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Vibrio cholerae TM 11079-80, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04409938.1 VIF_001036 hypothetical protein 51 404 1
CDS - ZP_04409939.1 VIF_001037 hypothetical protein 836 952 1
CDS - ZP_04409940.1 VIF_001038 hypothetical protein 989 1348 -1
CDS - ZP_04409941.1 VIF_001039 hypothetical protein 1459 1791 -1
CDS - ZP_04409942.1 VIF_001040 hypothetical protein 1796 2245 -1
CDS - ZP_04409943.1 VIF_001041 ATP-dependent protease La Type II 2379 4058 1
CDS - ZP_04409944.1 VIF_001042 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase 4123 4641 1
CDS - ZP_04409945.1 VIF_001043 ribosome modulation factor 4725 4937 -1
CDS - ZP_04409946.1 VIF_001044 hypothetical protein 5065 6861 -1
CDS - ZP_04409947.1 VIF_001045 ABC transporter ATP-binding protein 6867 8786 -1
CDS - ZP_04409948.1 VIF_001046 thiol-disulfide isomerase and thioredoxin 8764 9006 -1
CDS - ZP_04409949.1 VIF_001047 23S rRNA (guanine-N-2-) -methyltransferase RlmL 9015 11141 -1
CDS - ZP_04409950.1 VIF_001048 hypothetical protein 11601 12143 -1
CDS - ZP_04409951.1 VIF_001049 dihydroorotate dehydrogenase 12298 13308 -1
CDS - ZP_04409952.1 VIF_001050 NAD-specific glutamate dehydrogenase large 13382 18223 -1
CDS - ZP_04409953.1 VIF_001051 hypothetical protein 18412 18648 -1
CDS - ZP_04409954.1 VIF_001052 membrane alanine aminopeptidase N 18682 21288 -1
CDS - ZP_04409955.1 VIF_001053 hypothetical protein 21488 22204 -1
CDS - ZP_04409956.1 VIF_001054 tail-specific protease precursor 22313 24310 -1
CDS - ZP_04409957.1 VIF_001055 ProQ: influences osmotic activation of compatible solute ProP 24328 24954 -1
CDS - ZP_04409958.1 VIF_001056 free methionine-(R)-sulfoxide reductase fRMsr 25055 25540 -1
CDS - ZP_04409959.1 VIF_001057 ABC-type multidrug transport system ATPase and permease component 25578 27410 1
CDS - ZP_04409960.1 VIF_001058 paraquat-inducible protein A 27475 28692 1
CDS - ZP_04409961.1 VIF_001059 paraquat-inducible protein B 28702 31341 1
CDS - ZP_04409962.1 VIF_001060 ribosomal RNA small subunit methyltransferase F 31405 32883 1
CDS - ZP_04409963.1 VIF_001061 hypothetical protein 33067 33963 -1
CDS - ZP_04409964.1 VIF_001062 hypothetical protein 34002 35351 1
CDS - ZP_04409965.1 VIF_001063 hypothetical protein 35344 35820 -1
CDS - ZP_04409966.1 VIF_001064 hypothetical protein 35884 36030 1
CDS - ZP_04409967.1 VIF_001065 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha 35969 37156 1
CDS - ZP_04409968.1 VIF_001066 protein YajQ 37168 37650 1
CDS - ZP_04409969.1 VIF_001067 NAD-dependent protein deacetylase of SIR2 family 37787 38566 -1
CDS - ZP_04409970.1 VIF_001068 hypothetical protein 38664 39086 -1
CDS - ZP_04409971.1 VIF_001069 formate dehydrogenase -O gamma subunit 39073 40140 -1
CDS - ZP_04409972.1 VIF_001070 formate dehydrogenase-O iron-sulfur subunit 40147 40755 -1
CDS - ZP_04409973.1 VIF_001071 formate dehydrogenase-O major subunit 40767 43622 -1
CDS - ZP_04409974.1 VIF_001072 hypothetical protein 43634 43834 -1
CDS - ZP_04409975.1 VIF_001073 hypothetical protein 43908 44579 -1
CDS - ZP_04409976.1 VIF_001074 iron-sulfur cluster-binding protein 44590 46251 -1
CDS - ZP_04409977.1 VIF_001075 hypothetical protein 46501 47115 -1
CDS - ZP_04409978.1 VIF_001076 hypothetical protein 47042 47518 -1
CDS - ZP_04409979.1 VIF_001077 formate dehydrogenase chain D 47630 48577 1
CDS - ZP_04409980.1 VIF_001078 ABC transporter ATP-binding protein 48684 50276 -1
CDS - ZP_04409981.1 VIF_001079 signal transduction histidine kinase 50488 52521 -1
CDS - ZP_04409982.1 VIF_001080 sigma-54 dependent response regulator 52511 53965 -1
CDS - ZP_04409983.1 VIF_001081 ABC-type tungstate transport system binding protein 54257 55084 1
CDS - ZP_04409984.1 VIF_001082 ABC-type tungstate transport system permease protein 55091 55789 1
CDS - ZP_04409985.1 VIF_001083 ABC-type tungstate transport system ATP-binding protein 55798 56520 1
CDS - ZP_04409986.1 VIF_001084 molybdopterin-guanine dinucleotide biosynthesis protein A 56555 57085 1
CDS - ZP_04409987.1 VIF_001085 molybdopterin-guanine dinucleotide biosynthesis protein B 57082 58902 1
CDS - ZP_04409988.1 VIF_001086 hypothetical protein 58931 59206 1
CDS - ZP_04409989.1 VIF_001087 ROK family protein 59413 60321 -1
CDS - ZP_04409990.1 VIF_001088 hypothetical protein 60485 61333 -1
CDS - ZP_04409991.1 VIF_001089 sterol desaturase 61322 62113 1
CDS - ZP_04409992.1 VIF_001090 hypothetical protein 62115 64130 -1
CDS - ZP_04409993.1 VIF_001091 lipoprotein NlpC 64225 64725 1
CDS - ZP_04409994.1 VIF_001092 type IIA topoisomerase B subunit 64735 65076 -1
CDS - ZP_04409995.1 VIF_001093 fructosamine kinase family protein 65599 66465 1
CDS - ZP_04409996.1 VIF_001094 hypothetical protein 66623 66826 1
CDS - ZP_04409997.1 VIF_001095 multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE family of MDR efflux pumps 67069 68454 1
CDS - ZP_04409998.1 VIF_001096 hypothetical protein 68636 69619 1
CDS - ZP_04409999.1 VIF_001097 ATP-dependent DNA ligase 69626 70480 -1
CDS - ZP_04410000.1 VIF_001098 hypothetical protein 70781 71959 -1
CDS - ZP_04410001.1 VIF_001099 ferric siderophore transport system binding protein TonB 71956 72576 -1
CDS - ZP_04410002.1 VIF_001100 biopolymer transport protein ExbD/TolR 72576 72980 -1
CDS - ZP_04410003.1 VIF_001101 ferric siderophore transport system biopolymer transport protein ExbB 72977 73519 -1
CDS - ZP_04410004.1 VIF_001102 MotA/TolQ/ExbB proton channel family protein 73526 74899 -1
CDS - ZP_04410005.1 VIF_001103 TonB system biopolymer transport component 74899 75657 -1
CDS - ZP_04410006.1 VIF_001104 glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein 75976 77280 1
CDS - ZP_04410007.1 VIF_001105 SN-glycerol-3-phosphate transport system permease protein UgpA 77344 78237 1
CDS - ZP_04410008.1 VIF_001106 SN-glycerol-3-phosphate transport system permease protein UgpE 78247 79089 1
CDS - ZP_04410009.1 VIF_001107 SN-glycerol-3-phosphate transport ATP-binding protein UgpC 79079 80251 1
CDS - ZP_04410010.1 VIF_001108 glycerol-3-phosphate regulon repressor DeoR family 80272 81033 1
CDS - ZP_04410011.1 VIF_001109 glycerophosphoryl diester phosphodiesterase 81061 81774 1
CDS - ZP_04410012.1 VIF_001110 hypothetical protein 81850 82362 -1
CDS - ZP_04410013.1 VIF_001111 hypothetical protein 82331 82693 -1
CDS - ZP_04410014.1 VIF_001112 possible regulatory protein 82828 83838 -1
CDS - ZP_04410015.1 VIF_001113 6-phospho-beta-glucosidase 83898 85334 -1
CDS - ZP_04410016.1 VIF_001114 catalase/peroxidase 85746 87920 1
CDS - ZP_04410017.1 VIF_001115 LysR-family transcriptional regulator 88002 88931 -1
CDS - ZP_04410018.1 VIF_001116 beta-lactamase-related protein 89043 90167 1
CDS - ZP_04410019.1 VIF_001117 membrane-fusion protein 90344 91477 1
CDS - ZP_04410020.1 VIF_001118 outer membrane protein 91470 92729 1
CDS - ZP_04410021.1 VIF_001119 ABC-type antimicrobial peptide transport system permease component 92729 93943 1
CDS - ZP_04410022.1 VIF_001120 ABC-type antimicrobial peptide transport system permease component 93947 95224 1
CDS - ZP_04410023.1 VIF_001121 ABC transporter ATP-binding protein 95224 95925 1
CDS - ZP_04410024.1 VIF_001122 cytochrome d ubiquinol oxidase subunit II 95999 96991 -1
CDS - ZP_04410025.1 VIF_001123 cytochrome d ubiquinol oxidase subunit I 96988 98325 -1
CDS - ZP_04410026.1 VIF_001124 hypothetical protein 98849 99229 1
CDS - ZP_04410027.1 VIF_001125 fumarate hydratase class II 99245 100630 1
CDS - ZP_04410028.1 VIF_001126 hypothetical protein 100747 101097 -1
CDS - ZP_04410029.1 VIF_001127 hypothetical protein 101175 101633 -1
CDS - ZP_04410030.1 VIF_001128 hypothetical protein 101663 101980 -1
CDS - ZP_04410031.1 VIF_001129 lipid A biosynthesis lauroyl acyltransferase 102136 102849 -1
CDS - ZP_04410032.1 VIF_001130 hypothetical protein 102834 102956 -1
CDS - ZP_04410033.1 VIF_001131 hypothetical protein 102958 103194 -1
CDS - ZP_04410034.1 VIF_001134 transcriptional regulator LysR family 104911 105783 -1
CDS - ZP_04410035.1 VIF_001135 NADH dehydrogenase subunit 5 105902 107452 1
CDS - ZP_04410036.1 VIF_001136 hypothetical protein 107449 109968 1
CDS - ZP_04410037.1 VIF_001137 transcriptional regulator of alpha-acetolactate operon AlsR 109992 110870 -1