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Vibrio cholerae TM 11079-80, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04410205.1 VIF_001307 transketolase 172 1341 1
CDS - ZP_04410206.1 VIF_001308 hypothetical protein 1361 1456 1
CDS - ZP_04410207.1 VIF_001309 iron-regulated virulence regulatory protein IrgB 1413 2309 -1
CDS - ZP_04410208.1 VIF_001310 TonB-dependent receptor 2454 4412 1
CDS - ZP_04410209.1 VIF_001311 D-erythrose-4-phosphate dehydrogenase 4564 5589 1
CDS - ZP_04410210.1 VIF_001312 phosphoglycerate kinase 5723 6901 1
CDS - ZP_04410211.1 VIF_001313 fructose-bisphosphate aldolase class II 7057 8133 1
CDS - ZP_04410212.1 VIF_001314 hypothetical protein 8429 9292 1
CDS - ZP_04410213.1 VIF_001315 lysine efflux permease 9356 9991 -1
CDS - ZP_04410214.1 VIF_001316 chromosome initiation inhibitor 10156 11052 1
CDS - ZP_04410215.1 VIF_001317 hypothetical protein 11132 11848 1
CDS - ZP_04410216.1 VIF_001318 hypothetical protein 12180 12311 1
CDS - ZP_04410217.1 VIF_001319 pyruvate kinase 12383 13795 -1
CDS - ZP_04410218.1 VIF_001320 transcriptional regulator of glmS gene DeoR family 14223 14993 1
CDS - ZP_04410219.1 VIF_001321 glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 15056 16888 1
CDS - ZP_04410220.1 VIF_001322 transposase OrfAB subunit B 17188 17949 -1
CDS - ZP_04410221.1 VIF_001323 iSCps1 transposase 18003 19034 1
CDS - ZP_04410222.1 VIF_001324 hypothetical protein 19228 19530 -1
CDS - ZP_04410223.1 VIF_001325 hypothetical protein 19666 20523 1
CDS - ZP_04410224.1 VIF_001326 methyl-accepting chemotaxis protein 20535 22007 1
CDS - ZP_04410225.1 VIF_001327 transposase OrfAB subunit B 22081 22500 -1
CDS - ZP_04410226.1 VIF_001328 hypothetical protein 22534 22626 1
CDS - ZP_04410227.1 VIF_001329 hypothetical protein 22614 23099 -1
CDS - ZP_04410228.1 VIF_001330 transposase 23365 24897 -1
CDS - ZP_04410229.1 VIF_001331 transposase OrfAB subunit B 25027 25551 -1
CDS - ZP_04410230.1 VIF_001332 transposase OrfAB subunit A 25548 25856 -1
CDS - ZP_04410231.1 VIF_001333 hypothetical protein 26322 27590 1
CDS - ZP_04410232.1 VIF_001334 hemagglutinin associated protein 27574 28284 -1
CDS - ZP_04410233.1 VIF_001335 TRAP transporter solute receptor unknown substrate 6 28602 29681 -1
CDS - ZP_04410234.1 VIF_001336 hypothetical protein 29938 31698 -1
tRNA - - VIF_rna052 tRNA-Met 32170 32245 -1
CDS - ZP_04410235.1 VIF_001337 RNA polymerase sigma factor RpoD 32390 34318 -1
CDS - ZP_04410236.1 VIF_001338 DNA primase 34366 36183 -1
CDS - ZP_04410237.1 VIF_001339 GatB/Yqey 36231 36674 -1
CDS - ZP_04410238.1 VIF_001340 SSU ribosomal protein S21p 36704 36919 -1
CDS - ZP_04410239.1 VIF_001341 endopeptidase 37160 38179 1
CDS - ZP_04410240.1 VIF_001342 hypothetical protein 38333 39145 1
CDS - ZP_04410241.1 VIF_001343 acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY 39194 39820 -1
CDS - ZP_04410242.1 VIF_001344 dihydroneopterin aldolase 39988 40362 1
CDS - ZP_04410243.1 VIF_001345 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 40359 40865 1
CDS - ZP_04410244.1 VIF_001346 undecaprenyl-diphosphatase 40862 41665 1
CDS - ZP_04410245.1 VIF_001347 cell division protein FtsB 41774 42064 1
CDS - ZP_04410246.1 VIF_001348 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 42061 42759 1
CDS - ZP_04410247.1 VIF_001349 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 42756 43232 1
CDS - ZP_04410248.1 VIF_001350 tRNA pseudouridine 13 synthase 43262 44347 1
CDS - ZP_04410249.1 VIF_001351 5'-nucleotidase SurE 44310 45101 1
CDS - ZP_04410250.1 VIF_001352 protein-L-isoaspartate O-methyltransferase 45094 45720 1
CDS - ZP_04410251.1 VIF_001353 membrane protein 45720 46655 1
CDS - ZP_04410252.1 VIF_001354 RNA polymerase sigma factor RpoS 46729 47736 1
CDS - ZP_04410253.1 VIF_001355 DNA mismatch repair protein MutS 47830 50469 -1
CDS - ZP_04410254.1 VIF_001356 cysteine synthase B 50686 51573 -1
CDS - ZP_04410255.1 VIF_001357 sulfate and thiosulfate binding protein CysP 51831 52832 1
CDS - ZP_04410256.1 VIF_001358 sulfate transport system permease protein CysT 52909 53760 1
CDS - ZP_04410257.1 VIF_001359 sulfate transport system permease protein CysW 53771 54634 1
CDS - ZP_04410258.1 VIF_001360 sulfate and thiosulfate import ATP-binding protein CysA 54631 55761 1
CDS - ZP_04410259.1 VIF_001361 hypothetical protein 55928 56434 1
CDS - ZP_04410260.1 VIF_001362 RecA protein 56569 57633 1
CDS - ZP_04410261.1 VIF_001363 regulatory protein RecX 57766 58224 1
CDS - ZP_04410262.1 VIF_001364 alanyl-tRNA synthetase 58397 60979 1
CDS - ZP_04410263.1 VIF_001365 hypothetical protein 61011 61130 1
CDS - ZP_04410264.1 VIF_001366 aspartokinase 61243 62370 1
CDS - ZP_04410265.1 VIF_001367 carbon storage regulator 62462 62659 1
tRNA - - VIF_rna053 tRNA-Ser 62841 62933 1
tRNA - - VIF_rna054 tRNA-Arg 62967 63043 1
tRNA - - VIF_rna055 tRNA-Ser 63066 63158 1
tRNA - - VIF_rna056 tRNA-Arg 63225 63301 1
tRNA - - VIF_rna057 tRNA-Arg 63357 63433 1
tRNA - - VIF_rna058 tRNA-Arg 63505 63581 1
CDS - ZP_04410266.1 VIF_001368 oxaloacetate decarboxylase gamma chain 63855 64208 1
CDS - ZP_04410267.1 VIF_001369 oxaloacetate decarboxylase alpha chain 64237 66030 1
CDS - ZP_04410268.1 VIF_001370 oxaloacetate decarboxylase beta chain 66040 67170 1
CDS - ZP_04410269.1 VIF_001371 NADPH:quinone reductase 67287 68243 1
CDS - ZP_04410270.1 VIF_001372 hypothetical protein 68237 68698 1
CDS - ZP_04410271.1 VIF_001373 hypothetical protein 68695 68811 -1
CDS - ZP_04410272.1 VIF_001374 protease insulinase family protein 68705 71563 1
CDS - ZP_04410273.1 VIF_001375 glutamate--cysteine ligase 71675 73249 1
CDS - ZP_04410274.1 VIF_001376 S-ribosylhomocysteine lyase/autoinducer-2 production protein LuxS 73298 73816 1
CDS - ZP_04410275.1 VIF_001377 hypothetical protein 73886 75166 -1
CDS - ZP_04410276.1 VIF_001378 ABC-type uncharacterized transport system permease component 75249 76052 -1
CDS - ZP_04410277.1 VIF_001379 hypothetical protein 76146 76241 1
CDS - ZP_04410278.1 VIF_001380 signal recognition particle subunit Ffh SRP54 76256 77641 1
CDS - ZP_04410279.1 VIF_001381 SSU ribosomal protein S16p 77856 78125 1
CDS - ZP_04410280.1 VIF_001382 16S rRNA processing protein RimM 78153 78707 1
CDS - ZP_04410281.1 VIF_001383 tRNA (Guanine37-N1)-methyltransferase 78735 79478 1
CDS - ZP_04410282.1 VIF_001384 LSU ribosomal protein L19p 79520 79873 1
CDS - ZP_04410283.1 VIF_001385 outer membrane stress sensor protease DegS 79994 81052 -1
CDS - ZP_04410284.1 VIF_001386 outer membrane stress sensor protease DegQ 81230 82600 -1
CDS - ZP_04410285.1 VIF_001387 hypothetical protein 82729 83166 -1
CDS - ZP_04410286.1 VIF_001388 hypothetical protein 83320 84423 1
CDS - ZP_04410287.1 VIF_001389 LSU ribosomal protein L13p (L13Ae) 84647 85075 1
CDS - ZP_04410288.1 VIF_001390 SSU ribosomal protein S9p (S16e) 85091 85483 1
CDS - ZP_04410289.1 VIF_001391 ubiquinol-cytochrome C reductase iron-sulfur subunit 85811 86404 1
CDS - ZP_04410290.1 VIF_001392 ubiquinol--cytochrome c reductase cytochrome B subunit 86404 87669 1
CDS - ZP_04410291.1 VIF_001393 ubiquinol cytochrome C oxidoreductase cytochrome C1 subunit 87666 88403 1
CDS - ZP_04410292.1 VIF_001394 stringent starvation protein A 88503 89138 1
CDS - ZP_04410293.1 VIF_001395 stringent starvation protein B 89138 89614 1
CDS - ZP_04410294.1 VIF_001396 hypothetical protein 89682 90251 -1
CDS - ZP_04410295.1 VIF_001397 phosphoheptose isomerase 90254 90844 -1
CDS - ZP_04410296.1 VIF_001398 hypothetical protein 90848 91213 -1
CDS - ZP_04410297.1 VIF_001399 hypothetical protein 91203 93077 -1