xBASE Logo
About | Contact | Home

Vibrio mimicus VM223, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - VMA_rna062 23S ribosomal RNA 1 410 1
rRNA - - VMA_rna063 5S ribosomal RNA 503 622 1
tRNA - - VMA_rna064 tRNA-Asp 652 728 1
CDS - ZP_06032767.1 VMA_001475 dienelactone hydrolase 899 1813 1
CDS - ZP_06032768.1 VMA_001476 NADPH-flavin oxidoreductase 2225 2947 1
CDS - ZP_06032769.1 VMA_001477 hypothetical protein 2984 4276 -1
CDS - ZP_06032770.1 VMA_001478 putative protease 4773 6113 -1
CDS - ZP_06032771.1 VMA_001479 DNA recombination-dependent growth factor C 6324 7238 -1
CDS - ZP_06032772.1 VMA_001480 phosphate regulon transcriptional regulatory protein PhoB 7675 8163 1
CDS - ZP_06032773.1 VMA_001481 phosphate regulon sensor protein phoR 8185 9486 1
CDS - ZP_06032774.1 VMA_001482 phosphate ABC transporter, periplasmic phosphate-binding protein PstS 9492 10460 1
CDS - ZP_06032775.1 VMA_001483 exopolyphosphatase 10535 12037 -1
CDS - ZP_06032776.1 VMA_001484 polyphosphate kinase 12018 14123 -1
CDS - ZP_06032777.1 VMA_001485 phosphate transport system permease protein PstC 14323 16518 1
CDS - ZP_06032778.1 VMA_001486 phosphate transport system permease protein PstA 16528 18174 1
CDS - ZP_06032779.1 VMA_001487 phosphate transport ATP-binding protein PstB 18177 18998 1
CDS - ZP_06032780.1 VMA_001488 phosphate transport system regulatory protein PhoU 19034 19744 1
CDS - ZP_06032781.1 VMA_001489 hypothetical protein 19762 20538 -1
CDS - ZP_06032782.1 VMA_001490 cytoplasmic copper homeostasis protein CutC 20582 21346 -1
CDS - ZP_06032783.1 VMA_001491 alkyl hydroperoxide reductase subunit C-like protein 21635 22240 -1
CDS - ZP_06032784.1 VMA_001492 transcriptional regulator LysR family 22484 23389 1
CDS - ZP_06032785.1 VMA_001493 malate synthase 23973 25610 1
CDS - ZP_06032786.1 VMA_001494 isocitrate lyase 25720 27033 1
CDS - ZP_06032787.1 VMA_001495 methyl-accepting chemotaxis protein 27134 29077 -1
CDS - ZP_06032788.1 VMA_001496 putative acetoin utilization protein AcuB 29291 29734 -1
CDS - ZP_06032789.1 VMA_001497 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 30008 31066 1
CDS - ZP_06032790.1 VMA_001498 tRNA-guanine transglycosylase 31295 32434 1
CDS - ZP_06032791.1 VMA_001499 preprotein translocase subunit YajC 32539 32871 1
CDS - ZP_06032792.1 VMA_001500 protein-export membrane protein SecD 32926 34746 1
CDS - ZP_06032793.1 VMA_001501 protein-export membrane protein SecF 34761 35708 1
CDS - ZP_06032794.1 VMA_001502 myo-inositol-1(or 4)-monophosphatase 35904 36707 -1
CDS - ZP_06032795.1 VMA_001503 tRNA:Cm32/Um32 methyltransferase 36885 37619 1
CDS - ZP_06032796.1 VMA_001504 iron-sulfur cluster regulator IscR 37773 38255 1
CDS - ZP_06032797.1 VMA_001505 cysteine desulfurase 38282 39496 1
CDS - ZP_06032798.1 VMA_001506 iron-sulfur cluster assembly scaffold protein IscU 39533 39916 1
CDS - ZP_06032799.1 VMA_001507 iron binding protein IscA for iron-sulfur cluster assembly 40088 40300 1
CDS - ZP_06032800.1 VMA_001508 chaperone protein HscB 40583 40864 1
CDS - ZP_06032801.1 VMA_001509 chaperone protein HscA 41020 42738 1
CDS - ZP_06032802.1 VMA_001510 ferredoxin 2Fe-2S 42752 43090 1
CDS - ZP_06032803.1 VMA_001511 hypothetical protein 43139 43333 1
CDS - ZP_06032804.1 VMA_001512 peptidase B 43491 44780 1
CDS - ZP_06032805.1 VMA_001513 nucleoside diphosphate kinase 44984 45412 1
CDS - ZP_06032806.1 VMA_001514 ribosomal RNA large subunit methyltransferase N 45573 46694 1
CDS - ZP_06032807.1 VMA_001515 hypothetical protein 46960 48015 1
CDS - ZP_06032808.1 VMA_001516 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 48074 49150 1
CDS - ZP_06032809.1 VMA_001517 histidyl-tRNA synthetase 49176 50444 1
CDS - ZP_06032810.1 VMA_001518 membrane protein 50482 51096 1
CDS - ZP_06032811.1 VMA_001519 YfgL protein 51109 52269 1
CDS - ZP_06032812.1 VMA_001520 GTP-binding protein EngA 52467 53951 1
CDS - ZP_06032813.1 VMA_001521 predicted metal-dependent hydrolase 54006 54875 1
CDS - ZP_06032814.1 VMA_001522 exodeoxyribonuclease VII large subunit 55409 56749 -1
CDS - ZP_06032815.1 VMA_001523 inosine-5'-monophosphate dehydrogenase 57102 58421 1
CDS - ZP_06032816.1 VMA_001524 GMP synthase [glutamine-hydrolyzing] 58607 60082 1
CDS - ZP_06032817.1 VMA_001525 chitinase 60319 62040 1
CDS - ZP_06032818.1 VMA_001526 hypothetical protein 62231 62824 1
CDS - ZP_06032819.1 VMA_001527 transcriptional regulator LysR family 63019 63942 1
CDS - ZP_06032820.1 VMA_001528 alkyl sulfatase 64045 66027 1
CDS - ZP_06032821.1 VMA_001529 sodium/alanine symporter 66113 67537 -1
CDS - ZP_06032822.1 VMA_001530 D-amino acid dehydrogenase small subunit 68039 69301 -1
CDS - ZP_06032823.1 VMA_001531 transcriptional regulator LysR family 69405 70304 1
CDS - ZP_06032824.1 VMA_001532 Kef-type K+ transport system predicted NAD-binding component 70691 71347 1
CDS - ZP_06032825.1 VMA_001533 Rtn protein 71821 73407 -1
CDS - ZP_06032826.1 VMA_001534 transcriptional regulatory protein CitB 73996 74679 -1
CDS - ZP_06032827.1 VMA_001535 sensor kinase CitA 74692 76392 -1
CDS - ZP_06032828.1 VMA_001536 oxaloacetate decarboxylase beta chain 76463 77764 -1
CDS - ZP_06032829.1 VMA_001537 oxaloacetate decarboxylase alpha chain 77780 79579 -1
CDS - ZP_06032830.1 VMA_001538 Na(+)/citrate symporter 79962 81017 -1
CDS - ZP_06032831.1 VMA_001539 [Citrate [pro-3S]-lyase] ligase 81585 82640 1
CDS - ZP_06032832.1 VMA_001540 citrate lyase beta chain 82799 82987 1
CDS - ZP_06032833.1 VMA_001541 citrate lyase beta chain 83074 83859 1
CDS - ZP_06032834.1 VMA_001542 citrate lyase alpha chain 83903 85399 1
CDS - ZP_06032835.1 VMA_001543 triphosphoribosyl-dephospho-CoA synthetase 85910 86854 1
CDS - ZP_06032836.1 VMA_001544 hypothetical protein 87372 87530 1
CDS - ZP_06032837.1 VMA_001545 RNA methyltransferase TrmH family 87667 88401 1
CDS - ZP_06032838.1 VMA_001546 ferredoxin 88550 88690 -1
CDS - ZP_06032839.1 VMA_001547 NAD(FAD)-utilizing dehydrogenase 89112 90728 1
CDS - ZP_06032840.1 VMA_001548 hypothetical protein 90796 91479 -1
CDS - ZP_06032841.1 VMA_001549 hypothetical protein 91751 92491 -1
CDS - ZP_06032842.1 VMA_001550 putative resolvase 92831 93475 1
CDS - ZP_06032843.1 VMA_001551 hypothetical protein 93623 93823 1
CDS - ZP_06032844.1 VMA_001552 hypothetical protein 95037 95213 1
CDS - ZP_06032845.1 VMA_001553 ribonuclease H 95747 95875 1
CDS - ZP_06032846.1 VMA_001554 integrase 95926 97719 -1
CDS - ZP_06032847.1 VMA_001555 tmRNA-binding protein SmpB 98206 98691 -1
CDS - ZP_06032848.1 VMA_001556 hypothetical protein 99312 99617 1
CDS - ZP_06032849.1 VMA_001557 DNA repair protein RecN 100212 101876 -1
CDS - ZP_06032850.1 VMA_001558 NAD kinase 102005 102889 -1
CDS - ZP_06032851.1 VMA_001559 heat shock protein GrpE 103035 103637 1
CDS - ZP_06032852.1 VMA_001560 chaperone protein DnaK 103891 105798 1
CDS - ZP_06032853.1 VMA_001561 chaperone protein DnaJ 105997 107142 1
CDS - ZP_06032854.1 VMA_001562 hypothetical protein 108857 110227 1
CDS - ZP_06032855.1 VMA_001563 type 4 fimbrial biogenesis protein PilV 110217 110630 1
CDS - ZP_06032856.1 VMA_001564 putative p-aminobenzoyl-glutamate transporter 111428 112681 1
CDS - ZP_06032857.1 VMA_001565 tRNA-specific adenosine-34 deaminase 113161 113316 1
CDS - ZP_06032858.1 VMA_001566 hypothetical protein 113359 113493 -1
CDS - ZP_06032859.1 VMA_001567 transglycosylase Slt family 113670 115250 -1
CDS - ZP_06032860.1 VMA_001568 phosphoribosylformylglycinamidine synthase 115667 119452 1
CDS - ZP_06032861.1 VMA_001569 hypothetical protein 119560 119715 -1
CDS - ZP_06032862.1 VMA_001570 hypothetical protein 119757 119960 -1
CDS - ZP_06032863.1 VMA_001571 hypothetical protein 120063 120380 -1