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Vibrio fischeri ES114 chromosome I, complete genome. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS mioC YP_203384.1 VF_0001 flavodoxin 313 747 -1
CDS trmE YP_203385.1 VF_0002 tRNA modification GTPase TrmE 817 2184 -1
CDS yidC YP_203386.1 VF_0003 putative inner membrane protein translocase component YidC 2281 3906 -1
CDS rnpA YP_203387.1 VF_0004 ribonuclease P 4133 4486 -1
CDS rpmH YP_203388.1 VF_0005 50S ribosomal protein L34 4502 4636 -1
CDS yecC YP_203389.1 VF_0006 cystine transport ATP-binding protein 4822 5559 -1
CDS yecS YP_203390.1 VF_0007 cystine transport system permease protein 5556 6227 -1
CDS fliY YP_203391.1 VF_0008 cystine-binding protein 6352 7104 -1
CDS dnaA YP_203392.1 VF_0009 chromosomal replication initiation protein 7401 8810 1
CDS dnaN YP_203393.1 VF_0010 DNA polymerase III subunit beta 8843 9943 1
CDS recF YP_203394.1 VF_0011 recombination protein F 9957 11036 1
CDS gyrB YP_203395.1 VF_0012 DNA gyrase subunit B 11054 13471 1
CDS ibpA YP_203396.1 VF_0013 heat shock chaperone 13895 14329 1
CDS avtA YP_203397.1 VF_0014 valine--pyruvate transaminase 14539 15786 -1
CDS glyQ YP_203398.1 VF_0015 glycyl-tRNA synthetase subunit alpha 16015 16935 1
CDS glyS YP_203399.1 VF_0016 glycyl-tRNA synthetase subunit beta 16938 19004 1
CDS malS YP_203400.1 VF_0017 alpha-amylase 19150 20790 1
CDS - YP_203401.1 VF_0018 NADH dehydrogenase subunit II-related protein 20925 21176 1
CDS tusA YP_203402.1 VF_0019 sulfur transfer protein SirA 21222 21473 -1
CDS - YP_203403.1 VF_0020 hypothetical protein 21659 21850 1
CDS - YP_203404.1 VF_0021 LysR family transcriptional regulator 21997 22938 1
CDS yiaA YP_203405.1 VF_0022 inner membrane protein 23063 23509 1
CDS yhdH YP_203406.1 VF_0023 oxidoreductase, Zn-dependent and NAD(P)-binding 23656 24636 -1
CDS fadA YP_203407.3 VF_0024 3-ketoacyl-CoA thiolase 25396 26625 -1
CDS fadB YP_203408.1 VF_0025 multifunctional fatty acid oxidation complex subunit alpha 26573 28750 -1
CDS yigZ YP_203409.1 VF_0026 elongation factor 28993 29610 1
CDS trkH YP_203410.1 VF_0027 potassium transporter 29667 31124 1
CDS hemG YP_203411.1 VF_0028 protoporphyrinogen oxidase 31157 31681 1
tRNA - - VF_T0001 tRNA-Trp 31800 31876 1
CDS pqqL YP_203412.1 VF_0029 zinc protease 32310 35063 1
CDS - YP_203413.1 VF_0030 hypothetical protein 35144 35338 1
CDS - YP_203414.1 VF_0031 chloride channel protein 35637 37016 1
CDS thiC YP_203415.1 VF_0032 thiamine biosynthesis protein ThiC 37617 39551 1
CDS thiE YP_203416.1 VF_0033 thiamin phosphate synthase (thiamin phosphate pyrophosphorylase) 39622 40281 1
CDS thiF YP_203417.1 VF_0034 thiamin (thiazole moiety) biosynthesis protein 40274 41107 1
CDS thiS YP_001816656.1 VF_2576 sulfur carrier protein ThiS 41100 41312 1
CDS thiG YP_203418.1 VF_0035 thiazole synthase 41314 42084 1
CDS thiH YP_203419.1 VF_0036 thiamine biosynthesis protein ThiH 42095 43210 1
CDS - YP_203420.1 VF_0037 beta-N-acetylhexosaminidase 43328 45775 -1
CDS - YP_203421.1 VF_0038 Xaa-Pro aminopeptidase 46035 47828 -1
CDS yidZ YP_203423.2 VF_0040 LysR family transcriptional regulator 47933 48898 -1
CDS mdtL YP_203424.1 VF_0041 multidrug efflux system protein 48996 50225 1
CDS - YP_203425.1 VF_0042 hypothetical protein 50347 50637 1
CDS - YP_203426.1 VF_0043 drug/metabolite exporter family protein 50759 51688 -1
CDS rmuC YP_203427.2 VF_0044 recombination limiting protein 51789 53309 1
CDS ubiE YP_203429.1 VF_0046 ubiquinone/menaquinone biosynthesis methyltransferase 53367 54131 1
CDS yigP YP_203430.1 VF_0047 hypothetical protein 54143 54766 1
CDS ubiB YP_203431.1 VF_0048 putative ubiquinone biosynthesis protein UbiB 54763 56397 1
CDS tatA YP_203432.1 VF_0049 twin arginine translocase protein A 56449 56697 1
CDS tatB YP_203433.1 VF_0050 sec-independent translocase 56701 57081 1
CDS tatC YP_203434.1 VF_0051 TatABCE protein translocation system subunit 57084 57839 1
CDS tatD YP_203435.1 VF_0052 DNase, TatD family 59230 59991 -1
CDS hemB YP_203436.1 VF_0053 delta-aminolevulinic acid dehydratase 60143 61159 1
CDS gpp YP_203437.1 VF_0054 guanosine pentaphosphate phosphohydrolase 61453 62946 -1
CDS rhlB YP_203439.2 VF_0056 ATP-dependent RNA helicase RhlB 62980 64278 -1
CDS trxA YP_203440.1 VF_0057 thioredoxin 64391 64717 1
CDS rho YP_203441.1 VF_0058 transcription termination factor Rho 64957 66216 1
CDS - YP_203442.1 VF_0059 hypothetical protein 66374 67369 1
CDS ubiD YP_203443.1 VF_0060 3-octaprenyl-4-hydroxybenzoate decarboxylase 67471 69315 1
CDS - YP_203444.1 VF_0061 phenol hydroxylase P5 protein 69479 69742 1
CDS fre YP_203445.1 VF_0062 FMN reductase 69839 70549 1
CDS hemY YP_203446.1 VF_0063 protoheme IX synthesis protein 70627 71811 -1
CDS hemX YP_203447.1 VF_0064 uroporphyrinogen III methylase 71808 72980 -1
CDS hemD YP_203448.1 VF_0065 uroporphyrinogen III synthase 72977 73738 -1
CDS hemC YP_203449.1 VF_0066 porphobilinogen deaminase 73741 74676 -1
CDS cyaA YP_203450.3 VF_0067 adenylate cyclase 75012 77459 1
CDS uvrD YP_203451.1 VF_0068 DNA-dependent helicase II 77544 79745 1
CDS rarD YP_203452.1 VF_0069 chloramphenical resistance permease 80164 81279 -1
CDS recQ YP_203453.1 VF_0070 ATP-dependent DNA helicase RecQ 81298 83133 1
CDS - YP_203454.1 VF_0071 hypothetical protein 83137 83427 1
CDS glpT YP_203455.1 VF_0072 sn-glycerol-3-phosphate transporter 83482 84846 -1
CDS yhhQ YP_203456.1 VF_0073 hypothetical protein 85190 85861 1
CDS polA YP_203457.1 VF_0074 DNA polymerase I 86562 89360 1
CDS engB YP_203458.1 VF_0075 ribosome biogenesis GTP-binding protein YsxC 90085 90732 -1
CDS cycA YP_203459.1 VF_0076 cytochrome c4 91021 91638 1
CDS - YP_203460.1 VF_0077 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase 91793 92434 1
CDS yihI YP_203461.1 VF_0078 hypothetical protein 92434 92979 1
CDS - YP_203462.1 VF_0079 putative coproporphyrinogen III oxidase 92982 93473 1
CDS hemN YP_203463.1 VF_0080 coproporphyrinogen III oxidase 93582 94955 1
CDS asnC YP_203464.1 VF_0081 DNA-binding transcriptional regulator AsnC 95145 95606 -1
CDS yhiQ YP_203465.1 VF_0082 SAM-dependent methyltransferase 95747 96526 1
CDS uspA YP_203466.1 VF_0083 universal stress global response regulator 96523 96948 -1
CDS ftnA YP_203467.1 VF_0084 ferritin iron storage protein (cytoplasmic) 97131 97658 1
CDS uspB YP_203468.1 VF_0085 universal stress protein UspB 97739 98092 1
CDS yhiN YP_203469.1 VF_0086 oxidoreductase 98141 99325 1
CDS - YP_203470.1 VF_0087 sensory transduction protein kinase 99442 101937 1
CDS - YP_203471.1 VF_0088 putative cytoplasmic protein 101927 102526 -1
CDS - YP_203472.1 VF_0089 hypothetical protein 102526 103536 -1
CDS eda YP_203473.1 VF_0090 multifunctional 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase and oxaloacetate decarboxylase 103693 104328 1
CDS - YP_203474.2 VF_0091 GGDEF domain-containing protein 104345 106810 -1
CDS - YP_203475.2 VF_2580 hypothetical protein 106809 107000 1
CDS add YP_203476.2 VF_0093 adenosine deaminase 107132 108133 -1
CDS - YP_203477.1 VF_0094 GGDEF domain-containing protein 108298 110856 -1
CDS ntrC YP_203478.1 VF_0095 fused DNA-binding response regulator in two-component regulatory system with NtrB: nitrogen regulatory response regulator/sigma54 interaction protein 110973 112376 -1
CDS glnL YP_203479.1 VF_0096 nitrogen regulation protein NR(II) 112415 113473 -1
CDS - YP_203480.1 VF_0097 hypothetical protein 113550 114086 -1
CDS glnA YP_203481.1 VF_0098 glutamine synthetase 114336 115745 -1
CDS typA YP_203482.1 VF_0099 GTP-binding protein 116283 118115 1
CDS rbn YP_203483.1 VF_0100 ribonuclease BN 118412 119344 1
CDS dtd YP_203484.1 VF_0101 D-tyrosyl-tRNA(Tyr) deacylase 119316 119750 1