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Vibrio cholerae TM 11079-80, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04410740.1 VIF_001851 hypothetical protein 532 1257 -1
CDS - ZP_04410741.1 VIF_001852 histidine ammonia-lyase 1407 2957 -1
CDS - ZP_04410742.1 VIF_001853 urocanate hydratase 2954 4651 -1
CDS - ZP_04410743.1 VIF_001854 formiminoglutamase 4670 5680 -1
CDS - ZP_04410744.1 VIF_001855 imidazolonepropionase 5670 6878 -1
CDS - ZP_04410745.1 VIF_001856 histidine utilization repressor 6982 7659 -1
CDS - ZP_04410746.1 VIF_001857 hypothetical protein 7809 8756 -1
CDS - ZP_04410747.1 VIF_001858 hypothetical protein 8895 9215 -1
CDS - ZP_04410748.1 VIF_001859 translation elongation factor P-related protein 9220 9819 -1
CDS - ZP_04410749.1 VIF_001860 hypothetical protein 10005 10772 1
CDS - ZP_04410750.1 VIF_001861 EAL domain protein 10959 12980 1
CDS - ZP_04410751.1 VIF_001862 DNA polymerase II 12952 15315 -1
CDS - ZP_04410752.1 VIF_001863 BarA-associated response regulator UvrY 15691 16335 1
CDS - ZP_04410753.1 VIF_001864 excinuclease ABC subunit C 16401 18167 1
CDS - ZP_04410754.1 VIF_001865 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 18215 18772 1
tRNA - - VIF_rna074 tRNA-Cys 19030 19103 1
tRNA - - VIF_rna075 tRNA-Gly 19106 19181 1
tRNA - - VIF_rna076 tRNA-Leu 19246 19332 1
tRNA - - VIF_rna077 tRNA-OTHER 19343 19417 1
CDS - ZP_04410755.1 VIF_001866 GGDEF family protein 19664 20782 1
CDS - ZP_04410756.1 VIF_001867 histone acetyltransferase HPA2 20779 21264 -1
CDS - ZP_04410757.1 VIF_001868 hypothetical protein 21395 21523 1
CDS - ZP_04410758.1 VIF_001869 phenylalanyl-tRNA synthetase alpha chain 21555 22538 1
CDS - ZP_04410759.1 VIF_001870 phenylalanyl-tRNA synthetase beta chain 22565 24952 1
CDS - ZP_04410760.1 VIF_001871 integration host factor alpha subunit 25391 25687 1
CDS - ZP_04410761.1 VIF_001872 hypothetical protein 25806 26585 -1
CDS - ZP_04410762.1 VIF_001873 thiopurine S-methyltransferase 27054 27710 1
CDS - ZP_04410763.1 VIF_001874 phosphoribosylglycinamide formyltransferase 2 27803 28984 -1
CDS - ZP_04410764.1 VIF_001875 membrane protein 29132 30007 -1
CDS - ZP_04410765.1 VIF_001876 cytidine deaminase 30166 31053 -1
CDS - ZP_04410766.1 VIF_001877 lrgA-associated membrane protein LrgB 31223 31897 -1
CDS - ZP_04410767.1 VIF_001878 hypothetical protein 31888 32277 -1
CDS - ZP_04410768.1 VIF_001879 exodeoxyribonuclease I 32294 33730 -1
CDS - ZP_04410769.1 VIF_001880 sodium/dicarboxylate symporter 33862 35241 -1
CDS - ZP_04410770.1 VIF_001881 hypothetical protein 35581 36045 1
CDS - ZP_04410771.1 VIF_001882 hypothetical protein 36325 36426 -1
CDS - ZP_04410772.1 VIF_001883 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 36464 37489 1
CDS - ZP_04410773.1 VIF_001884 cobalamin synthase 37489 38274 1
CDS - ZP_04410774.1 VIF_001885 adenosylcobinamide-phosphate guanylyltransferase 38283 38822 1
CDS - ZP_04410775.1 VIF_001886 alpha-ribazole-5'-phosphate phosphatase 38829 39431 1
CDS - ZP_04410776.1 VIF_001887 succinylglutamate desuccinylase 39747 40775 1
CDS - ZP_04410777.1 VIF_001888 vitamin B12 ABC transporter permease component BtuC 40844 41851 1
CDS - ZP_04410778.1 VIF_001889 vitamin B12 ABC transporter ATPase component BtuD 41838 42593 1
CDS - ZP_04410779.1 VIF_001890 hypothetical protein 42978 43553 -1
CDS - ZP_04410780.1 VIF_001891 hypothetical protein 43753 44148 -1
CDS - ZP_04410781.1 VIF_001892 methyl-accepting chemotaxis protein 44196 45806 -1
CDS - ZP_04410782.1 VIF_001893 glycine cleavage system regulatory protein 46037 46549 -1
CDS - ZP_04410783.1 VIF_001894 ubiquitin-protein ligase 46816 47715 -1
CDS - ZP_04410784.1 VIF_001895 competence/damage-inducible protein CinA 47879 49126 1
CDS - ZP_04410785.1 VIF_001896 hypothetical protein 49271 49630 1
CDS - ZP_04410786.1 VIF_001897 ferredoxin 49858 50136 -1
CDS - ZP_04410787.1 VIF_001898 ribonucleotide reductase of class Ia (aerobic) beta subunit 50136 51281 -1
CDS - ZP_04410788.1 VIF_001899 ribonucleotide reductase of class Ia (aerobic) alpha subunit 51365 53650 -1
CDS - ZP_04410789.1 VIF_001900 3-demethylubiquinone-9 3-methyltransferase 54099 54836 -1
CDS - ZP_04410790.1 VIF_001901 DNA gyrase subunit A 55188 57875 1
CDS - ZP_04410791.1 VIF_001902 rhodanese domain protein 58103 59086 1
CDS - ZP_04410792.1 VIF_001903 transcriptional regulator AraC family 59113 60012 -1
CDS - ZP_04410793.1 VIF_001904 sugar efflux transporter B 60262 61476 1
CDS - ZP_04410794.1 VIF_001905 hypothetical protein 61659 61835 1
CDS - ZP_04410795.1 VIF_001906 GTP cyclohydrolase II 62006 62656 1
CDS - ZP_04410796.1 VIF_001907 iron-regulated protein A precursor 62837 64099 1
CDS - ZP_04410797.1 VIF_001908 hypothetical protein 64306 65691 1
CDS - ZP_04410798.1 VIF_001909 iron-regulated protein A precursor 65701 66708 1
CDS - ZP_04410799.1 VIF_001910 hypothetical protein 66689 67771 1
CDS - ZP_04410800.1 VIF_001911 hypothetical protein 68019 69593 1
CDS - ZP_04410801.1 VIF_001912 hypothetical protein 69739 70287 1
CDS - ZP_04410802.1 VIF_001913 hydroxyacylglutathione hydrolase 70351 71007 1
CDS - ZP_04410803.1 VIF_001914 hypothetical protein 71001 71717 -1
CDS - ZP_04410804.1 VIF_001915 hypothetical protein 71821 72246 1
CDS - ZP_04410805.1 VIF_001916 TRAP transporter solute receptor unknown substrate 6 72608 73714 1
CDS - ZP_04410806.1 VIF_001917 TRAP dicarboxylate transporter DctQ subunit unknown substrate 6 73816 74349 1
CDS - ZP_04410807.1 VIF_001918 TRAP dicarboxylate transporter DctM subunit unknown substrate 6 74359 75642 1
CDS - ZP_04410808.1 VIF_001919 hypothetical protein 75655 75840 1
CDS - ZP_04410809.1 VIF_001922 DNA-binding response regulator LuxR family 77085 77735 1
CDS - ZP_04410810.1 VIF_001923 transcriptional regulator MarR family 77737 78216 -1
CDS - ZP_04410811.1 VIF_001924 choline-glycine betaine transporter 78591 80195 1
CDS - ZP_04410812.1 VIF_001925 deacetylase DA1 80361 81656 -1
CDS - ZP_04410813.1 VIF_001926 PTS system cellobiose-specific IIB component 81899 82204 1
CDS - ZP_04410814.1 VIF_001927 PTS system cellobiose-specific IIC component 82283 83623 1
CDS - ZP_04410815.1 VIF_001928 PTS system cellobiose-specific IIA component 83670 84005 1
CDS - ZP_04410816.1 VIF_001929 6-phospho-beta-glucosidase 83987 85309 1
CDS - ZP_04410817.1 VIF_001930 hypothetical protein 85251 86090 1
CDS - ZP_04410818.1 VIF_001931 transcriptional regulator LacI family 86191 87213 1
CDS - ZP_04410819.1 VIF_001932 glucans biosynthesis glucosyltransferase H 87360 89525 -1
CDS - ZP_04410820.1 VIF_001933 glucans biosynthesis protein G precursor 89544 91202 -1
CDS - ZP_04410821.1 VIF_001934 methyl-accepting chemotaxis protein 91574 93469 1
CDS - ZP_04410822.1 VIF_001935 DNA polymerase III epsilon subunit 93615 94316 -1
CDS - ZP_04410823.1 VIF_001936 hypothetical protein 94322 96235 -1
CDS - ZP_04410824.1 VIF_001937 aspartate aminotransferase 96527 97726 -1
CDS - ZP_04410825.1 VIF_001938 phosphomethylpyrimidine kinase 98240 99088 1
CDS - ZP_04410826.1 VIF_001939 asparaginyl-tRNA synthetase 99154 100554 -1
CDS - ZP_04410827.1 VIF_001942 queuosine biosynthesis QueD PTPS-I 102767 103138 1
CDS - ZP_04410828.1 VIF_001943 outer membrane protein of RND family multidrug efflux pump 103197 104567 -1
CDS - ZP_04410829.1 VIF_001944 macrolide export ATP-binding/permease protein macB 104574 106532 -1
CDS - ZP_04410830.1 VIF_001945 macrolide-specific efflux protein MacA 106532 107719 -1
CDS - ZP_04410831.1 VIF_001946 L-serine dehydratase 107885 109246 -1
CDS - ZP_04410832.1 VIF_001947 serine transporter 109339 110592 -1
CDS - ZP_04410833.1 VIF_001948 hypothetical protein 110891 111505 -1
CDS - ZP_04410834.1 VIF_001949 para-aminobenzoate synthase aminase component 111828 113204 -1
CDS - ZP_04410835.1 VIF_001950 fumarate hydratase class I aerobic 113380 114897 1