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Vibrio cholerae TM 11079-80, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04410069.1 VIF_001171 hypothetical protein 23 568 1
CDS - ZP_04410070.1 VIF_001172 hypothetical protein 556 648 -1
CDS - ZP_04410071.1 VIF_001173 hypothetical protein 703 1083 1
CDS - ZP_04410072.1 VIF_001174 phage integrase 1214 1669 -1
CDS - ZP_04410073.1 VIF_001175 phage integrase 1764 2999 -1
tRNA - - VIF_rna051 tRNA-Ser 3312 3399 -1
CDS - ZP_04410074.1 VIF_001176 transporter AcrB/D/F family 3611 6661 -1
CDS - ZP_04410075.1 VIF_001177 hypothetical protein 6661 7713 -1
CDS - ZP_04410076.1 VIF_001178 hypothetical protein 7628 7726 1
CDS - ZP_04410077.1 VIF_001179 hypothetical protein 7955 8533 -1
CDS - ZP_04410078.1 VIF_001180 paraquat-inducible protein B 8530 10158 -1
CDS - ZP_04410079.1 VIF_001181 paraquat-inducible protein A 10173 11471 -1
CDS - ZP_04410080.1 VIF_001182 hypothetical protein 11508 11615 -1
CDS - ZP_04410081.1 VIF_001183 transcriptional regulator 11738 12367 1
CDS - ZP_04410082.1 VIF_001184 succinate-semialdehyde dehydrogenase [NADP+] 12382 13851 1
CDS - ZP_04410083.1 VIF_001185 hypothetical protein 13832 14113 -1
CDS - ZP_04410084.1 VIF_001186 1-aminocyclopropane-1-carboxylate deaminase 14158 15069 -1
CDS - ZP_04410085.1 VIF_001187 hypothetical protein 15554 16228 1
CDS - ZP_04410086.1 VIF_001188 acyl-CoA dehydrogenase short-chain specific 16284 18566 1
CDS - ZP_04410087.1 VIF_001189 short-chain alcohol dehydrogenase family 18758 19969 1
CDS - ZP_04410088.1 VIF_001190 translation initiation factor 1 20273 20491 -1
CDS - ZP_04410089.1 VIF_001191 leucyl/phenylalanyl-tRNA--protein transferase 20575 21276 -1
CDS - ZP_04410090.1 VIF_001192 leucyl/phenylalanyl-tRNA--protein transferase 21280 22011 -1
CDS - ZP_04410091.1 VIF_001193 5-Enolpyruvylshikimate-3-phosphate synthase 22278 23558 1
CDS - ZP_04410092.1 VIF_001194 protein YciN 23649 23897 -1
CDS - ZP_04410093.1 VIF_001195 DNA topoisomerase I 24234 26864 1
CDS - ZP_04410094.1 VIF_001196 hypothetical protein 27393 27527 -1
CDS - ZP_04410095.1 VIF_001197 glucose-1-phosphate adenylyltransferase 27659 28876 1
CDS - ZP_04410096.1 VIF_001198 glycogen synthase ADP-glucose transglucosylase 28878 30332 1
CDS - ZP_04410097.1 VIF_001199 hypothetical protein 30520 31338 1
CDS - ZP_04410098.1 VIF_001200 hypothetical protein 31343 31654 -1
CDS - ZP_04410099.1 VIF_001201 dihydrolipoamide dehydrogenase 31688 32377 -1
CDS - ZP_04410100.1 VIF_001202 DNA transformation protein TfoX 32723 33310 -1
CDS - ZP_04410101.1 VIF_001203 purine nucleotide synthesis repressor 33669 34679 -1
CDS - ZP_04410102.1 VIF_001204 chaperone protein TorD 35086 35748 -1
CDS - ZP_04410103.1 VIF_001205 TorCAD operon transcriptional regulatory protein TorR 35973 36677 1
CDS - ZP_04410104.1 VIF_001206 membrane protein functionally coupled to the MukBEF chromosome partitioning mechanism 36778 37626 -1
CDS - ZP_04410105.1 VIF_001207 S-adenosylmethionine-dependent methyltransferase functionally coupled to the MukBEF chromosome partitioning mechanism 37716 38498 1
CDS - ZP_04410106.1 VIF_001208 chromosome partition protein MukF 38510 39847 1
CDS - ZP_04410107.1 VIF_001209 chromosome partition protein MukE 39807 40550 1
CDS - ZP_04410108.1 VIF_001210 chromosome partition protein MukB 40547 45022 1
CDS - ZP_04410109.1 VIF_001211 transcriptional regulator AsnC family 45224 45667 -1
CDS - ZP_04410110.1 VIF_001212 hypothetical protein 45745 46359 1
CDS - ZP_04410111.1 VIF_001213 hypothetical protein 46497 48851 -1
CDS - ZP_04410112.1 VIF_001214 hypothetical protein 49131 51587 1
CDS - ZP_04410113.1 VIF_001215 hypothetical protein 51721 54489 -1
CDS - ZP_04410114.1 VIF_001216 hypothetical protein 54713 55399 1
CDS - ZP_04410115.1 VIF_001217 hypothetical protein 55513 55716 1
CDS - ZP_04410116.1 VIF_001218 transcriptional activator MetR 55723 56640 -1
CDS - ZP_04410117.1 VIF_001219 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 56911 59196 1
CDS - ZP_04410118.1 VIF_001220 hypothetical protein 59471 59929 -1
CDS - ZP_04410119.1 VIF_001221 hypothetical protein 59871 60167 -1
CDS - ZP_04410120.1 VIF_001222 acyl-CoA hydrolase 60242 60682 -1
CDS - ZP_04410121.1 VIF_001223 hypothetical protein 60821 61366 -1
CDS - ZP_04410122.1 VIF_001224 phage protein 61599 61868 -1
CDS - ZP_04410123.1 VIF_001225 uncharacterized conserved protein 62020 62667 -1
CDS - ZP_04410124.1 VIF_001226 nucleoside-diphosphate-sugar epimerase 62660 63490 -1
CDS - ZP_04410125.1 VIF_001227 DNA-binding protein inhibitor Id-2-related protein 63594 63827 -1
CDS - ZP_04410126.1 VIF_001228 formate efflux transporter 64179 65021 1
CDS - ZP_04410127.1 VIF_001229 periplasmic nitrate reductase component NapE 65701 65883 1
CDS - ZP_04410128.1 VIF_001230 cytochrome c-type protein TorY 65930 67114 1
CDS - ZP_04410129.1 VIF_001231 trimethylamine-N-oxide reductase 67138 69600 1
CDS - ZP_04410130.1 VIF_001232 hypothetical protein 69799 71535 1
CDS - ZP_04410131.1 VIF_001233 hypothetical protein 71598 72806 -1
CDS - ZP_04410132.1 VIF_001234 manganese-dependent inorganic pyrophosphatase 72992 73897 1
CDS - ZP_04410133.1 VIF_001235 hypothetical protein 74032 74421 1
CDS - ZP_04410134.1 VIF_001236 hypothetical protein 74458 75225 -1
CDS - ZP_04410135.1 VIF_001237 peptide transport system ATP-binding protein SapF 75229 76017 -1
CDS - ZP_04410136.1 VIF_001238 peptide transport system ATP-binding protein SapD 76014 77009 -1
CDS - ZP_04410137.1 VIF_001239 peptide transport system permease protein SapC 77009 77896 -1
CDS - ZP_04410138.1 VIF_001240 peptide transport system permease protein SapB 77883 78845 -1
CDS - ZP_04410139.1 VIF_001241 peptide transport periplasmic protein SapA 78845 80467 -1
CDS - ZP_04410140.1 VIF_001242 Psp operon transcriptional activator 80581 81597 -1
CDS - ZP_04410141.1 VIF_001243 phage shock protein A 81807 82475 1
CDS - ZP_04410142.1 VIF_001244 phage shock protein B 82489 82722 1
CDS - ZP_04410143.1 VIF_001245 phage shock protein C 82688 83104 1
CDS - ZP_04410144.1 VIF_001246 hypothetical protein 83276 84307 1
CDS - ZP_04410145.1 VIF_001247 hypothetical protein 84309 85388 1
CDS - ZP_04410146.1 VIF_001248 transporter AcrB/D/F family 85366 88479 1
CDS - ZP_04410147.1 VIF_001249 DNA-3-methyladenine glycosylase 88539 89141 1
CDS - ZP_04410148.1 VIF_001250 universal stress protein family 1 89209 90174 -1
CDS - ZP_04410149.1 VIF_001251 glutathione-regulated potassium-efflux system protein KefB 90305 92017 -1
CDS - ZP_04410150.1 VIF_001252 cystathionine beta-lyase 92296 93486 -1
CDS - ZP_04410151.1 VIF_001253 hypothetical protein 93496 93597 1
CDS - ZP_04410152.1 VIF_001254 cardiolipin synthetase 93603 95057 -1
CDS - ZP_04410153.1 VIF_001255 hypothetical protein 95466 96752 1
CDS - ZP_04410154.1 VIF_001256 hypothetical protein 96749 96901 -1
CDS - ZP_04410155.1 VIF_001257 pseudouridylate synthase LSU rRNA-specific 96851 97558 1
CDS - ZP_04410156.1 VIF_001258 hypothetical protein 97623 98237 -1
CDS - ZP_04410157.1 VIF_001259 ABC transporter ATP-binding protein YnjD 98230 98892 -1
CDS - ZP_04410158.1 VIF_001260 ABC transporter permease protein YnjC 98858 100558 -1
CDS - ZP_04410159.1 VIF_001261 ABC transporter substrate-binding protein YnjB 100572 101720 -1
CDS - ZP_04410160.1 VIF_001262 heat shock protein HslJ 101928 102371 -1
CDS - ZP_04410161.1 VIF_001263 hypothetical protein 102518 102736 1
CDS - ZP_04410162.1 VIF_001264 hypothetical protein 102789 103010 -1
CDS - ZP_04410163.1 VIF_001265 ABC-type multidrug transport system permease component 103169 104266 -1
CDS - ZP_04410164.1 VIF_001266 ABC-type multidrug transport system ATPase component 104263 105189 -1
CDS - ZP_04410165.1 VIF_001267 membrane-fusion protein 105199 106146 -1
CDS - ZP_04410166.1 VIF_001268 serine transporter 106315 107568 -1
CDS - ZP_04410167.1 VIF_001269 permease 107904 108767 1