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Vibrio mimicus VM573, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - VMD_t07 tRNA-His 77 152 1
tRNA - - VMD_t08 tRNA-Pro 214 290 1
CDS - ZP_05715567.1 VMD_06130 peptide ABC transporter, ATP-binding protein 1030 2745 1
CDS - ZP_05715568.1 VMD_06140 peptide ABC transporter, periplasmic peptide-binding protein 2839 4395 1
CDS - ZP_05715569.1 VMD_06150 peptide ABC transporter, permease protein 4551 5528 1
CDS - ZP_05715570.1 VMD_06160 peptide ABC transporter, permease protein 5531 6469 1
CDS - ZP_05715571.1 VMD_06170 hypothetical protein 6678 7160 1
CDS - ZP_05715572.1 VMD_06180 hypothetical protein 7174 7590 1
CDS - ZP_05715573.1 VMD_06190 glutathione-disulfide reductase 7670 9025 -1
CDS - ZP_05715574.1 VMD_06200 conserved hypothetical protein 9131 9970 -1
CDS prlC ZP_05715575.1 VMD_06210 oligopeptidase A 10249 11853 1
CDS - ZP_05715576.1 VMD_06220 Oligopeptidase A 11843 12292 1
CDS uvrD ZP_05715577.1 VMD_06230 DNA helicase II 12428 14032 1
CDS - ZP_05715578.1 VMD_06240 DNA helicase II 14029 14598 1
CDS - ZP_05715579.1 VMD_06250 conserved hypothetical protein 15296 15976 -1
CDS - ZP_05715580.1 VMD_06260 transcriptional regulator, AraC/XylS family 16051 16854 -1
CDS - ZP_05715581.1 VMD_06270 Gamma-glutamyltranspeptidase 17028 18794 -1
CDS rarD ZP_05715582.1 VMD_06280 rarD protein 18967 19875 -1
CDS recQ ZP_05715583.1 VMD_06290 ATP-dependent DNA helicase RecQ 20015 21877 1
CDS - ZP_05715584.1 VMD_06300 conserved hypothetical protein 21870 22169 1
CDS - ZP_05715585.1 VMD_06310 conserved hypothetical protein 22375 22905 1
CDS viuA ZP_05715586.1 VMD_06320 iron(III) compound receptor 23189 25288 1
CDS - ZP_05715587.1 VMD_06330 iron(III) ABC transporter, ATP-binding protein 25419 26204 1
CDS - ZP_05715588.1 VMD_06340 iron(III) ABC transporter, periplasmic iron-compound-binding protein 26195 27154 1
CDS - ZP_05715589.1 VMD_06350 iron(III) ABC transporter, permease protein 27151 29073 1
CDS yfeT ZP_05715590.1 VMD_06360 conserved hypothetical protein 29140 29988 -1
CDS - ZP_05715591.1 VMD_06370 conserved hypothetical protein 30219 31121 1
CDS - ZP_05715592.1 VMD_06380 Phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific 31152 32597 1
CDS - ZP_05715593.1 VMD_06390 conserved hypothetical protein 32739 33227 -1
CDS - ZP_05715594.1 VMD_06400 hypothetical protein 33427 33651 -1
CDS - ZP_05715595.1 VMD_06410 putative excisionase 33652 33936 -1
CDS - ZP_05715596.1 VMD_06420 superfamily II helicase 33933 35627 -1
CDS - ZP_05715597.1 VMD_06430 hypothetical protein 35896 36687 1
CDS - ZP_05715598.1 VMD_06440 hypothetical protein 36680 37618 1
CDS - ZP_05715599.1 VMD_06450 DNA methylase N-4/N-6 domain protein 37657 39798 1
CDS - ZP_05715600.1 VMD_06460 conserved hypothetical protein 39801 42401 1
CDS - ZP_05715601.1 VMD_06470 Helix-turn-helix domain protein 42475 43563 -1
CDS - ZP_05715602.1 VMD_06480 hypothetical protein 43569 44165 -1
CDS - ZP_05715603.1 VMD_06490 hypothetical protein 44765 45352 1
CDS - ZP_05715604.1 VMD_06500 hypothetical protein 46008 46721 1
CDS - ZP_05715605.1 VMD_06510 Integrase 48389 49594 -1
CDS - ZP_05715606.1 VMD_06520 conserved hypothetical protein 49779 50666 -1
CDS - ZP_05715607.1 VMD_06530 ribonuclease PH 50809 51525 1
CDS pyrE ZP_05715608.1 VMD_06540 orotate phosphoribosyltransferase 51724 52365 1
CDS msbB ZP_05715609.1 VMD_06550 lipid A biosynthesis lauroyl acyltransferase 52451 53428 -1
CDS htrB ZP_05715610.1 VMD_06560 lipid A biosynthesis lauroyl acyltransferase 53447 54394 -1
CDS slmA ZP_05715611.1 VMD_06570 HTH-type protein slmA 54400 55080 -1
CDS coaB ZP_05715612.1 VMD_06580 phosphopantothenoylcysteine synthase/decarboxylase 55152 56363 -1
CDS - ZP_05715613.1 VMD_06590 Methyl-accepting chemotaxis protein 56537 58231 1
CDS radC ZP_05715614.1 VMD_06600 DNA repair protein RadC 58343 59017 1
CDS rpmB ZP_05715615.1 VMD_06610 ribosomal protein L28 59312 59548 1
CDS - ZP_05715616.1 VMD_06620 conserved hypothetical protein 59911 60393 1
CDS mutM ZP_05715617.1 VMD_06630 formamidopyrimidine-DNA glycosylase 60403 61212 1
CDS coaD ZP_05715618.1 VMD_06640 phosphopantetheine adenylyltransferase 61061 61804 -1
CDS - ZP_05715619.1 VMD_06650 conserved hypothetical protein 61915 62952 1
CDS - ZP_05715620.1 VMD_06660 glycosyl transferase, group 2 63032 63811 -1
CDS - ZP_05715621.1 VMD_06670 lipopolysaccharide biosynthesis protein 63880 64947 -1
CDS kdkA ZP_05715622.1 VMD_06680 3-deoxy-D-manno-octulosonic acid kinase 65020 65775 1
CDS - ZP_05715623.1 VMD_06690 hypothetical protein 65779 66738 1
CDS - ZP_05715624.1 VMD_06700 conserved hypothetical protein 66742 67671 -1
CDS - ZP_05715625.1 VMD_06710 Capsular polysaccharide biosynthesis protein, BcbE, predicted 67668 68411 -1
CDS - ZP_05715626.1 VMD_06720 capsular polysaccharide biosynthesis protein 68408 69991 -1
CDS - ZP_05715627.1 VMD_06730 conserved hypothetical protein 69982 70362 -1
CDS kdtA ZP_05715628.1 VMD_06740 3-deoxy-D-manno-octulosonic-acid transferase 70359 71639 -1
CDS - ZP_05715629.1 VMD_06750 conserved hypothetical protein 71639 72427 -1
CDS opsX ZP_05715630.1 VMD_06760 Putative glycosyltransferase 72424 73473 -1
CDS rfaF ZP_05715631.1 VMD_06770 ADP-heptose--LPS heptosyltransferase II 73470 74507 -1
CDS - ZP_05715632.1 VMD_06780 conserved hypothetical protein 74507 75706 -1
CDS - ZP_05715633.1 VMD_06790 acetyltranferase, putative 75708 75959 -1
CDS - ZP_05715634.1 VMD_06800 conserved hypothetical protein 76282 78054 -1
CDS rfaD ZP_05715635.1 VMD_06810 ADP-L-glycero-D-mannoheptose-6-epimerase 78154 79098 -1
CDS - ZP_05715636.1 VMD_06820 glycosyltransferase 80656 81885 1
CDS - ZP_05715637.1 VMD_06830 glycosyltransferase 81903 83720 1
CDS rfbA ZP_05715638.1 VMD_06840 O-antigen export system permease protein rfbA 83759 84553 1
CDS abcA ZP_05715639.1 VMD_06850 ABC transporter protein abcA 84543 85823 1
CDS capD ZP_05715640.1 VMD_06860 UDP-glucose 4-epimerase 87911 88948 1
CDS - ZP_05715641.1 VMD_06870 dTDP-4-dehydrorhamnose reductase 88948 89820 1
CDS wecB ZP_05715642.1 VMD_06880 Putative UDP-N-acetylglucosamine 2-epimerase 89817 90950 1
CDS - ZP_05715643.1 VMD_06890 probable glycosyltransferase 90932 92164 1
CDS - ZP_05715644.1 VMD_06900 Probable acetyltransferase 92203 94149 1
CDS - ZP_05715645.1 VMD_06910 glycosyltransferase related 94162 94794 1
CDS - ZP_05715646.1 VMD_06920 conserved hypothetical protein 94985 97414 1
CDS - ZP_05715647.1 VMD_06930 conserved hypothetical protein 97407 98402 1
CDS - ZP_05715648.1 VMD_06940 Capsular polysaccharide biosynthesis protein capD 100201 101172 -1
CDS - ZP_05715649.1 VMD_06950 Capsular polysaccharide biosynthesis protein capD 101217 102074 -1
CDS - ZP_05715650.1 VMD_06960 UDP-glucose 4-epimerase 102227 103198 1
CDS - ZP_05715651.1 VMD_06970 galactosyl-transferase, putative 103377 103760 1
CDS - ZP_05715652.1 VMD_06980 hypothetical protein 103811 104587 -1
CDS - ZP_05715653.1 VMD_06990 hypothetical protein 104868 107075 -1
CDS - ZP_05715654.1 VMD_07000 hypothetical protein 107072 107842 -1
CDS - ZP_05715655.1 VMD_07010 lipoprotein, putative 107844 108533 -1
CDS gfcA ZP_05715656.1 VMD_07020 Threonine-rich inner membrane protein gfcA 108598 108873 -1
CDS gfcE ZP_05715657.1 VMD_07030 Putative polysaccharide export protein gfcE 109319 110461 1
CDS - ZP_05715658.1 VMD_07040 Putative low molecular weight protein-tyrosine-phosphatase 110614 111054 1
CDS amsA ZP_05715659.1 VMD_07050 Putative tyrosine-protein kinase amsA 111133 113301 1
CDS - ZP_05715660.1 VMD_07060 conserved hypothetical protein 113605 114636 1
CDS - ZP_05715661.1 VMD_07070 hypothetical protein 114987 116345 1
CDS - ZP_05715662.1 VMD_07080 hypothetical protein 117324 118469 1
CDS - ZP_05715663.1 VMD_07090 Putative glycosyltransferase 118471 119229 1
CDS - ZP_05715664.1 VMD_07100 glycosyltransferase 119229 120146 1