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Vibrio cholerae TM 11079-80, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04410979.1 VIF_002097 HD-GYP domain-containing protein 228 1481 -1
CDS - ZP_04410980.1 VIF_002098 hypothetical protein 1404 1499 1
tRNA - - VIF_rna078 tRNA-Leu 1640 1724 -1
CDS - ZP_04410981.1 VIF_002099 hypothetical protein 1878 2387 1
CDS - ZP_04410982.1 VIF_002100 hypothetical protein 2492 3562 -1
CDS - ZP_04410983.1 VIF_002101 hypothetical protein 3566 4666 -1
CDS - ZP_04410984.1 VIF_002102 cytosol aminopeptidase PepA 4860 6371 1
CDS - ZP_04410985.1 VIF_002103 DNA polymerase III chi subunit 6440 6904 1
CDS - ZP_04410986.1 VIF_002104 valyl-tRNA synthetase 6998 9859 1
CDS - ZP_04410987.1 VIF_002105 hydroxypyruvate reductase 9937 10914 -1
CDS - ZP_04410988.1 VIF_002106 ribosomal large subunit pseudouridine synthase A 10954 11691 -1
CDS - ZP_04410989.1 VIF_002107 RNA polymerase associated protein RapA 11788 14697 -1
CDS - ZP_04410990.1 VIF_002108 hypothetical protein 14968 15063 1
CDS - ZP_04410991.1 VIF_002109 phosphate starvation-inducible protein PhoH 15119 16495 1
CDS - ZP_04410992.1 VIF_002110 ornithine carbamoyltransferase 16645 17649 1
CDS - ZP_04410993.1 VIF_002111 hypothetical protein 17747 17842 1
CDS - ZP_04410994.1 VIF_002112 aspartate carbamoyltransferase 17836 18828 1
CDS - ZP_04410995.1 VIF_002113 aspartate carbamoyltransferase regulatory chain PyrI 18840 19307 1
CDS - ZP_04410996.1 VIF_002114 endoribonuclease L-PSP 19412 19801 1
CDS - ZP_04410997.1 VIF_002115 1-acyl-sn-glycerol-3-phosphate acyltransferase 19882 20610 -1
CDS - ZP_04410998.1 VIF_002116 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 20689 21948 -1
CDS - ZP_04410999.1 VIF_002117 BolA/YrbA family protein 21956 22210 -1
CDS - ZP_04411000.1 VIF_002118 hypothetical protein 22203 22532 -1
CDS - ZP_04411001.1 VIF_002119 uncharacterized ABC transporter auxiliary component YrbC 22529 23167 -1
CDS - ZP_04411002.1 VIF_002120 uncharacterized ABC transporter, periplasmic component YrbD 23171 23662 -1
CDS - ZP_04411003.1 VIF_002121 uncharacterized ABC transporter permease component YrbE 23665 24456 -1
CDS - ZP_04411004.1 VIF_002122 uncharacterized ABC transporter ATP-binding protein YrbF 24446 25249 -1
CDS - ZP_04411005.1 VIF_002123 hypothetical protein 25641 25790 -1
CDS - ZP_04411006.1 VIF_002124 YrbG protein 25806 26804 1
CDS - ZP_04411007.1 VIF_002125 arabinose 5-phosphate isomerase 26854 27834 1
CDS - ZP_04411008.1 VIF_002126 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 27834 28391 1
CDS - ZP_04411009.1 VIF_002127 YrbK protein 28388 28951 1
CDS - ZP_04411010.1 VIF_002128 LptA protein 28887 29426 1
CDS - ZP_04411011.1 VIF_002129 lipopolysaccharide ABC transporter ATP-binding protein LptB 29429 30154 1
CDS - ZP_04411012.1 VIF_002130 RNA polymerase sigma-54 factor RpoN 30210 31673 1
CDS - ZP_04411013.1 VIF_002131 ribosome hibernation protein YhbH 31698 31985 1
CDS - ZP_04411014.1 VIF_002132 PTS system nitrogen regulatory IIA component 31988 32434 1
CDS - ZP_04411015.1 VIF_002133 hypothetical protein 32447 33307 1
CDS - ZP_04411016.1 VIF_002134 phosphocarrier protein nitrogen regulation associated 33316 33594 1
CDS - ZP_04411017.1 VIF_002135 magnesium transporter 33755 35116 1
CDS - ZP_04411018.1 VIF_002136 PmbA protein 35189 36532 -1
CDS - ZP_04411019.1 VIF_002137 hypothetical protein 36634 37212 1
CDS - ZP_04411020.1 VIF_002138 thiamin ABC transporter ATPase component 37316 38044 -1
CDS - ZP_04411021.1 VIF_002139 thiamin ABC transporter transmembrane component 38044 39636 -1
CDS - ZP_04411022.1 VIF_002140 thiamin ABC transporter substrate-binding component 39646 40638 -1
CDS - ZP_04411023.1 VIF_002141 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX 40900 41529 -1
CDS - ZP_04411024.1 VIF_002142 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 41542 42897 -1
CDS - ZP_04411025.1 VIF_002143 fructose-1,6-bisphosphatase type I 43203 44213 1
CDS - ZP_04411026.1 VIF_002144 inorganic pyrophosphatase 44383 44913 1
CDS - ZP_04411027.1 VIF_002145 hypothetical protein 44973 45320 -1
CDS - ZP_04411028.1 VIF_002146 uncharacterized protein YtfN 45331 49095 -1
CDS - ZP_04411029.1 VIF_002147 uncharacterized protein YtfM precursor 49092 50831 -1
CDS - ZP_04411030.1 VIF_002148 peptide methionine sulfoxide reductase MsrA 50986 51624 1
CDS - ZP_04411031.1 VIF_002149 protein YtfJ precursor 51706 52257 1
CDS - ZP_04411032.1 VIF_002150 hypothetical protein 52475 52780 1
CDS - ZP_04411033.1 VIF_002151 hypothetical protein 52829 53557 1
CDS - ZP_04411034.1 VIF_002152 ABC-type antimicrobial peptide transport system ATPase component 53636 54355 1
CDS - ZP_04411035.1 VIF_002153 ABC-type antimicrobial peptide transport system permease component 54346 55611 1
CDS - ZP_04411036.1 VIF_002154 hypothetical protein 55664 56185 1
CDS - ZP_04411037.1 VIF_002155 hypothetical protein 56496 57395 1
CDS - ZP_04411038.1 VIF_002156 adenylylsulfate kinase 57476 58123 -1
CDS - ZP_04411039.1 VIF_002157 sulfate adenylyltransferase subunit 1 58134 59564 -1
CDS - ZP_04411040.1 VIF_002158 sulfate adenylyltransferase subunit 2 59582 60490 -1
CDS - ZP_04411041.1 VIF_002159 uroporphyrinogen-III methyltransferase 60593 61492 -1
CDS - ZP_04411042.1 VIF_002160 2',3'-cyclic-nucleotide 2'-phosphodiesterase 61772 63736 1
CDS - ZP_04411043.1 VIF_002161 cAMP-binding protein 63856 64425 1
CDS - ZP_04411044.1 VIF_002162 ATP-dependent RNA helicase DbpA 64428 65747 -1
CDS - ZP_04411045.1 VIF_002163 ElaA protein 66036 66485 1
CDS - ZP_04411046.1 VIF_002164 permease 66488 66697 1
CDS - ZP_04411047.1 VIF_002165 transposase 66865 68397 1
CDS - ZP_04411048.1 VIF_002166 hypothetical protein 68663 69148 1
CDS - ZP_04411049.1 VIF_002167 hypothetical protein 69136 69228 -1
CDS - ZP_04411050.1 VIF_002168 permease 69180 69980 1
CDS - ZP_04411051.1 VIF_002169 hypothetical protein 69930 70502 -1
CDS - ZP_04411052.1 VIF_002170 FKBP-type peptidyl-prolyl cis-trans isomerase FklB 70713 71342 1
CDS - ZP_04411053.1 VIF_002171 hypothetical protein 71478 71960 1
CDS - ZP_04411054.1 VIF_002172 LSU ribosomal protein L17p 72103 72489 -1
CDS - ZP_04411055.1 VIF_002173 DNA-directed RNA polymerase alpha subunit 72516 73508 -1
CDS - ZP_04411056.1 VIF_002174 SSU ribosomal protein S4p (S9e) 73533 74153 -1
CDS - ZP_04411057.1 VIF_002175 SSU ribosomal protein S11p (S14e) 74181 74570 -1
CDS - ZP_04411058.1 VIF_002176 SSU ribosomal protein S13p (S18e) 74590 74946 -1
CDS - ZP_04411059.1 VIF_002177 LSU ribosomal protein L36p 75096 75209 -1
CDS - ZP_04411060.1 VIF_002178 preprotein translocase SecY subunit 75248 76582 -1
CDS - ZP_04411061.1 VIF_002179 LSU ribosomal protein L15p (L27Ae) 76603 77037 -1
CDS - ZP_04411062.1 VIF_002180 LSU ribosomal protein L30p (L7e) 77043 77219 -1
CDS - ZP_04411063.1 VIF_002181 SSU ribosomal protein S5p (S2e) 77226 77729 -1
CDS - ZP_04411064.1 VIF_002182 LSU ribosomal protein L18p (L5e) 77744 78097 -1
CDS - ZP_04411065.1 VIF_002183 LSU ribosomal protein L6p (L9e) 78107 78640 -1
CDS - ZP_04411066.1 VIF_002184 SSU ribosomal protein S8p (S15Ae) 78655 79047 -1
CDS - ZP_04411067.1 VIF_002185 SSU ribosomal protein S14p (S29e) 79077 79382 -1
CDS - ZP_04411068.1 VIF_002186 LSU ribosomal protein L5p (L11e) 79400 79939 -1
CDS - ZP_04411069.1 VIF_002187 LSU ribosomal protein L24p (L26e) 79964 80281 -1
CDS - ZP_04411070.1 VIF_002188 LSU ribosomal protein L14p (L23e) 80294 80665 -1
CDS - ZP_04411071.1 VIF_002189 SSU ribosomal protein S17p (S11e) 80828 81082 -1
CDS - ZP_04411072.1 VIF_002190 LSU ribosomal protein L29p (L35e) 81082 81276 -1
CDS - ZP_04411073.1 VIF_002191 LSU ribosomal protein L16p (L10e) 81273 81683 -1
CDS - ZP_04411074.1 VIF_002192 SSU ribosomal protein S3p (S3e) 81695 82396 -1
CDS - ZP_04411075.1 VIF_002193 LSU ribosomal protein L22p (L17e) 82416 82748 -1
CDS - ZP_04411076.1 VIF_002194 SSU ribosomal protein S19p (S15e) 82759 83037 -1
CDS - ZP_04411077.1 VIF_002195 LSU ribosomal protein L2p (L8e) 83058 83882 -1