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Vibrio mimicus VM573, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05715349.1 VMD_03950 conserved hypothetical protein 101 556 1
CDS nusA ZP_05715350.1 VMD_03960 N utilization substance protein A 575 2062 1
CDS infB ZP_05715351.1 VMD_03970 translation initiation factor IF-2 2087 4783 1
CDS rbfA ZP_05715352.1 VMD_03980 ribosome-binding factor A 4885 5283 1
CDS truB ZP_05715353.1 VMD_03990 tRNA pseudouridine 55 synthase 5283 6221 1
CDS rpsO ZP_05715354.1 VMD_04000 30S ribosomal protein S15 6363 6632 1
CDS - ZP_05715355.1 VMD_04010 polyribonucleotide nucleotidyltransferase 6946 9075 1
CDS - ZP_05715356.1 VMD_04020 lipoprotein, putative 9190 10101 1
CDS - ZP_05715357.1 VMD_04030 transcriptional regulator, MarR family 10200 10607 1
CDS - ZP_05715358.1 VMD_04040 DNA-damage-inducible protein F 10655 11992 1
CDS - ZP_05715359.1 VMD_04050 predicted protease 12041 12919 -1
CDS - ZP_05715360.1 VMD_04060 putative protease 12932 13945 -1
CDS - ZP_05715361.1 VMD_04070 PAS domain S-box/GGDEF domain protein 14053 16107 -1
CDS - ZP_05715362.1 VMD_04080 predicted lipid carrier protein 16535 16954 1
CDS - ZP_05715363.1 VMD_04090 putative acetyltransferase 16938 17441 1
CDS holD ZP_05715364.1 VMD_04100 DNA polymerase III subunit psi 17583 17960 1
CDS rimI ZP_05715365.1 VMD_04110 ribosomal-protein-alanine acetyltransferase 17978 18406 1
CDS - ZP_05715366.1 VMD_04120 Hypothetical signaling protein 18395 20452 -1
CDS prfC ZP_05715367.1 VMD_04130 peptide chain release factor 3 20661 22250 1
CDS srmB ZP_05715368.1 VMD_04140 Superfamily II DNA and RNA helicase 22369 23619 -1
CDS - ZP_05715369.1 VMD_04150 conserved hypothetical protein 23710 24429 -1
CDS brnQ ZP_05715370.1 VMD_04160 branched chain amino acid transport system II carrier protein 24784 26052 1
CDS prfB ZP_05715371.1 VMD_04170 peptide chain release factor 2 26574 27320 1
CDS - ZP_05715372.1 VMD_04180 lysyl-tRNA synthetase 27346 28884 1
CDS - ZP_05715373.1 VMD_04190 sigma-54 dependent transcriptional regulator 29156 30490 1
CDS - ZP_05715374.1 VMD_04200 conserved hypothetical protein 31041 31292 1
CDS - ZP_05715375.1 VMD_04210 oxidoreductase Tas, aldo/keto reductase family 31329 32363 -1
CDS mutH ZP_05715376.1 VMD_04220 DNA mismatch repair protein MutH 32653 33318 -1
CDS - ZP_05715377.1 VMD_04230 dinucleoside polyphosphate hydrolase 33830 34525 1
CDS ptsP ZP_05715378.1 VMD_04240 Phosphoenolpyruvate-protein phosphotransferase ptsP 34528 36774 1
CDS - ZP_05715379.1 VMD_04250 conserved hypothetical protein 36784 37578 1
CDS - ZP_05715380.1 VMD_04260 prolipoprotein diacylglyceryl transferase 37607 38422 1
CDS thyA ZP_05715381.1 VMD_04270 thymidylate synthase 38432 39283 1
CDS nptA ZP_05715382.1 VMD_04280 nptA protein 39375 40526 -1
CDS nhaR ZP_05715383.1 VMD_04290 transcriptional activator protein NhaR 40918 41808 1
CDS hlyU ZP_05715384.1 VMD_04300 transcriptional activator HlyU 42031 42327 1
CDS rpsT ZP_05715385.1 VMD_04310 30S ribosomal protein S20 42426 42686 -1
CDS mviN ZP_05715386.1 VMD_04320 MviN protein 42944 44506 1
CDS ribF ZP_05715387.1 VMD_04330 Riboflavin biosynthesis protein 44575 45543 1
CDS ileS ZP_05715388.1 VMD_04340 isoleucyl-tRNA synthetase 45574 48423 1
CDS lspA ZP_05715389.1 VMD_04350 Lipoprotein signal peptidase 48439 48954 1
CDS fkpB ZP_05715390.1 VMD_04360 peptidyl-prolyl cis-trans isomerase, FKBP-type 49123 49557 1
CDS ispH ZP_05715391.1 VMD_04370 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 49592 50554 1
CDS - ZP_05715392.1 VMD_04380 carbon starvation protein A, putative 50684 52168 -1
CDS - ZP_05715393.1 VMD_04390 conserved hypothetical protein 52424 52747 1
CDS - ZP_05715394.1 VMD_04400 conserved hypothetical protein 52763 54562 1
CDS - ZP_05715395.1 VMD_04410 conserved hypothetical protein 54586 55509 -1
CDS - ZP_05715396.1 VMD_04420 conserved hypothetical protein 55527 56639 -1
CDS nagZ ZP_05715397.1 VMD_04430 beta-N-acetylhexosaminidase 56745 57737 1
CDS - ZP_05715398.1 VMD_04440 response regulator 57764 58477 -1
CDS - ZP_05715399.1 VMD_04450 conserved hypothetical protein 58487 60241 -1
CDS aroF ZP_05715400.1 VMD_04460 phospho-2-dehydro-3-deoxyheptonate aldolase 60406 61479 1
CDS tyrA ZP_05715401.1 VMD_04470 chorismate mutase/prephenate dehydrogenase 61492 62619 1
CDS - ZP_05715402.1 VMD_04480 conserved hypothetical protein 62669 63037 -1
CDS - ZP_05715403.1 VMD_04490 ABC transporter, ATP-binding protein 63272 64939 -1
CDS - ZP_05715404.1 VMD_04500 soluble lytic murein transglycosylase 65301 67247 1
CDS - ZP_05715405.1 VMD_04510 trp operon repressor, putative 67302 67601 1
CDS - ZP_05715406.1 VMD_04520 conserved hypothetical protein 67687 68142 -1
CDS - ZP_05715407.1 VMD_04530 c-di-GMP phosphodiesterase A-related protein 68159 70534 -1
CDS - ZP_05715408.1 VMD_04540 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein 70518 71597 -1
CDS pheA ZP_05715409.1 VMD_04550 Prephenate dehydratase 71740 72915 -1
CDS - ZP_05715410.1 VMD_04560 sigma-54 modulation protein, putative 73155 73481 -1
CDS - ZP_05715411.1 VMD_04570 putative lipoprotein 73894 74619 -1
CDS rluD ZP_05715412.1 VMD_04580 Ribosomal large subunit pseudouridine synthase D 74774 75748 1
CDS - ZP_05715413.1 VMD_04590 conserved hypothetical protein 75751 76473 1
CDS clpB ZP_05715414.1 VMD_04600 clpB protein 76598 79171 1
tRNA - - VMD_t05 tRNA-Glu 81277 81352 1
tRNA - - VMD_t06 tRNA-Asp 84784 84860 1
CDS - ZP_05715415.1 VMD_04610 adenosine deaminase 85221 86201 -1
CDS - ZP_05715416.1 VMD_04620 GGDEF family protein 86299 88824 -1
CDS ntrC ZP_05715417.1 VMD_04630 nitrogen regulation protein NR(I), response regulator 88884 90284 -1
CDS ntrB ZP_05715418.1 VMD_04640 nitrogen regulation protein rtrB (nitrogen regulator II, NRII), sensor kinase 90294 91352 -1
CDS - ZP_05715419.1 VMD_04650 conserved hypothetical protein 91489 92076 -1
CDS glnA ZP_05715420.1 VMD_04660 glutamine synthetase 92254 93723 -1
CDS typA ZP_05715421.1 VMD_04670 GTP-binding protein typA/bipA 94135 95979 1
CDS - ZP_05715422.1 VMD_04680 conserved hypothetical protein 96078 96608 1
CDS - ZP_05715423.1 VMD_04690 tRNA processing ribonuclease BN 96635 97564 1
CDS - ZP_05715424.1 VMD_04700 D-tyrosyl-tRNA deacylase 97536 97970 1
CDS - ZP_05715425.1 VMD_04710 conserved hypothetical protein 98043 98969 1
CDS - ZP_05715426.1 VMD_04720 conserved hypothetical protein 99005 100891 -1
CDS pckA ZP_05715427.1 VMD_04730 phosphoenolpyruvate carboxykinase 101031 102659 -1
CDS hslO ZP_05715428.1 VMD_04740 Hsp33-like chaperonin 102996 103886 -1
CDS - ZP_05715429.1 VMD_04750 conserved hypothetical protein 103912 104205 -1
CDS epsC ZP_05715430.1 VMD_04760 General secretion pathway protein C 104519 105433 1
CDS epsD ZP_05715431.1 VMD_04770 general secretion pathway protein D 105479 107506 1
CDS epsE ZP_05715432.1 VMD_04780 General secretion pathway protein E 107503 109014 1
CDS epsF ZP_05715433.1 VMD_04790 General secretion pathway protein F 109014 110234 1
CDS epsG ZP_05715434.1 VMD_04800 General secretion pathway protein G precursor 110284 110715 1
CDS epsH ZP_05715435.1 VMD_04810 General secretion pathway protein H precursor 110755 111339 1
CDS epsI ZP_05715436.1 VMD_04820 General secretion pathway protein I precursor 111329 111682 1
CDS epsJ ZP_05715437.1 VMD_04830 General secretion pathway protein J precursor 111669 112334 1
CDS epsK ZP_05715438.1 VMD_04840 General secretion pathway protein K 112324 113334 1
CDS epsL ZP_05715439.1 VMD_04850 General secretion pathway protein L 113363 114514 1
CDS epsM ZP_05715440.1 VMD_04860 General secretion pathway protein M 114524 115021 1
CDS epsN ZP_05715441.1 VMD_04870 General secretion pathway protein N 115023 115781 1
CDS cysQ ZP_05715442.1 VMD_04880 CysQ protein 115822 116649 -1
CDS nudE ZP_05715443.1 VMD_04890 ADP compounds hydrolase nudE 116672 117220 -1
CDS - ZP_05715444.1 VMD_04900 conserved hypothetical protein 117348 117935 -1
CDS - ZP_05715445.1 VMD_04910 ComF-related protein 118024 118884 -1
CDS bioH ZP_05715446.1 VMD_04920 Carboxylesterase bioH 118793 119581 1