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Vibrio cholerae TM 11079-80, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04412561.1 VIF_000008 hypothetical protein 1738 1836 -1
CDS - ZP_04412562.1 VIF_000009 hypothetical protein 1910 2347 -1
CDS - ZP_04412563.1 VIF_000010 hypothetical protein 2486 2737 1
CDS - ZP_04412564.1 VIF_000011 recombination protein RecR 2846 3448 -1
CDS - ZP_04412565.1 VIF_000012 transcriptional regulatory protein 3463 3825 -1
CDS - ZP_04412566.1 VIF_000013 DNA polymerase III subunits gamma and tau 3863 5941 -1
CDS - ZP_04412567.1 VIF_000014 adenine phosphoribosyltransferase 5960 6505 -1
CDS - ZP_04412568.1 VIF_000015 hypothetical protein 6637 7035 -1
CDS - ZP_04412569.1 VIF_000016 hypothetical protein 7035 7166 -1
CDS - ZP_04412570.1 VIF_000017 response regulator 7336 8433 -1
CDS - ZP_04412571.1 VIF_000018 transcriptional regulator 8675 9550 1
CDS - ZP_04412572.1 VIF_000019 hypothetical protein 9627 10175 -1
CDS - ZP_04412573.1 VIF_000020 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase 10302 12476 -1
CDS - ZP_04412574.1 VIF_000021 3-ketoacyl-CoA thiolase 12428 13798 -1
CDS - ZP_04412575.1 VIF_000022 RNA polymerase sigma-70 factor ECF subfamily 14340 14846 1
CDS - ZP_04412576.1 VIF_000023 hypothetical protein 14839 15570 1
CDS - ZP_04412577.1 VIF_000024 long-chain fatty acid transport protein 15830 17089 1
CDS - ZP_04412578.1 VIF_000025 long-chain fatty acid transport protein 17392 18663 1
CDS - ZP_04412579.1 VIF_000026 low molecular weight protein tyrosine phosphatase 18690 19157 -1
CDS - ZP_04412580.1 VIF_000027 cob(I)alamin adenosyltransferase 19039 19848 1
CDS - ZP_04412581.1 VIF_000028 AsmA protein 19920 22169 -1
CDS - ZP_04412582.1 VIF_000029 uridine kinase [C1] 22129 22788 -1
CDS - ZP_04412583.1 VIF_000030 Mrp protein 22947 24095 -1
CDS - ZP_04412584.1 VIF_000031 methionyl-tRNA synthetase 24256 26232 1
CDS - ZP_04412585.1 VIF_000032 hypothetical protein 26503 27351 1
CDS - ZP_04412586.1 VIF_000033 uridine phosphorylase 27424 28185 -1
CDS - ZP_04412587.1 VIF_000034 lead cadmium zinc and mercury transporting ATPase 28646 30952 -1
CDS - ZP_04412588.1 VIF_000035 inosine monophosphate dehydrogenase-related protein 31065 31505 -1
CDS - ZP_04412589.1 VIF_000036 GGDEF family protein 31710 32684 1
CDS - ZP_04412590.1 VIF_000037 molybdenum cofactor biosynthesis protein E 32690 33151 -1
CDS - ZP_04412591.1 VIF_000038 molybdenum cofactor biosynthesis protein D 33153 33398 -1
CDS - ZP_04412592.1 VIF_000039 molybdenum cofactor biosynthesis protein C 33395 33877 -1
CDS - ZP_04412593.1 VIF_000040 molybdenum cofactor biosynthesis protein B 33885 34397 -1
CDS - ZP_04412594.1 VIF_000041 molybdenum cofactor biosynthesis protein A 34457 35461 -1
CDS - ZP_04412595.1 VIF_000042 hypothetical protein 35753 36643 1
CDS - ZP_04412596.1 VIF_000043 phosphorelay protein LuxU 36632 36973 -1
CDS - ZP_04412597.1 VIF_000044 regulatory protein LuxO 36977 38344 -1
CDS - ZP_04412598.1 VIF_000045 excinuclease ABC subunit B 38775 40805 -1
tRNA - - VIF_rna001 tRNA-Asn 41392 41467 1
CDS - ZP_04412599.1 VIF_000046 electron transport complex protein RnfA 41654 42268 1
CDS - ZP_04412600.1 VIF_000047 electron transport complex protein RnfB 42268 42855 1
CDS - ZP_04412601.1 VIF_000048 electron transport complex protein RnfC 42783 45425 1
CDS - ZP_04412602.1 VIF_000049 electron transport complex protein RnfD 45425 46471 1
CDS - ZP_04412603.1 VIF_000050 electron transport complex protein RnfG 46483 47112 1
CDS - ZP_04412604.1 VIF_000051 electron transport complex protein RnfE 46973 47806 1
CDS - ZP_04412605.1 VIF_000052 endonuclease III 47833 48474 1
CDS - ZP_04412606.1 VIF_000053 lactoylglutathione lyase 48377 48931 1
CDS - ZP_04412607.1 VIF_000054 hypothetical protein 49093 49530 1
CDS - ZP_04412608.1 VIF_000055 sodium-type flagellar protein MotY precursor 49579 50463 -1
CDS - ZP_04412609.1 VIF_000056 hypothetical protein 50524 50667 1
CDS - ZP_04412610.1 VIF_000057 ribonuclease T 50737 51411 1
CDS - ZP_04412611.1 VIF_000058 Na+/H+ antiporter family protein 51512 52837 1
CDS - ZP_04412612.1 VIF_000059 amidophosphoribosyltransferase 52964 54478 -1
CDS - ZP_04412613.1 VIF_000060 bacteriocin production protein 54511 55002 -1
CDS - ZP_04412614.1 VIF_000061 DedD protein 55065 55661 -1
CDS - ZP_04412615.1 VIF_000062 dihydrofolate synthase/folylpolyglutamate synthase 55662 56927 -1
CDS - ZP_04412616.1 VIF_000063 acetyl-coenzyme A carboxyl transferase beta chain 56972 57898 -1
CDS - ZP_04412617.1 VIF_000064 tRNA pseudouridine synthase A 58072 58866 -1
CDS - ZP_04412618.1 VIF_000065 AAA ATPase 58988 63658 -1
CDS - ZP_04412619.1 VIF_000066 glutaminyl-tRNA synthetase 63886 65556 -1
CDS - ZP_04412620.1 VIF_000067 hypothetical protein 65574 65675 -1
CDS - ZP_04412621.1 VIF_000068 PTS system N-acetylglucosamine-specific IIB component/PTS system N-acetylglucosamine-specific IIC component 65804 67375 -1
CDS - ZP_04412622.1 VIF_000069 N-acetylglucosamine-6-phosphate deacetylase 67844 68980 1
CDS - ZP_04412623.1 VIF_000070 N-acetylglucosamine-6P-responsive transcriptional repressor NagC ROK family 68977 70197 1
CDS - ZP_04412624.1 VIF_000071 hypothetical protein 70292 71878 1
CDS - ZP_04412625.1 VIF_000072 asparagine synthetase [glutamine-hydrolyzing] 72074 73738 1
CDS - ZP_04412626.1 VIF_000073 transcriptional activator RfaH 73902 74399 -1
CDS - ZP_04412627.1 VIF_000074 proton/peptide symporter family protein 74902 76389 1
CDS - ZP_04412628.1 VIF_000075 hypothetical protein 76393 76503 1
CDS - ZP_04412629.1 VIF_000076 ferrochelatase protoheme ferro-lyase 76487 77461 -1
CDS - ZP_04412630.1 VIF_000077 adenylate kinase 77576 78220 -1
CDS - ZP_04412631.1 VIF_000078 chaperone protein HtpG 78552 80498 -1
CDS - ZP_04412632.1 VIF_000079 transcriptional activator ToxR 80687 81571 1
CDS - ZP_04412633.1 VIF_000080 transmembrane regulatory protein ToxS 81581 82102 1
CDS - ZP_04412634.1 VIF_000081 selenoprotein W-related protein 82143 82436 1
CDS - ZP_04412635.1 VIF_000082 phosphodiesterase YfcE 82513 83082 -1
CDS - ZP_04412636.1 VIF_000083 hypothetical protein 83475 84389 1
CDS - ZP_04412637.1 VIF_000084 oxidoreductase short-chain dehydrogenase/reductase family 84432 85259 1
CDS - ZP_04412638.1 VIF_000085 hypothetical protein 85334 85450 1
CDS - ZP_04412639.1 VIF_000086 thioredoxin domain-containing protein 85661 86542 1
CDS - ZP_04412640.1 VIF_000087 hypothetical protein 86974 87894 1
CDS - ZP_04412641.1 VIF_000088 hypothetical protein 87821 88351 1
CDS - ZP_04412642.1 VIF_000089 HTH-type transcriptional regulator CueR 88395 88814 -1
CDS - ZP_04412643.1 VIF_000090 VvgS protein 88875 89636 -1
CDS - ZP_04412644.1 VIF_000091 outer membrane porin protein 89709 90707 -1
CDS - ZP_04412645.1 VIF_000092 DNA ligase 91339 93348 -1
CDS - ZP_04412646.1 VIF_000093 cell division protein ZipA 93481 94347 -1
CDS - ZP_04412647.1 VIF_000094 hypothetical protein 94282 94380 1
CDS - ZP_04412648.1 VIF_000095 sulfate transporter CysZ-type 94577 95329 1
CDS - ZP_04412649.1 VIF_000096 cysteine synthase 95452 96420 1
CDS - ZP_04412650.1 VIF_000097 phosphocarrier protein of PTS system 96718 96975 1
CDS - ZP_04412651.1 VIF_000100 PTS system glucose-specific IIA component 98941 99450 1
CDS - ZP_04412652.1 VIF_000101 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 99575 100768 -1
CDS - ZP_04412653.1 VIF_000102 tRNA-i(6)A37 methylthiotransferase 100992 102416 1
CDS - ZP_04412654.1 VIF_000103 phosphate starvation-inducible protein PhoH 102484 103587 1
CDS - ZP_04412655.1 VIF_000104 hypothetical protein 103584 104048 1
CDS - ZP_04412656.1 VIF_000105 magnesium and cobalt efflux protein CorC 104118 104993 1
CDS - ZP_04412657.1 VIF_000106 apolipoprotein N-acyltransferase/copper homeostasis protein CutE 105034 106551 1
CDS - ZP_04412658.1 VIF_000107 hypothetical protein 106607 107077 -1
CDS - ZP_04412659.1 VIF_000108 leucyl-tRNA synthetase 107147 109783 1