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Vibrio cholerae TM 11079-80, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04411646.1 VIF_002774 transposase 1 399 1
CDS - ZP_04411647.1 VIF_002775 PTS system sucrose-specific IIB component/PTS system sucrose-specific IIC component 524 1963 -1
CDS - ZP_04411648.1 VIF_002776 sucrose operon repressor ScrR LacI family 2264 3256 1
CDS - ZP_04411649.1 VIF_002777 sucrose-6-phosphate hydrolase 3332 4972 1
CDS - ZP_04411650.1 VIF_002778 fructokinase 5100 6071 -1
CDS - ZP_04411651.1 VIF_002779 aerobic glycerol-3-phosphate dehydrogenase 6418 7956 1
CDS - ZP_04411652.1 VIF_002780 methyl-accepting chemotaxis protein 8058 9668 -1
CDS - ZP_04411653.1 VIF_002781 protein F-related protein 9854 10468 -1
CDS - ZP_04411654.1 VIF_002782 FKBP-type peptidyl-prolyl cis-trans isomerase/macrophage infectivity potentiator 10690 11163 1
CDS - ZP_04411655.1 VIF_002783 hypothetical protein 11244 11882 -1
CDS - ZP_04411656.1 VIF_002787 anaerobic C4-dicarboxylate transporter DcuC 14160 15539 1
CDS - ZP_04411657.1 VIF_002788 L-serine dehydratase 15637 17082 -1
CDS - ZP_04411658.1 VIF_002789 nitrate/nitrite response regulator protein 17223 17846 -1
CDS - ZP_04411659.1 VIF_002790 nitrate/nitrite sensor protein 17836 19587 -1
CDS - ZP_04411660.1 VIF_002791 nitrate reductase 19735 20250 1
CDS - ZP_04411661.1 VIF_002792 periplasmic nitrate reductase component NapD 20256 20597 1
CDS - ZP_04411662.1 VIF_002793 periplasmic nitrate reductase precursor 20594 23083 1
CDS - ZP_04411663.1 VIF_002794 nitrate reductase cytochrome c550-type subunit 23150 23605 1
CDS - ZP_04411664.1 VIF_002795 cytochrome c-type protein NapC 23623 24198 1
CDS - ZP_04411665.1 VIF_002796 hypothetical protein 24210 24338 1
CDS - ZP_04411666.1 VIF_002797 HDIG domain protein 24380 25567 -1
CDS - ZP_04411667.1 VIF_002798 transposase 25710 27032 1
CDS - ZP_04411668.1 VIF_002799 transcriptional regulatory protein UhpA 27272 27898 1
CDS - ZP_04411669.1 VIF_002800 sensor histidine protein kinase UhpB glucose-6-phosphate specific 27901 29484 1
CDS - ZP_04411670.1 VIF_002801 hexose phosphate uptake regulatory protein UhpC 29552 30862 1
CDS - ZP_04411671.1 VIF_002802 ABC transporter of unknown compound (not Fe3+) substrate-binding protein 30975 32009 1
CDS - ZP_04411672.1 VIF_002803 ABC transporter of unknown compound (not Fe3+) permease protein 32113 34215 1
CDS - ZP_04411673.1 VIF_002804 ABC transporter of unknown compound (not Fe3+) ATP-binding protein 34227 35282 1
CDS - ZP_04411674.1 VIF_002805 polyhydroxyalkanoic acid synthase 35368 37143 -1
CDS - ZP_04411675.1 VIF_002806 hypothetical protein 37201 37548 -1
CDS - ZP_04411676.1 VIF_002807 3-ketoacyl-CoA thiolase 37578 38783 -1
CDS - ZP_04411677.1 VIF_002808 acetoacetyl-CoA reductase 38796 39536 -1
CDS - ZP_04411678.1 VIF_002809 protein-export membrane protein SecF 40203 41105 -1
CDS - ZP_04411679.1 VIF_002810 protein-export membrane protein SecD 41109 42947 -1
CDS - ZP_04411680.1 VIF_002811 hypothetical protein 43019 43474 -1
CDS - ZP_04411681.1 VIF_002812 SH3 domain protein 43551 44252 -1
CDS - ZP_04411682.1 VIF_002813 sensory box/GGDEF family protein 44581 46509 1
CDS - ZP_04411683.1 VIF_002814 glucose-1-phosphate adenylyltransferase 46812 48050 1
CDS - ZP_04411684.1 VIF_002815 chitodextrinase precursor 48157 51312 -1
CDS - ZP_04411685.1 VIF_002816 iron-containing alcohol dehydrogenase 51984 53132 1
CDS - ZP_04411686.1 VIF_002817 hypothetical protein 53211 53888 1
CDS - ZP_04411687.1 VIF_002818 phosphoglycerate transport system transcriptional regulatory protein PgtA 53885 55177 -1
CDS - ZP_04411688.1 VIF_002819 signal transduction histidine kinase 55122 57491 -1
CDS - ZP_04411689.1 VIF_002820 phosphoglycerate transport regulatory protein PgtC 57488 58780 -1
CDS - ZP_04411690.1 VIF_002821 phosphoglycerate transporter protein 59056 60435 1
CDS - ZP_04411691.1 VIF_002822 pyruvate kinase 60516 61976 1
CDS - ZP_04411692.1 VIF_002823 sensor protein TorS 62096 65050 -1
CDS - ZP_04411693.1 VIF_002824 periplasmic protein TorT precursor 65081 66130 1
CDS - ZP_04411694.1 VIF_002825 methylglyoxal synthase 66185 66640 1
CDS - ZP_04411695.1 VIF_002826 nicotinamidase 66723 67343 -1
CDS - ZP_04411696.1 VIF_002827 hypothetical protein 67465 67581 -1
CDS - ZP_04411697.1 VIF_002828 diacylglycerol kinase 67648 68025 1
CDS - ZP_04411698.1 VIF_002829 DNA helicase IV 68230 70329 -1
CDS - ZP_04411699.1 VIF_002830 membrane protein 70480 72657 1
CDS - ZP_04411700.1 VIF_002833 guanylate cyclase-related protein 73611 74156 -1
CDS - ZP_04411701.1 VIF_002834 hypothetical protein 74401 74625 1
CDS - ZP_04411702.1 VIF_002835 hypothetical protein 74682 74972 1
CDS - ZP_04411703.1 VIF_002836 hydroxymethylglutaryl-CoA reductase 75002 76312 1
CDS - ZP_04411704.1 VIF_002837 molybdenum transport ATP-binding protein ModC 76418 77518 -1
CDS - ZP_04411705.1 VIF_002838 molybdenum transport system permease protein ModB 77532 78227 -1
CDS - ZP_04411706.1 VIF_002839 molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA 78231 78995 -1
CDS - ZP_04411707.1 VIF_002842 protein kinase 80753 81820 -1
CDS - ZP_04411708.1 VIF_002843 protein kinase 81817 82896 -1
CDS - ZP_04411709.1 VIF_002844 protein phosphatase 2C domain protein 82844 84028 -1
CDS - ZP_04411710.1 VIF_002845 hypothetical protein 84484 84789 -1
CDS - ZP_04411711.1 VIF_002846 hypothetical protein 84971 85390 1
CDS - ZP_04411712.1 VIF_002847 hypothetical protein 85628 86146 1
CDS - ZP_04411713.1 VIF_002848 hypothetical protein 86168 86260 1
CDS - ZP_04411714.1 VIF_002849 hypothetical protein 86350 87015 1
CDS - ZP_04411715.1 VIF_002850 autoinducer 2 sensor kinase/phosphatase LuxQ 87007 89580 -1
CDS - ZP_04411716.1 VIF_002851 autoinducer 2-binding periplasmic protein LuxP precursor 89598 90692 -1
CDS - ZP_04411717.1 VIF_002852 TraF protein 90904 92064 -1
CDS - ZP_04411718.1 VIF_002853 putative endonuclease containing a URI domain 92166 92471 -1
CDS - ZP_04411719.1 VIF_002854 hypothetical protein 92471 93121 -1
CDS - ZP_04411720.1 VIF_002855 hypothetical protein 93163 93360 -1
CDS - ZP_04411721.1 VIF_002856 hypothetical protein 93548 93868 1
CDS - ZP_04411722.1 VIF_002857 hypothetical protein 94280 94531 1
CDS - ZP_04411723.1 VIF_002858 glycerol kinase 94611 96128 -1
CDS - ZP_04411724.1 VIF_002859 glycerol uptake facilitator protein 96258 97112 -1
CDS - ZP_04411725.1 VIF_002860 hypothetical protein 97450 97611 -1
CDS - ZP_04411726.1 VIF_002861 anaerobic glycerol-3-phosphate dehydrogenase subunit A 97767 99410 1
CDS - ZP_04411727.1 VIF_002862 anaerobic glycerol-3-phosphate dehydrogenase subunit B 99407 100717 1
CDS - ZP_04411728.1 VIF_002863 anaerobic glycerol-3-phosphate dehydrogenase subunit C 100714 101955 1
CDS - ZP_04411729.1 VIF_002864 3-oxoacyl-[acyl-carrier-protein] synthase KASIII 102096 103307 -1
CDS - ZP_04411730.1 VIF_002865 thioredoxin 2 103353 103787 1
CDS - ZP_04411731.1 VIF_002866 permease 103976 105130 1
CDS - ZP_04411732.1 VIF_002867 lipase-related protein 105257 106045 1
tRNA - - VIF_rna102 tRNA-Cys 106078 106151 -1
tRNA - - VIF_rna103 tRNA-Leu 106176 106262 -1
CDS - ZP_04411733.1 VIF_002868 arginine ABC transporter permease protein ArtM 106447 107115 -1
CDS - ZP_04411734.1 VIF_002869 arginine ABC transporter permease protein ArtQ 107112 107801 -1
CDS - ZP_04411735.1 VIF_002870 arginine ABC transporter periplasmic arginine-binding protein ArtI 107803 108573 -1
CDS - ZP_04411736.1 VIF_002871 arginine ABC transporter ATP-binding protein ArtP 108608 109351 -1
tRNA - - VIF_rna104 tRNA-Cys 109632 109705 -1
CDS - ZP_04411737.1 VIF_002872 hypothetical protein 109790 109888 1
CDS - ZP_04411738.1 VIF_002873 hypothetical protein 109929 111374 -1
CDS - ZP_04411739.1 VIF_002874 hypothetical protein 111383 113041 -1
CDS - ZP_04411740.1 VIF_002875 ADP-ribose pyrophosphatase 113393 113908 1
CDS - ZP_04411741.1 VIF_002876 low-specificity L-threonine aldolase 113917 114924 1
CDS - ZP_04411742.1 VIF_002877 cytochrome c553 115051 115362 1