTP-binding protein EngB 45660 46322 1
CDS - ZP_04409526.1 VIF_000614 DNA polymerase I 47068 49788 -1
CDS - ZP_04409527.1 VIF_000615 hypothetical protein 50570 51004 -1
CDS - ZP_04409528.1 VIF_000616 porphobilinogen synthase 51108 52151 -1
CDS - ZP_04409529.1 VIF_000617 hypothetical protein 52328 53095 1
CDS - ZP_04409530.1 VIF_000618 thiosulfate sulfurtransferase GlpE 53786 54178 1
CDS - ZP_04409531.1 VIF_000619 protein GlpG 54185 55018 1
CDS - ZP_04409532.1 VIF_000620 methyl-accepting chemotaxis protein 55392 57371 1
CDS - ZP_04409533.1 VIF_000621 flagellar biosynthesis protein FliL 57491 57901 -1
CDS - ZP_04409534.1 VIF_000622 chorismate--pyruvate lyase 58093 58644 1
CDS - ZP_04409535.1 VIF_000623 4-hydroxybenzoate polyprenyltransferase 58645 59499 1
CDS - ZP_04409536.1 VIF_000624 glycerol-3-phosphate acyltransferase 59594 62020 -1
CDS - ZP_04409537.1 VIF_000625 SOS-response repressor and protease LexA 62340 62969 1
CDS - ZP_04409538.1 VIF_000626 O-methyltransferase-related protein 63048 63866 1
CDS - ZP_04409539.1 VIF_000627 DNA-damage-inducible protein F 63946 65301 1
CDS - ZP_04409540.1 VIF_000628 cytochrome c551 peroxidase 65407 66201 -1
CDS - ZP_04409541.1 VIF_000629 twin-arginine translocation protein TatC 66720 67472 -1
CDS - ZP_04409542.1 VIF_000630 twin-arginine translocation protein TatB 67562 67963 -1
CDS - ZP_04409543.1 VIF_000631 twin-arginine translocation protein TatA 67967 68215 -1
CDS - ZP_04409544.1 VIF_000632 ubiquinone biosynthesis monooxygenase UbiB 68275 69909 -1
CDS - ZP_04409545.1 VIF_000633 hypothetical protein 69906 70529 -1
CDS - ZP_04409546.1 VIF_000634 ubiquinone/menaquinone biosynthesis methyltransferase UbiE/COQ5 70538 71320 -1
CDS - ZP_04409547.1 VIF_000635 DNA recombination protein RmuC 71365 72897 -1
CDS - ZP_04409548.1 VIF_000636 permease 73020 73934 1
CDS - ZP_04409549.1 VIF_000637 methyl-accepting chemotaxis protein/sensory box protein 73992 75536 1
CDS - ZP_04409550.1 VIF_000638 NAD(FAD)-utilizing dehydrogenase 75539 76726 -1
CDS - ZP_04409551.1 VIF_000639 universal stress protein B 76868 77191 -1
CDS - ZP_04409552.1 VIF_000640 ferritin-like protein 2 77267 77812 -1
CDS - ZP_04409553.1 VIF_000641 universal stress protein A 77959 78384 1
CDS - ZP_04409554.1 VIF_000642 MadN protein 78441 79328 1
CDS - ZP_04409555.1 VIF_000643 hypothetical protein 79425 79814 -1
CDS - ZP_04409556.1 VIF_000644 SAM-dependent methyltransferase 79932 80810 -1
CDS - ZP_04409557.1 VIF_000645 sensory box/GGDEF family protein 80777 83083 -1
CDS - ZP_04409558.1 VIF_000646 transcriptional regulator AsnC 83159 83620 1
CDS - ZP_04409559.1 VIF_000647 hypothetical protein 83709 83993 -1
CDS - ZP_04409560.1 VIF_000648 hypothetical protein 84097 85299 -1
CDS - ZP_04409561.1 VIF_000649 LysR-family transcriptional regulator 85404 86345 1
CDS - ZP_04409562.1 VIF_000650 Xaa-Pro aminopeptidase 86478 88271 1
CDS - ZP_04409563.1 VIF_000651 hypothetical protein 88343 88726 -1
CDS - ZP_04409564.1 VIF_000652 thiazole biosynthesis protein ThiH 89932 91044 -1
CDS - ZP_04409565.1 VIF_000653 thiazole biosynthesis protein ThiG 91041 91811 -1
CDS - ZP_04409566.1 VIF_000654 sulfur carrier protein ThiS 91817 92074 -1
CDS - ZP_04409567.1 VIF_000655 sulfur carrier protein adenylyltransferase ThiF 92020 92799 -1
CDS - ZP_04409568.1 VIF_000656 thiamin-phosphate pyrophosphorylase 92780 94102 -1
CDS - ZP_04409569.1 VIF_000657 thiamin biosynthesis protein ThiC 94106 96043 -1
CDS - ZP_04409570.1 VIF_000658 CrbC-like protein 96295 96675 -1
tRNA - - VIF_rna044 tRNA-Trp 96908 96984 -1
tRNA - - VIF_rna045 tRNA-Asp 97014 97090 -1
rRNA - - VIF_rna046 5S ribosomal RNA 97164 97283 -1
rRNA - - VIF_rna047 23S ribosomal RNA 97412 98928 -1