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Vibrio mimicus VM573, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - VMD_t09 tRNA-Gly 60 135 -1
tRNA - - VMD_t10 tRNA-Gly 171 246 -1
CDS - ZP_05715724.1 VMD_07700 oligoribonuclease 405 950 -1
CDS rsgA ZP_05715725.1 VMD_07710 ribosome small subunit-dependent GTPase A 1076 2137 1
CDS - ZP_05715726.1 VMD_07720 phosphatidylserine decarboxylase 2233 3090 1
CDS - ZP_05715727.1 VMD_07730 transporter, putative 3250 4665 1
CDS - ZP_05715728.1 VMD_07740 conserved hypothetical protein 4817 5704 1
CDS yibO ZP_05715729.1 VMD_07750 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 5847 7379 1
CDS - ZP_05715730.1 VMD_07760 peptidase family protein 7544 8692 1
CDS - ZP_05715731.1 VMD_07770 conserved hypothetical protein 8689 9648 -1
CDS - ZP_05715732.1 VMD_07780 transcriptional reguator, TetR family 9735 10373 -1
CDS hemE ZP_05715733.1 VMD_07790 uroporphyrinogen decarboxylase 10466 11536 -1
CDS nudC ZP_05715734.1 VMD_07800 NADH pyrophosphatase 11792 12202 -1
CDS - ZP_05715735.1 VMD_07810 NADH pyrophosphatase 12252 12569 -1
CDS - ZP_05715736.1 VMD_07820 regulator of sigma D 12747 13241 1
CDS rpoC ZP_05715737.1 VMD_07830 DNA-directed RNA polymerase beta' subunit 13354 17559 -1
CDS rpoB ZP_05715738.1 VMD_07840 DNA-directed RNA polymerase beta subunit 17665 21792 -1
CDS rplL ZP_05715739.1 VMD_07850 50S ribosomal protein L7/L12 21931 22299 -1
CDS rplJ ZP_05715740.1 VMD_07860 50S ribosomal protein L10 22366 22854 -1
CDS rplA ZP_05715741.1 VMD_07870 50S ribosomal protein L1 23125 23826 -1
CDS rplK ZP_05715742.1 VMD_07880 50S ribosomal protein L11 23831 24259 -1
CDS nusG ZP_05715743.1 VMD_07890 transcription antitermination protein NusG 24390 24938 -1
CDS secE ZP_05715744.1 VMD_07900 translocase 24954 25334 -1
CDS tufA ZP_05715745.1 VMD_07910 elongation factor TU 25558 26916 -1
tRNA - - VMD_t11 tRNA-Thr 26856 26931 -1
tRNA - - VMD_t12 tRNA-Gly 26945 27019 -1
tRNA - - VMD_t13 tRNA-Tyr 27055 27139 -1
tRNA - - VMD_t14 tRNA-Thr 27175 27250 -1
tRNA - - VMD_t15 tRNA-Asn 27280 27355 -1
tRNA - - VMD_t16 tRNA-Thr 27375 27450 -1
tRNA - - VMD_t17 tRNA-Phe 27493 27568 -1
CDS - ZP_05715746.1 VMD_07920 methyl-accepting chemotaxis protein 27872 29497 -1
tRNA - - VMD_t18 tRNA-Asn 29756 29831 -1
tRNA - - VMD_t19 tRNA-Phe 29847 29922 -1
tRNA - - VMD_t20 tRNA-Thr 29933 30008 -1
tRNA - - VMD_t21 tRNA-Phe 30057 30132 -1
CDS - ZP_05715747.1 VMD_07930 membrane-bound lytic murein transglycosylase C 30242 31432 -1
CDS - ZP_05715748.1 VMD_07940 conserved hypothetical protein 31471 31743 -1
CDS mutY ZP_05715749.1 VMD_07950 A/G-specific adenine glycosylase 31757 32866 -1
CDS trmB ZP_05715750.1 VMD_07960 tRNA (guanine-N(7)-)-methyltransferase 33058 33777 1
CDS - ZP_05715751.1 VMD_07970 glutaminase 33888 34808 1
CDS - ZP_05715752.1 VMD_07980 DNA-3-methyladenine glycosylase 1 34858 35484 1
CDS - ZP_05715753.1 VMD_07990 oxygen-independent coproporphyrinogen III oxidase, putative 35477 36661 -1
CDS - ZP_05715754.1 VMD_08000 HAM1 protein 36655 37257 -1
CDS - ZP_05715755.1 VMD_08010 conserved hypothetical protein 37343 37774 -1
CDS - ZP_05715756.1 VMD_08020 conserved hypothetical protein 37868 38161 -1
CDS - ZP_05715757.1 VMD_08030 predicted inner membrane protein 38161 38718 -1
CDS proC ZP_05715758.1 VMD_08040 pyrroline-5-carboxylate reductase 38776 39594 -1
CDS - ZP_05715759.1 VMD_08050 conserved hypothetical protein 39649 40359 -1
CDS pilT ZP_05715760.1 VMD_08060 twitching motility protein PilT 40385 41422 1
CDS pilU ZP_05715761.1 VMD_08070 twitching motility protein 41437 42543 1
CDS - ZP_05715762.1 VMD_08080 transcriptional regulator, LuxR family 42665 43024 1
CDS - ZP_05715763.1 VMD_08090 transcriptional regulator, LuxR family 43026 43463 1
CDS tyrS ZP_05715764.1 VMD_08100 tyrosyl-tRNA synthetase 43572 44852 1
CDS - ZP_05715765.1 VMD_08110 Holliday junction resolvase-like protein 44892 45314 -1
CDS - ZP_05715766.1 VMD_08120 conserved hypothetical protein 45396 45959 -1
CDS gshB ZP_05715767.1 VMD_08130 glutathione synthetase 45995 46951 -1
CDS - ZP_05715768.1 VMD_08140 conserved hypothetical protein 46965 47696 -1
CDS - ZP_05715769.1 VMD_08150 extracellular deoxyribonuclease 47835 48530 -1
CDS - ZP_05715770.1 VMD_08160 conserved hypothetical protein 48658 49146 -1
CDS metK ZP_05715771.1 VMD_08170 S-adenosylmethionine synthetase 49257 50414 -1
CDS - ZP_05715772.1 VMD_08180 Transketolase 1 50744 52741 1
CDS - ZP_05715773.1 VMD_08190 conserved hypothetical protein 53374 55926 1
CDS abrB ZP_05715774.1 VMD_08200 Protein abrB 56149 57192 -1
CDS - ZP_05715775.1 VMD_08210 conserved hypothetical protein 57275 57799 -1
CDS serA ZP_05715776.1 VMD_08220 D-3-phosphoglycerate dehydrogenase 57986 58942 -1
CDS - ZP_05715777.1 VMD_08230 conserved hypothetical protein 58920 59672 -1
CDS - ZP_05715778.1 VMD_08240 conserved hypothetical protein 59707 60228 -1
CDS - ZP_05715779.1 VMD_08250 conserved hypothetical protein 60238 60783 -1
CDS - ZP_05715780.1 VMD_08260 MutT/nudix family protein 60927 61364 -1
CDS glpM ZP_05715781.1 VMD_08270 Membrane protein glpM 61394 61744 -1
CDS - ZP_05715782.1 VMD_08280 conserved hypothetical protein 62009 62728 1
CDS - ZP_05715783.1 VMD_08290 transcriptional regulator, LysR family 62738 63670 1
CDS - ZP_05715784.1 VMD_08300 conserved hypothetical protein 63678 63968 -1
CDS - ZP_05715785.1 VMD_08310 oxygen-insensitive NAD(P)H nitroreductase 63972 64625 -1
CDS - ZP_05715786.1 VMD_08320 transporter, AcrB/D/F family 64861 68019 -1
CDS - ZP_05715787.1 VMD_08330 HlyD family secretion protein 68021 69028 -1
CDS - ZP_05715788.1 VMD_08340 conserved hypothetical protein 69134 69592 -1
CDS - ZP_05715789.1 VMD_08350 conserved hypothetical protein 69603 69947 -1
CDS - ZP_05715790.1 VMD_08360 transcriptional regulator, ArsR family 70039 70356 -1
CDS - ZP_05715791.1 VMD_08370 Coenzyme A disulfide reductase 70764 72467 1
CDS ptxR ZP_05715792.1 VMD_08380 HTH-type transcriptional regulator ptxR 72676 73536 -1
CDS - ZP_05715793.1 VMD_08390 putative secretion protein 73624 74700 1
CDS - ZP_05715794.1 VMD_08400 conserved hypothetical protein 74709 75725 1
CDS - ZP_05715795.1 VMD_08410 conserved hypothetical protein 75840 76220 -1
CDS - ZP_05715796.1 VMD_08420 conserved hypothetical protein 76344 78089 -1
CDS - ZP_05715797.1 VMD_08430 conserved hypothetical protein 78089 78544 -1
CDS - ZP_05715798.1 VMD_08440 conserved hypothetical protein 78548 78991 -1
CDS - ZP_05715799.1 VMD_08450 conserved hypothetical protein 79002 79748 -1
CDS - ZP_05715800.1 VMD_08460 hypothetical protein 80064 80288 -1
CDS - ZP_05715801.1 VMD_08470 hypothetical protein 80356 81489 -1
CDS - ZP_05715802.1 VMD_08480 hypothetical protein 81577 82245 -1
CDS - ZP_05715803.1 VMD_08490 hypothetical protein 82318 82569 1
CDS glpD ZP_05715804.1 VMD_08500 aerobic glycerol-3-phosphate dehydrogenase 83008 84546 1
CDS - ZP_05715805.1 VMD_08510 methyl-accepting chemotaxis protein 84652 86214 -1
CDS ompA ZP_05715806.1 VMD_08520 Outer membrane protein A 86419 87060 -1
CDS - ZP_05715807.1 VMD_08530 peptidyl-prolyl cis-trans isomerase 87255 87758 1
CDS - ZP_05715808.1 VMD_08540 haloacid dehalogenase/epoxide hydrolase family protein 87805 88443 -1
CDS - ZP_05715809.1 VMD_08550 methyl-accepting chemotaxis protein 88592 90358 1
CDS dcuC ZP_05715810.1 VMD_08560 Probable anaerobic C4-dicarboxylate transporter dcuC 90694 91314 1