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Vibrio cholerae TM 11079-80, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04411242.1 VIF_002362 hypothetical protein 247 339 -1
CDS - ZP_04411243.1 VIF_002363 hypothetical protein 287 3721 -1
CDS - ZP_04411244.1 VIF_002364 outer membrane receptor protein 3746 4606 -1
CDS - ZP_04411245.1 VIF_002365 ABC-type oligopeptide transport system ATPase component 4799 5620 -1
CDS - ZP_04411246.1 VIF_002366 oligopeptide transport ATP-binding protein OppD 5623 6489 -1
CDS - ZP_04411247.1 VIF_002367 ABC-type dipeptide transport system component 6506 8362 -1
CDS - ZP_04411248.1 VIF_002368 oligopeptide transport system permease protein OppC 8362 9405 -1
CDS - ZP_04411249.1 VIF_002369 ABC-type transport system permease component 9405 10427 -1
CDS - ZP_04411250.1 VIF_002370 orotidine 5'-phosphate decarboxylase 10852 11550 -1
CDS - ZP_04411251.1 VIF_002371 hypothetical protein 11624 12793 -1
CDS - ZP_04411252.1 VIF_002372 membrane protein 12805 13086 -1
CDS - ZP_04411253.1 VIF_002373 integration host factor beta subunit 13225 13503 -1
CDS - ZP_04411254.1 VIF_002374 SSU ribosomal protein S1p 13792 15462 -1
CDS - ZP_04411255.1 VIF_002375 cytidylate kinase 15571 16260 -1
CDS - ZP_04411256.1 VIF_002376 DNA uptake protein 16431 16742 -1
CDS - ZP_04411257.1 VIF_002377 peptidyl-prolyl cis-trans isomerase PpiD 16877 18736 -1
CDS - ZP_04411258.1 VIF_002378 DNA-binding protein HU-beta 18889 19161 -1
CDS - ZP_04411259.1 VIF_002379 ATP-dependent protease La Type I 19345 21705 -1
CDS - ZP_04411260.1 VIF_002380 ATP-dependent Clp protease ATP-binding subunit ClpX 21828 23108 -1
CDS - ZP_04411261.1 VIF_002384 cell division trigger factor 23920 25221 -1
CDS - ZP_04411262.1 VIF_002385 signal transduction histidine kinase regulating C4-dicarboxylate transport system 25720 27513 1
CDS - ZP_04411263.1 VIF_002386 C4-dicarboxylate transport transcriptional regulatory protein 27516 28856 1
CDS - ZP_04411264.1 VIF_002387 TRAP-type C4-dicarboxylate transport system large permease component 28972 30333 -1
CDS - ZP_04411265.1 VIF_002388 TRAP-type C4-dicarboxylate transport system small permease component 30337 30999 -1
CDS - ZP_04411266.1 VIF_002389 TRAP-type C4-dicarboxylate transport system component 31067 32065 -1
CDS - ZP_04411267.1 VIF_002390 hypothetical protein 32297 33766 -1
CDS - ZP_04411268.1 VIF_002391 hypothetical protein 33994 34164 -1
CDS - ZP_04411269.1 VIF_002392 hypothetical protein 34326 34796 1
CDS - ZP_04411270.1 VIF_002393 GGDEF family protein 34802 36727 1
CDS - ZP_04411271.1 VIF_002394 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 36806 37564 1
CDS - ZP_04411272.1 VIF_002395 phosphatidate cytidylyltransferase 37567 38499 1
CDS - ZP_04411273.1 VIF_002396 1-acyl-sn-glycerol-3-phosphate acyltransferase 38507 39178 1
CDS - ZP_04411274.1 VIF_002397 hypothetical protein 39268 39717 1
CDS - ZP_04411275.1 VIF_002398 hypothetical protein 39774 39872 -1
CDS - ZP_04411276.1 VIF_002399 hypothetical protein 40011 40631 1
CDS - ZP_04411277.1 VIF_002400 phosphoserine phosphatase 40678 41340 -1
tRNA - - VIF_rna082 tRNA-Arg 43298 43374 -1
CDS - ZP_04411278.1 VIF_002403 methylenetetrahydrofolate dehydrogenase (NADP+)/methenyltetrahydrofolate cyclohydrolase 43507 44436 1
CDS - ZP_04411279.1 VIF_002404 PvcB protein 44730 45593 1
CDS - ZP_04411280.1 VIF_002405 FAD monooxygenase PheA/TfdB family 45578 47041 1
CDS - ZP_04411281.1 VIF_002406 transcriptional regulator LysR family 47172 48062 -1
CDS - ZP_04411282.1 VIF_002407 PvcA protein related to known isonitrile synthases 48421 50247 1
CDS - ZP_04411283.1 VIF_002408 biotin sulfoxide reductase 50337 52784 -1
CDS - ZP_04411284.1 VIF_002409 cytochrome c-type protein TorY 52807 53913 -1
CDS - ZP_04411285.1 VIF_002410 nucleoside permease NupC 54069 55286 -1
CDS - ZP_04411286.1 VIF_002411 transcriptional regulator 55616 56563 -1
CDS - ZP_04411287.1 VIF_002412 membrane-bound lytic murein transglycosylase B 56727 57698 -1
CDS - ZP_04411288.1 VIF_002413 protein YcgL 57723 58001 -1
CDS - ZP_04411289.1 VIF_002414 hypothetical protein 58062 58187 1
CDS - ZP_04411290.1 VIF_002415 septum site-determining protein MinC 58201 58863 1
CDS - ZP_04411291.1 VIF_002416 septum site-determining protein MinD 58866 59696 1
CDS - ZP_04411292.1 VIF_002417 cell division topological specificity factor MinE 59701 59964 1
CDS - ZP_04411293.1 VIF_002418 lipoprotein 60253 60744 1
CDS - ZP_04411294.1 VIF_002419 hypothetical protein 60826 61200 -1
CDS - ZP_04411295.1 VIF_002420 hypothetical protein 61306 62181 -1
CDS - ZP_04411296.1 VIF_002421 transcriptional regulator 62375 62965 1
CDS - ZP_04411297.1 VIF_002422 1-acyl-sn-glycerol-3-phosphate acyltransferase 62969 64849 1
CDS - ZP_04411298.1 VIF_002423 methyl-accepting chemotaxis protein 65025 65513 1
CDS - ZP_04411299.1 VIF_002424 methyl-accepting chemotaxis protein 65588 67078 1
CDS - ZP_04411300.1 VIF_002425 transcriptional regulator YidN, Cro/CI family 67131 67676 -1
CDS - ZP_04411301.1 VIF_002426 hypothetical protein 67767 68930 1
CDS - ZP_04411302.1 VIF_002427 O-succinylbenzoic acid--CoA ligase 68962 70392 -1
CDS - ZP_04411303.1 VIF_002428 O-succinylbenzoate-CoA synthase 70368 71366 -1
CDS - ZP_04411304.1 VIF_002429 naphthoate synthase 71455 72333 -1
CDS - ZP_04411305.1 VIF_002430 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 72346 73137 -1
CDS - ZP_04411306.1 VIF_002431 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase 73127 74839 -1
CDS - ZP_04411307.1 VIF_002432 menaquinone-specific isochorismate synthase 74836 76143 -1
CDS - ZP_04411308.1 VIF_002433 aspartate/tyrosine/aromatic aminotransferase 76358 77572 1
CDS - ZP_04411309.1 VIF_002434 hypothetical protein 77725 78309 1
CDS - ZP_04411310.1 VIF_002435 deoxyguanosinetriphosphate triphosphohydrolase 78492 79817 1
CDS - ZP_04411311.1 VIF_002436 hypothetical protein 79811 80413 -1
CDS - ZP_04411312.1 VIF_002437 membrane protein 80315 80974 1
CDS - ZP_04411313.1 VIF_002438 ribonuclease D 81082 82227 -1
CDS - ZP_04411314.1 VIF_002439 long-chain-fatty-acid--CoA ligase 82313 84013 -1
CDS - ZP_04411315.1 VIF_002440 hypothetical protein 84138 84992 -1
CDS - ZP_04411316.1 VIF_002441 starvation lipoprotein Slp like protein 84989 85585 -1
CDS - ZP_04411317.1 VIF_002442 chromosome segregation ATPase 85563 85868 -1
CDS - ZP_04411318.1 VIF_002443 hypothetical protein 85928 86641 -1
CDS - ZP_04411319.1 VIF_002444 DinG family ATP-dependent helicase YoaA 86638 88650 -1
CDS - ZP_04411320.1 VIF_002445 hypothetical protein 88670 88873 -1
CDS - ZP_04411321.1 VIF_002446 formyltetrahydrofolate deformylase 89143 89976 1
CDS - ZP_04411322.1 VIF_002447 2,4-dienoyl-CoA reductase [NADPH] 90049 92049 -1
CDS - ZP_04411323.1 VIF_002448 protease IV 92279 94129 1
CDS - ZP_04411324.1 VIF_002449 L-asparaginase 94246 95259 1
CDS - ZP_04411325.1 VIF_002450 hypothetical protein 95356 95643 -1
CDS - ZP_04411326.1 VIF_002451 hypothetical protein 95747 96571 1
CDS - ZP_04411327.1 VIF_002453 peptide methionine sulfoxide reductase MsrB 96732 97175 -1
CDS - ZP_04411328.1 VIF_002454 hypothetical protein 97181 97327 1
CDS - ZP_04411329.1 VIF_002455 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase 97475 98470 1
CDS - ZP_04411330.1 VIF_002456 aldose 1-epimerase-related protein 98618 99508 1
CDS - ZP_04411331.1 VIF_002457 hypothetical protein 99942 100946 1
CDS - ZP_04411332.1 VIF_002458 rRNA (guanine-N1-)-methyltransferase 101085 101918 1
CDS - ZP_04411333.1 VIF_002459 uncharacterized iron-regulated protein 101981 102916 1
CDS - ZP_04411334.1 VIF_002460 hypothetical protein 103056 103412 1
CDS - ZP_04411335.1 VIF_002461 chemotaxis protein CheV 103486 104430 -1
CDS - ZP_04411336.1 VIF_002462 Mlc transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon 104535 105752 -1
CDS - ZP_04411337.1 VIF_002463 pyruvate kinase 106197 107642 1
CDS - ZP_04411338.1 VIF_002464 hypothetical protein 107684 108853 -1
CDS - ZP_04411339.1 VIF_002465 hypothetical protein 108860 108985 -1
CDS - ZP_04411340.1 VIF_002466 hypothetical protein 109085 109675 1